RNA–Protein interactions for RNA: ENST00000319170.9

RAPH1-202, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPH1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-202ENST00000319170 LIFP15018 202 aa12.32□□□□□ -0.44
RAPH1-202ENST00000319170 ZIC1Q15915 447 aa12.32□□□□□ -0.44
RAPH1-202ENST00000319170 LRRC75BQ2VPJ9 315 aa12.32□□□□□ -0.44
RAPH1-202ENST00000319170 TRAV8-7A0A075B6U6 113 aa12.32□□□□□ -0.44
RAPH1-202ENST00000319170 HSPB9Q9BQS6 159 aa12.32□□□□□ -0.44
RAPH1-202ENST00000319170 SBF1O95248 1867 aa12.31□□□□□ -0.44
RAPH1-202ENST00000319170 PPP1R17O96001 155 aa12.31□□□□□ -0.44
RAPH1-202ENST00000319170 ZBTB34Q8NCN2 500 aa12.31□□□□□ -0.44
RAPH1-202ENST00000319170 LSM10Q969L4 123 aaKnown RBP12.31□□□□□ -0.44
RAPH1-202ENST00000319170 COL5A3P25940 1745 aaPredicted RBP12.31□□□□□ -0.44
RAPH1-202ENST00000319170 CLDN14O95500 239 aa12.31□□□□□ -0.44
RAPH1-202ENST00000319170 SGK494Q96LW2 274 aa12.31□□□□□ -0.44
RAPH1-202ENST00000319170 VN1R4Q7Z5H5 301 aa12.31□□□□□ -0.44
RAPH1-202ENST00000319170 GBF1Q92538 1859 aa12.31□□□□□ -0.44
RAPH1-202ENST00000319170 C21orf140B9A014 251 aa12.31□□□□□ -0.44
RAPH1-202ENST00000319170 HMGA2P52926 109 aa12.31□□□□□ -0.44
RAPH1-202ENST00000319170 ERVFRD-1P60508 538 aa12.31□□□□□ -0.44
RAPH1-202ENST00000319170 SGMS2Q8NHU3 365 aa12.31□□□□□ -0.44
RAPH1-202ENST00000319170 WDR25Q64LD2 544 aaPredicted RBP12.31□□□□□ -0.44
RAPH1-202ENST00000319170 CDX2Q99626 313 aaPredicted RBP12.31□□□□□ -0.44
RAPH1-202ENST00000319170 RBM11P57052 281 aaKnown RBP12.31□□□□□ -0.44
RAPH1-202ENST00000319170 MGAT2Q10469 447 aa12.31□□□□□ -0.44
RAPH1-202ENST00000319170 ALG14Q96F25 216 aa12.31□□□□□ -0.44
RAPH1-202ENST00000319170 GCSAMLQ5JQS6 135 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 LSMEM1Q8N8F7 131 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 TPRP12270 2363 aaKnown RBP12.3□□□□□ -0.44
RAPH1-202ENST00000319170 GAGE10A6NGK3 116 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 TSPAN13O95857 204 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 FAM106CPP0CH98 169 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 BCL2P10415 239 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 TTC32Q5I0X7 151 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 INO80CQ6PI98 192 aaPredicted RBP12.3□□□□□ -0.44
RAPH1-202ENST00000319170 RBKSQ9H477 322 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 YBX2Q9Y2T7 364 aaKnown RBP12.3□□□□□ -0.44
RAPH1-202ENST00000319170 KLRB1Q12918 225 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 ADAMTS17Q8TE56 1095 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 J3QT63 122 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 LMX1BO60663 402 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 DSPPQ9NZW4 1301 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 C16orf97H3BN30 126 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 PRDX2P32119 198 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 EMP1P54849 157 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 ZNF345Q14585 488 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 HSPB7Q9UBY9 170 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 WNT9BO14905 357 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 IBA57Q5T440 356 aaKnown RBP12.3□□□□□ -0.44
RAPH1-202ENST00000319170 H1FOOQ8IZA3 346 aaPredicted RBP12.3□□□□□ -0.44
RAPH1-202ENST00000319170 TIMP4Q99727 224 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 WIPI2Q9Y4P8 454 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 ATP6V0CP27449 155 aa12.3□□□□□ -0.44
RAPH1-202ENST00000319170 DOCK9Q9BZ29 2069 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 BGLAPP02818 100 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 FREM3P0C091 2139 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 CD81P60033 236 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 MDKP21741 143 aaPredicted RBP12.29□□□□□ -0.44
RAPH1-202ENST00000319170 EFNB2P52799 333 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 TFF2Q03403 129 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 NPIPB6E9PJ23 425 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 NAT2P11245 290 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 HINT1P49773 126 aaPredicted RBP12.29□□□□□ -0.44
RAPH1-202ENST00000319170 ZNF488Q96MN9 340 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 NEU1Q99519 415 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 HPRT1P00492 218 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 TMEM136Q6ZRR5 245 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 METTL1Q9UBP6 276 aaKnown RBP12.29□□□□□ -0.44
RAPH1-202ENST00000319170 CIRBPQ14011 172 aaKnown RBP12.29□□□□□ -0.44
RAPH1-202ENST00000319170 MIXL1Q9H2W2 232 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 CDC42EP3Q9UKI2 254 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 LHX8Q68G74 356 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 MAP1LC3AQ9H492 121 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 MRPS18BQ9Y676 258 aaKnown RBP12.29□□□□□ -0.44
RAPH1-202ENST00000319170 C1orf185Q5T7R7 199 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 NUP37Q8NFH4 326 aa12.29□□□□□ -0.44
RAPH1-202ENST00000319170 TAF1LQ8IZX4 1826 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 A8MWL6 223 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 NDUFB4O95168 129 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 CDS2O95674 445 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 FCGR3AP08637 254 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 FBXW9Q5XUX1 488 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 CHRNA10Q9GZZ6 450 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 IGKV3OR2-268A0A0C4DH90 116 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 TMEM56-RWDD3S4R434 201 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 DRD3P35462 400 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 CLEC2AQ6UVW9 174 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 PRSS27Q9BQR3 290 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 HBZP02008 142 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 PRF1P14222 555 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 GGTLC2Q14390 218 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 HCP5Q6MZN7 132 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 OVCH2Q7RTZ1 564 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 OR2V2Q96R30 315 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 NUDT16L1Q9BRJ7 211 aaKnown RBP12.28□□□□□ -0.44
RAPH1-202ENST00000319170 COL25A1Q9BXS0 654 aaPredicted RBP12.28□□□□□ -0.44
RAPH1-202ENST00000319170 IGHV4-34P06331 123 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 ARL14EPLP0DKL9 152 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 C9orf40Q8IXQ3 194 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 GUCD1Q96NT3 240 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 TTTY12Q9BZ98 90 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 CABIN1Q9Y6J0 2220 aa12.28□□□□□ -0.44
RAPH1-202ENST00000319170 TSPAN2O60636 221 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms