RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 RNF115Q9Y4L5 304 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 IGHV2OR16-5A0A0B4J2B6 119 aa11.91□□□□□ -0.5
VRK3-201ENST00000316763 C3orf80F5H4A9 247 aa11.91□□□□□ -0.5
VRK3-201ENST00000316763 HAND1O96004 215 aa11.91□□□□□ -0.5
VRK3-201ENST00000316763 NFYBP25208 207 aa11.91□□□□□ -0.5
VRK3-201ENST00000316763 LMO1P25800 156 aa11.91□□□□□ -0.5
VRK3-201ENST00000316763 ALKBH6Q3KRA9 238 aa11.91□□□□□ -0.5
VRK3-201ENST00000316763 ATP5SQ99766 215 aa11.91□□□□□ -0.5
VRK3-201ENST00000316763 SCRT1Q9BWW7 348 aa11.91□□□□□ -0.5
VRK3-201ENST00000316763 CXXC4Q9H2H0 198 aa11.91□□□□□ -0.5
VRK3-201ENST00000316763 PPP1R3CQ9UQK1 317 aa11.91□□□□□ -0.5
VRK3-201ENST00000316763 TRAV39A0A0B4J263 110 aa11.9□□□□□ -0.5
VRK3-201ENST00000316763 TMEM30CPA0ZSE6 113 aa11.9□□□□□ -0.5
VRK3-201ENST00000316763 C16orf97H3BN30 126 aa11.9□□□□□ -0.5
VRK3-201ENST00000316763 NXPH3O95157 252 aa11.9□□□□□ -0.5
VRK3-201ENST00000316763 TMEM50AO95807 157 aa11.9□□□□□ -0.5
VRK3-201ENST00000316763 IFNA5P01569 189 aa11.9□□□□□ -0.5
VRK3-201ENST00000316763 CEACAM6P40199 344 aa11.9□□□□□ -0.5
VRK3-201ENST00000316763 AVPI1Q5T686 147 aa11.9□□□□□ -0.5
VRK3-201ENST00000316763 C22orf34Q6ZV56 151 aa11.9□□□□□ -0.5
VRK3-201ENST00000316763 TMEM217Q8N7C4 229 aa11.9□□□□□ -0.5
VRK3-201ENST00000316763 TMEM171Q8WVE6 324 aa11.9□□□□□ -0.5
VRK3-201ENST00000316763 SLC35B3Q9H1N7 401 aa11.9□□□□□ -0.5
VRK3-201ENST00000316763 KCNJ16Q9NPI9 418 aa11.9□□□□□ -0.5
VRK3-201ENST00000316763 OR14J1Q9UGF5 321 aa11.9□□□□□ -0.5
VRK3-201ENST00000316763 H0YL77 283 aa11.9□□□□□ -0.51
VRK3-201ENST00000316763 CHRNB4P30926 498 aa11.9□□□□□ -0.51
VRK3-201ENST00000316763 MPV17P39210 176 aa11.9□□□□□ -0.51
VRK3-201ENST00000316763 SULT1A1P50225 295 aa11.9□□□□□ -0.51
VRK3-201ENST00000316763 PAX9P55771 341 aa11.9□□□□□ -0.51
VRK3-201ENST00000316763 RAB2AP61019 212 aa11.9□□□□□ -0.51
VRK3-201ENST00000316763 AKR1C8PQ5T2L2 129 aa11.9□□□□□ -0.51
VRK3-201ENST00000316763 DPPA3Q6W0C5 159 aa11.9□□□□□ -0.51
VRK3-201ENST00000316763 C1orf174Q8IYL3 243 aa11.9□□□□□ -0.51
VRK3-201ENST00000316763 HES4Q9HCC6 221 aa11.9□□□□□ -0.51
VRK3-201ENST00000316763 WSB1Q9Y6I7 421 aa11.9□□□□□ -0.51
VRK3-201ENST00000316763 PRR14LQ5THK1 2151 aa11.89□□□□□ -0.51
VRK3-201ENST00000316763 A0A0G2JRQ6 117 aa11.89□□□□□ -0.51
VRK3-201ENST00000316763 ZG16O60844 167 aa11.89□□□□□ -0.51
VRK3-201ENST00000316763 ZNF16P17020 682 aaPredicted RBP11.89□□□□□ -0.51
VRK3-201ENST00000316763 PAX6P26367 422 aa11.89□□□□□ -0.51
VRK3-201ENST00000316763 CDSNQ15517 529 aa11.89□□□□□ -0.51
VRK3-201ENST00000316763 AKIRIN2Q53H80 203 aa11.89□□□□□ -0.51
VRK3-201ENST00000316763 SLC25A24Q6NUK1 477 aa11.89□□□□□ -0.51
VRK3-201ENST00000316763 ODF3L1Q8IXM7 274 aa11.89□□□□□ -0.51
VRK3-201ENST00000316763 C15orf54Q8N8G6 183 aa11.89□□□□□ -0.51
VRK3-201ENST00000316763 ZBTB34Q8NCN2 500 aa11.89□□□□□ -0.51
VRK3-201ENST00000316763 BCL2L14Q9BZR8 327 aa11.89□□□□□ -0.51
VRK3-201ENST00000316763 RPS10P5Q9NQ39 176 aa11.89□□□□□ -0.51
VRK3-201ENST00000316763 CACNG5Q9UF02 275 aa11.89□□□□□ -0.51
VRK3-201ENST00000316763 TXNL1O43396 289 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 SYNGR2O43760 224 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 TIMM8AO60220 97 aaPredicted RBP11.88□□□□□ -0.51
VRK3-201ENST00000316763 IGLV2-14P01704 120 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 PLA2G2AP14555 144 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 PPP1CCP36873 323 aaKnown RBP11.88□□□□□ -0.51
VRK3-201ENST00000316763 ZNF83P51522 516 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 TAS2R30P59541 319 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 TLE4Q04727 773 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 ZNF718Q3SXZ3 478 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 SLC35E4Q6ICL7 350 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 SSX8Q7RTT4 187 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 RXFP4Q8TDU9 374 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 GALMQ96C23 342 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 FBXO7Q9Y3I1 522 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 OOEPA6NGQ2 149 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 A6NLC8 198 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 M0R036 132 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 HBE1P02100 147 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 KITLGP21583 273 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 GCH1P30793 250 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 IL2RGP31785 369 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 MZT1Q08AG7 82 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 DRAM1Q8N682 238 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 SCGB1C1Q8TD33 95 aa11.88□□□□□ -0.51
VRK3-201ENST00000316763 SAV1Q9H4B6 383 aaPredicted RBP11.88□□□□□ -0.51
VRK3-201ENST00000316763 UNKLQ9H9P5 680 aaKnown RBP11.88□□□□□ -0.51
VRK3-201ENST00000316763 IGHV3-64DA0A0J9YX35 117 aa11.87□□□□□ -0.51
VRK3-201ENST00000316763 A0A1B0GV50 99 aa11.87□□□□□ -0.51
VRK3-201ENST00000316763 RBFOX3A6NFN3 312 aa11.87□□□□□ -0.51
VRK3-201ENST00000316763 KIAA1324LA8MWY0 1029 aaPredicted RBP11.87□□□□□ -0.51
VRK3-201ENST00000316763 M0R1B8 84 aa11.87□□□□□ -0.51
VRK3-201ENST00000316763 MLNRO43193 412 aa11.87□□□□□ -0.51
VRK3-201ENST00000316763 IGKV1-39P01597 117 aa11.87□□□□□ -0.51
VRK3-201ENST00000316763 IGKV1D-39P04432 117 aa11.87□□□□□ -0.51
VRK3-201ENST00000316763 FBXL19-AS1Q494R0 122 aa11.87□□□□□ -0.51
VRK3-201ENST00000316763 CA5BP1Q8WTZ4 195 aa11.87□□□□□ -0.51
VRK3-201ENST00000316763 ITLN2Q8WWU7 325 aaPredicted RBP11.87□□□□□ -0.51
VRK3-201ENST00000316763 PSENENQ9NZ42 101 aa11.87□□□□□ -0.51
VRK3-201ENST00000316763 KIAA1456Q9P272 454 aa11.87□□□□□ -0.51
VRK3-201ENST00000316763 FAM90A27PA6NNH2 459 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 SNRNP70P08621 437 aaKnown RBP11.86□□□□□ -0.51
VRK3-201ENST00000316763 RAB13P51153 203 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 HBG1P69891 147 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 HBG2P69892 147 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 RHEBQ15382 184 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 ZNF585BQ52M93 769 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 AWAT1Q58HT5 328 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 SOHLH1Q5JUK2 328 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 MBNL2Q5VZF2 373 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms