RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 TDHQ8IZJ6 230 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 PNKDQ8N490 385 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 RDH5Q92781 318 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.67□□□□□ -1.18
COL6A5-202ENST00000312481 M0R2Z0 102 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 ARG1P05089 322 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 EFNB1P98172 346 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 ZNF750Q32MQ0 723 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 SLC23A3Q6PIS1 610 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 MS4A5Q9H3V2 200 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 TGIF2-C20orf24A0A0A6YYL0 155 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 FGF16O43320 207 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 LINC00271P0C7V0 271 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 SGMS2Q8NHU3 365 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 RNASEH2CQ8TDP1 164 aaKnown RBP7.67□□□□□ -1.18
COL6A5-202ENST00000312481 MYEOVQ96EZ4 313 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 K7EQS6 105 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 AREGP15514 252 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 MUC1P15941 1255 aaPredicted RBP7.66□□□□□ -1.18
COL6A5-202ENST00000312481 QTRT1Q9BXR0 403 aaKnown RBP7.66□□□□□ -1.18
COL6A5-202ENST00000312481 PEF1Q9UBV8 284 aaKnown RBP7.66□□□□□ -1.18
COL6A5-202ENST00000312481 JPT1Q9UK76 154 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 THSD7BQ9C0I4 1608 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 NTF3P20783 257 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 OR3A1P47881 315 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 SAPCD1Q5SSQ6 148 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 SHISA5Q8N114 240 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 RAB1CQ92928 201 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 AGMATQ9BSE5 352 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 ZNF576Q9H609 170 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 MRPL22Q9NWU5 206 aaKnown RBP7.66□□□□□ -1.18
COL6A5-202ENST00000312481 CPAMD8Q8IZJ3 1885 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 COL4A6Q14031 1691 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 TRBV24-1A0A075B6N3 115 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 ZC3H12DA2A288 527 aaKnown RBP7.66□□□□□ -1.18
COL6A5-202ENST00000312481 ERVH48-1M5A8F1 160 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 MLF1P58340 268 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 INSM1Q01101 510 aaPredicted RBP7.66□□□□□ -1.18
COL6A5-202ENST00000312481 MMD2Q8IY49 270 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 PPBPP02775 128 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 CLDN18P56856 261 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 TAF15Q92804 592 aaKnown RBP eCLIP7.66□□□□□ -1.18
COL6A5-202ENST00000312481 SMIM14Q96QK8 99 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 C5orf66Q9H5L9 145 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 SLC7A10Q9NS82 523 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 ZNF253O75346 499 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 LYL1P12980 280 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 KIR2DL1P43626 348 aaPredicted RBP7.66□□□□□ -1.18
COL6A5-202ENST00000312481 GUCA2AQ02747 115 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 C6orf201Q7Z4U5 140 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 SLC25A38Q96DW6 304 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 RSG1Q9BU20 258 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 ANKRD10Q9NXR5 420 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 B4GALT3O60512 393 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 GOSR1O95249 250 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 RELBQ01201 579 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 PRR27Q6MZM9 219 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 DHRS13Q6UX07 377 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 CLCF1Q9UBD9 225 aa7.66□□□□□ -1.18
COL6A5-202ENST00000312481 GRPP07492 148 aa7.65□□□□□ -1.18
COL6A5-202ENST00000312481 AGAP20933 346 aa7.65□□□□□ -1.18
COL6A5-202ENST00000312481 IFITM2Q01629 132 aa7.65□□□□□ -1.18
COL6A5-202ENST00000312481 CYB561D1Q8N8Q1 229 aa7.65□□□□□ -1.18
COL6A5-202ENST00000312481 TRBV23-1A0A0A0MS06 115 aa7.65□□□□□ -1.18
COL6A5-202ENST00000312481 IGFBP3P17936 291 aaPredicted RBP7.65□□□□□ -1.18
COL6A5-202ENST00000312481 C10orf113Q5VZT2 155 aa7.65□□□□□ -1.18
COL6A5-202ENST00000312481 TGIF2LXQ8IUE1 241 aa7.65□□□□□ -1.18
COL6A5-202ENST00000312481 OR4C13Q8NGP0 309 aa7.65□□□□□ -1.18
COL6A5-202ENST00000312481 RASL11BQ9BPW5 248 aa7.65□□□□□ -1.18
COL6A5-202ENST00000312481 RPL7P18124 248 aaKnown RBP7.65□□□□□ -1.18
COL6A5-202ENST00000312481 FZD5Q13467 585 aa7.65□□□□□ -1.18
COL6A5-202ENST00000312481 LINC01590Q5TEZ4 76 aa7.65□□□□□ -1.18
COL6A5-202ENST00000312481 ZNF468Q5VIY5 522 aaPredicted RBP7.65□□□□□ -1.18
COL6A5-202ENST00000312481 KLK13Q9UKR3 277 aa7.65□□□□□ -1.18
COL6A5-202ENST00000312481 GYPAP02724 150 aa7.65□□□□□ -1.18
COL6A5-202ENST00000312481 TTRP02766 147 aa7.65□□□□□ -1.18
COL6A5-202ENST00000312481 COX6CP09669 75 aa7.65□□□□□ -1.18
COL6A5-202ENST00000312481 BARX1Q9HBU1 254 aaPredicted RBP7.65□□□□□ -1.18
COL6A5-202ENST00000312481 TRBV6-6A0A0A6YYG2 114 aa7.65□□□□□ -1.19
COL6A5-202ENST00000312481 A0A1W2PS18 150 aa7.65□□□□□ -1.19
COL6A5-202ENST00000312481 IGKV3-11P04433 115 aa7.65□□□□□ -1.19
COL6A5-202ENST00000312481 TNFRSF9Q07011 255 aa7.65□□□□□ -1.19
COL6A5-202ENST00000312481 FAAP20Q6NZ36 180 aa7.65□□□□□ -1.19
COL6A5-202ENST00000312481 SDHCQ99643 169 aaPredicted RBP7.65□□□□□ -1.19
COL6A5-202ENST00000312481 ZNF665Q9H7R5 613 aa7.65□□□□□ -1.19
COL6A5-202ENST00000312481 TBL2Q9Y4P3 447 aaKnown RBP7.65□□□□□ -1.19
COL6A5-202ENST00000312481 OR4D11Q8NGI4 311 aa7.65□□□□□ -1.19
COL6A5-202ENST00000312481 DIRC3C9JPN6 131 aa7.65□□□□□ -1.19
COL6A5-202ENST00000312481 HLA-DRB1P01911 266 aa7.65□□□□□ -1.19
COL6A5-202ENST00000312481 FAM87AP0C7U9 286 aa7.65□□□□□ -1.19
COL6A5-202ENST00000312481 OR1L3Q8NH93 324 aa7.65□□□□□ -1.19
COL6A5-202ENST00000312481 TPSD1Q9BZJ3 242 aa7.65□□□□□ -1.19
COL6A5-202ENST00000312481 CEACAM18A8MTB9 384 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 IQCF6A8MYZ5 107 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 VSIG10L2P0DP72 767 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 MEF2CQ06413 473 aaPredicted RBP7.64□□□□□ -1.19
COL6A5-202ENST00000312481 ZNF774Q6NX45 483 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 FLYWCH2Q96CP2 140 aaKnown RBP7.64□□□□□ -1.19
COL6A5-202ENST00000312481 SMOC1Q9H4F8 434 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 KIAA1324LA8MWY0 1029 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms