RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 ZNF585BQ52M93 769 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 THOC7Q6I9Y2 204 aaKnown RBP13.83□□□□□ -0.2
CLCF1-201ENST00000312438 C11orf71Q6IPW1 123 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 LYPD2Q6UXB3 125 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 TCF23Q7RTU1 214 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 TCTEX1D1Q8N7M0 179 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 RRNAD1Q96FB5 475 aaKnown RBP13.83□□□□□ -0.2
CLCF1-201ENST00000312438 ABHD14BQ96IU4 210 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 AQP10Q96PS8 301 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 HSD17B10Q99714 261 aaKnown RBP13.83□□□□□ -0.2
CLCF1-201ENST00000312438 IDI2-AS1Q9NZ38 188 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 UBQLN2Q9UHD9 624 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 ROS1P08922 2347 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 CACNA1DQ01668 2161 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 K7EPK0 472 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 CLDN1O95832 211 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 SLC25A6P12236 298 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 RAB7AP51149 207 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 FAM219AQ8IW50 185 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 FGFRL1Q8N441 504 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 FAM71E2Q8N5Q1 922 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 LSM10Q969L4 123 aaKnown RBP13.83□□□□□ -0.2
CLCF1-201ENST00000312438 C5orf30Q96GV9 206 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 ARPC5LQ9BPX5 153 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 FAM212BQ9NTI7 297 aaPredicted RBP13.83□□□□□ -0.2
CLCF1-201ENST00000312438 LPAR3Q9UBY5 353 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 GAB2Q9UQC2 676 aa13.83□□□□□ -0.2
CLCF1-201ENST00000312438 ADGRG4Q8IZF6 3080 aa13.82□□□□□ -0.2
CLCF1-201ENST00000312438 ACACBO00763 2458 aa13.82□□□□□ -0.2
CLCF1-201ENST00000312438 B8ZZF3 427 aa13.82□□□□□ -0.2
CLCF1-201ENST00000312438 E5RGE8 158 aa13.82□□□□□ -0.2
CLCF1-201ENST00000312438 SOD3P08294 240 aa13.82□□□□□ -0.2
CLCF1-201ENST00000312438 DANCRP0C864 163 aa13.82□□□□□ -0.2
CLCF1-201ENST00000312438 HTR2BP41595 481 aa13.82□□□□□ -0.2
CLCF1-201ENST00000312438 GPR12P47775 334 aa13.82□□□□□ -0.2
CLCF1-201ENST00000312438 ZNF134P52741 427 aa13.82□□□□□ -0.2
CLCF1-201ENST00000312438 DTX2Q86UW9 622 aa13.82□□□□□ -0.2
CLCF1-201ENST00000312438 SLC7A5P1Q8MH63 180 aa13.82□□□□□ -0.2
CLCF1-201ENST00000312438 OR10A7Q8NGE5 316 aa13.82□□□□□ -0.2
CLCF1-201ENST00000312438 NEU4Q8WWR8 484 aaPredicted RBP13.82□□□□□ -0.2
CLCF1-201ENST00000312438 GAL3ST2Q9H3Q3 398 aa13.82□□□□□ -0.2
CLCF1-201ENST00000312438 NSG2Q9Y328 171 aa13.82□□□□□ -0.2
CLCF1-201ENST00000312438 POMT1Q9Y6A1 747 aa13.82□□□□□ -0.2
CLCF1-201ENST00000312438 ANKHD1Q8IWZ3 2542 aaKnown RBP13.81□□□□□ -0.2
CLCF1-201ENST00000312438 A0A1B0GU03 582 aa13.81□□□□□ -0.2
CLCF1-201ENST00000312438 LYNX1G3V0Z9 82 aa13.81□□□□□ -0.2
CLCF1-201ENST00000312438 C19orf84I3L1E1 186 aa13.81□□□□□ -0.2
CLCF1-201ENST00000312438 DVL1O14640 695 aa13.81□□□□□ -0.2
CLCF1-201ENST00000312438 IGKV1-39P01597 117 aa13.81□□□□□ -0.2
CLCF1-201ENST00000312438 IGKV1D-39P04432 117 aa13.81□□□□□ -0.2
CLCF1-201ENST00000312438 LYNX1P0DP58 116 aa13.81□□□□□ -0.2
CLCF1-201ENST00000312438 IGFBP2P18065 325 aa13.81□□□□□ -0.2
CLCF1-201ENST00000312438 NKX2-1P43699 371 aaPredicted RBP13.81□□□□□ -0.2
CLCF1-201ENST00000312438 RPL30P62888 115 aaKnown RBP13.81□□□□□ -0.2
CLCF1-201ENST00000312438 MRPS11P82912 194 aaKnown RBP13.81□□□□□ -0.2
CLCF1-201ENST00000312438 OR8H3Q8N146 312 aa13.81□□□□□ -0.2
CLCF1-201ENST00000312438 GPR146Q96CH1 333 aa13.81□□□□□ -0.2
CLCF1-201ENST00000312438 PLEKHA2Q9HB19 425 aa13.81□□□□□ -0.2
CLCF1-201ENST00000312438 C19orf12Q9NSK7 152 aa13.81□□□□□ -0.2
CLCF1-201ENST00000312438 CTSZQ9UBR2 303 aa13.81□□□□□ -0.2
CLCF1-201ENST00000312438 DIDO1Q9BTC0 2240 aaKnown RBP13.81□□□□□ -0.2
CLCF1-201ENST00000312438 FCN3O75636 299 aa13.8□□□□□ -0.2
CLCF1-201ENST00000312438 LPAR6P43657 344 aa13.8□□□□□ -0.2
CLCF1-201ENST00000312438 ID3Q02535 119 aa13.8□□□□□ -0.2
CLCF1-201ENST00000312438 TMEM200BQ69YZ2 307 aa13.8□□□□□ -0.2
CLCF1-201ENST00000312438 BTNL3Q6UXE8 466 aa13.8□□□□□ -0.2
CLCF1-201ENST00000312438 RNASE11Q8TAA1 199 aaKnown RBP13.8□□□□□ -0.2
CLCF1-201ENST00000312438 TCTEX1D2Q8WW35 142 aa13.8□□□□□ -0.2
CLCF1-201ENST00000312438 MSGN1A6NI15 193 aa13.8□□□□□ -0.2
CLCF1-201ENST00000312438 F5H0A9 414 aaPredicted RBP13.8□□□□□ -0.2
CLCF1-201ENST00000312438 ATG12O94817 140 aa13.8□□□□□ -0.2
CLCF1-201ENST00000312438 HKR1P10072 659 aa13.8□□□□□ -0.2
CLCF1-201ENST00000312438 NFYBP25208 207 aa13.8□□□□□ -0.2
CLCF1-201ENST00000312438 RPL12P30050 165 aaKnown RBP13.8□□□□□ -0.2
CLCF1-201ENST00000312438 UBA52P62987 128 aaKnown RBP13.8□□□□□ -0.2
CLCF1-201ENST00000312438 Q3ZCU0 254 aa13.8□□□□□ -0.2
CLCF1-201ENST00000312438 CT45A1Q5HYN5 189 aa13.8□□□□□ -0.2
CLCF1-201ENST00000312438 CT45A3Q8NHU0 189 aa13.8□□□□□ -0.2
CLCF1-201ENST00000312438 H1FXQ92522 213 aaKnown RBP13.8□□□□□ -0.2
CLCF1-201ENST00000312438 ABHD14AQ9BUJ0 271 aa13.8□□□□□ -0.2
CLCF1-201ENST00000312438 IFI27L2Q9H2X8 130 aa13.8□□□□□ -0.2
CLCF1-201ENST00000312438 RPUSD1Q9UJJ7 312 aaKnown RBP13.8□□□□□ -0.2
CLCF1-201ENST00000312438 PROP1O75360 226 aa13.79□□□□□ -0.2
CLCF1-201ENST00000312438 IGHV3-7P01780 117 aa13.79□□□□□ -0.2
CLCF1-201ENST00000312438 IGHV2-70P01814 119 aa13.79□□□□□ -0.2
CLCF1-201ENST00000312438 AKR1C2P52895 323 aa13.79□□□□□ -0.2
CLCF1-201ENST00000312438 ZNF273Q14593 569 aa13.79□□□□□ -0.2
CLCF1-201ENST00000312438 KIAA2026Q5HYC2 2103 aa13.79□□□□□ -0.2
CLCF1-201ENST00000312438 SPAG16Q8N0X2 631 aa13.79□□□□□ -0.2
CLCF1-201ENST00000312438 CD300LFQ8TDQ1 290 aa13.79□□□□□ -0.2
CLCF1-201ENST00000312438 ZNF714Q96N38 554 aa13.79□□□□□ -0.2
CLCF1-201ENST00000312438 ZNF471Q9BX82 626 aaPredicted RBP13.79□□□□□ -0.2
CLCF1-201ENST00000312438 GSX2Q9BZM3 304 aa13.79□□□□□ -0.2
CLCF1-201ENST00000312438 ZC4H2Q9NQZ6 224 aa13.79□□□□□ -0.2
CLCF1-201ENST00000312438 RELNP78509 3460 aa13.79□□□□□ -0.2
CLCF1-201ENST00000312438 NBEAQ8NFP9 2946 aa13.79□□□□□ -0.2
CLCF1-201ENST00000312438 DSCAMO60469 2012 aa13.79□□□□□ -0.2
CLCF1-201ENST00000312438 HCFC1P51610 2035 aa13.79□□□□□ -0.2
CLCF1-201ENST00000312438 A0A0G2JRQ6 117 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 TAAR5O14804 337 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms