RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 FREM1Q5H8C1 2179 aa11.72□□□□□ -0.53
MKS1-201ENST00000313863 A0A1B0GV90 55 aa11.72□□□□□ -0.53
MKS1-201ENST00000313863 NGFP01138 241 aa11.72□□□□□ -0.53
MKS1-201ENST00000313863 JMJD7P0C870 316 aa11.72□□□□□ -0.53
MKS1-201ENST00000313863 COX5AP20674 150 aa11.72□□□□□ -0.53
MKS1-201ENST00000313863 RPL23P62829 140 aaKnown RBP11.72□□□□□ -0.53
MKS1-201ENST00000313863 COL10A1Q03692 680 aa11.72□□□□□ -0.53
MKS1-201ENST00000313863 KCNIP4Q6PIL6 250 aa11.72□□□□□ -0.53
MKS1-201ENST00000313863 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.72□□□□□ -0.53
MKS1-201ENST00000313863 TUSC5Q8IXB3 177 aa11.72□□□□□ -0.53
MKS1-201ENST00000313863 FGFRL1Q8N441 504 aa11.72□□□□□ -0.53
MKS1-201ENST00000313863 NANOS1Q8WY41 292 aaKnown RBP11.72□□□□□ -0.53
MKS1-201ENST00000313863 CIB3Q96Q77 187 aaPredicted RBP11.72□□□□□ -0.53
MKS1-201ENST00000313863 HSPB7Q9UBY9 170 aa11.72□□□□□ -0.53
MKS1-201ENST00000313863 KMT2EQ8IZD2 1858 aa11.72□□□□□ -0.53
MKS1-201ENST00000313863 XKRY2A2RUG3 117 aa11.71□□□□□ -0.53
MKS1-201ENST00000313863 J3QW42 95 aa11.71□□□□□ -0.53
MKS1-201ENST00000313863 CFIP05156 583 aa11.71□□□□□ -0.53
MKS1-201ENST00000313863 RNF224P0DH78 156 aa11.71□□□□□ -0.53
MKS1-201ENST00000313863 LHX2P50458 406 aa11.71□□□□□ -0.53
MKS1-201ENST00000313863 SPCS3P61009 180 aa11.71□□□□□ -0.53
MKS1-201ENST00000313863 SRYQ05066 204 aa11.71□□□□□ -0.53
MKS1-201ENST00000313863 OR8G2PQ6IF36 304 aa11.71□□□□□ -0.53
MKS1-201ENST00000313863 RPP25LQ8N5L8 163 aaKnown RBP11.71□□□□□ -0.53
MKS1-201ENST00000313863 TCTEX1D1Q8N7M0 179 aa11.71□□□□□ -0.53
MKS1-201ENST00000313863 ZNF709Q8N972 641 aa11.71□□□□□ -0.53
MKS1-201ENST00000313863 TMEM170AQ8WVE7 144 aa11.71□□□□□ -0.53
MKS1-201ENST00000313863 RAB24Q969Q5 203 aa11.71□□□□□ -0.53
MKS1-201ENST00000313863 RPUSD4Q96CM3 377 aaKnown RBP11.71□□□□□ -0.53
MKS1-201ENST00000313863 FSCN3Q9NQT6 498 aa11.71□□□□□ -0.53
MKS1-201ENST00000313863 KCNIP1Q9NZI2 227 aa11.71□□□□□ -0.53
MKS1-201ENST00000313863 WIPI2Q9Y4P8 454 aa11.71□□□□□ -0.53
MKS1-201ENST00000313863 PINLYPA6NC86 204 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 C17orf112F2Z3M2 114 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 SOX15O60248 233 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 WDR1O75083 606 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 AMBPP02760 352 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 TUBG1P23258 451 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 PDLIM4P50479 330 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 CATR1Q13166 79 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 KIAA2026Q5HYC2 2103 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 DCAF12Q5T6F0 453 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 MCEMP1Q8IX19 187 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 C17orf78Q8N4C9 275 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 CISD2Q8N5K1 135 aaKnown RBP11.71□□□□□ -0.54
MKS1-201ENST00000313863 DRAM1Q8N682 238 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 OR10G9Q8NGN4 311 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 OR10G7Q8NGN6 311 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 NEIL1Q96FI4 390 aaPredicted RBP11.71□□□□□ -0.54
MKS1-201ENST00000313863 PARLQ9H300 379 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 PRO1933Q9H354 126 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.71□□□□□ -0.54
MKS1-201ENST00000313863 MBNL3Q9NUK0 354 aaKnown RBP11.71□□□□□ -0.54
MKS1-201ENST00000313863 TP53TG5Q9Y2B4 290 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 SIT1Q9Y3P8 196 aa11.71□□□□□ -0.54
MKS1-201ENST00000313863 SH2D1BO14796 132 aa11.7□□□□□ -0.54
MKS1-201ENST00000313863 TYMSP04818 313 aa11.7□□□□□ -0.54
MKS1-201ENST00000313863 RAC2P15153 192 aa11.7□□□□□ -0.54
MKS1-201ENST00000313863 CCKARP32238 428 aa11.7□□□□□ -0.54
MKS1-201ENST00000313863 IDH3GP51553 393 aaPredicted RBP11.7□□□□□ -0.54
MKS1-201ENST00000313863 CLDN18P56856 261 aa11.7□□□□□ -0.54
MKS1-201ENST00000313863 ZNF66Q6ZN08 573 aa11.7□□□□□ -0.54
MKS1-201ENST00000313863 BEND4Q6ZU67 534 aa11.7□□□□□ -0.54
MKS1-201ENST00000313863 ZNF645Q8N7E2 425 aa11.7□□□□□ -0.54
MKS1-201ENST00000313863 OR2M7Q8NG81 312 aa11.7□□□□□ -0.54
MKS1-201ENST00000313863 OR10P1Q8NGE3 313 aa11.7□□□□□ -0.54
MKS1-201ENST00000313863 OR2T10Q8NGZ9 312 aa11.7□□□□□ -0.54
MKS1-201ENST00000313863 OR4F5Q8NH21 305 aa11.7□□□□□ -0.54
MKS1-201ENST00000313863 TMEM18Q96B42 140 aa11.7□□□□□ -0.54
MKS1-201ENST00000313863 OR4F4Q96R69 305 aa11.7□□□□□ -0.54
MKS1-201ENST00000313863 ZNF703Q9H7S9 590 aaPredicted RBP11.7□□□□□ -0.54
MKS1-201ENST00000313863 ARHGAP21Q5T5U3 1957 aa11.7□□□□□ -0.54
MKS1-201ENST00000313863 DOCK10Q96BY6 2186 aa11.7□□□□□ -0.54
MKS1-201ENST00000313863 SIRPB1O00241 398 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 GGCTO75223 188 aaKnown RBP11.69□□□□□ -0.54
MKS1-201ENST00000313863 OR2H2O95918 312 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 GZMBP10144 247 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 CA6P23280 308 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 C6orf15Q6UXA7 325 aaPredicted RBP11.69□□□□□ -0.54
MKS1-201ENST00000313863 PRR18Q8N4B5 295 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 OR1K1Q8NGR3 316 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 MEGF10Q96KG7 1140 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 MRPL37Q9BZE1 423 aaKnown RBP11.69□□□□□ -0.54
MKS1-201ENST00000313863 ABI3Q9P2A4 366 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 EYSQ5T1H1 3165 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 CER1O95813 267 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 GYPAP02724 150 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 CD99P14209 185 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 LCN2P80188 198 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 FFAR4Q5NUL3 377 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 ACSM6Q6P461 480 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 BEND2Q8NDZ0 799 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 SLC25A22Q9H936 323 aa11.69□□□□□ -0.54
MKS1-201ENST00000313863 VCANP13611 3396 aa11.68□□□□□ -0.54
MKS1-201ENST00000313863 ZNF503-AS2A6NEH8 195 aa11.68□□□□□ -0.54
MKS1-201ENST00000313863 LRRC30A6NM36 301 aa11.68□□□□□ -0.54
MKS1-201ENST00000313863 RHBDL1O75783 438 aa11.68□□□□□ -0.54
MKS1-201ENST00000313863 ZNF146Q15072 292 aa11.68□□□□□ -0.54
MKS1-201ENST00000313863 ACTL10Q5JWF8 245 aa11.68□□□□□ -0.54
MKS1-201ENST00000313863 NECAP1Q8NC96 275 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms