RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 TRAT1Q6PIZ9 186 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 OR4C13Q8NGP0 309 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 HSPB9Q9BQS6 159 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 DCSTAMPQ9H295 470 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 PLXNB1O43157 2135 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 NCBP2LA6PVI3 153 aaKnown RBP9.55□□□□□ -0.88
SCFD1-201ENST00000311943 SERPINE3A8MV23 424 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 OR2F2O95006 317 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 ELK1P19419 428 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 RAB7AP51149 207 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 TCTEX1D4Q5JR98 221 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 C11orf88Q6PI97 169 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 LCNL1Q6ZST4 164 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 ZNF833PQ6ZTB9 187 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 GPR141Q7Z602 305 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 ZNF329Q86UD4 541 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 Q8N6K4 173 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 C5orf56Q8N8D9 126 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 C8orf31Q8N9H6 132 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 OR2T6Q8NHC8 308 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 FBN3Q75N90 2809 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 IGKV1D-13A0A0B4J2D9 117 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 TSPAN15O95858 294 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 FAM106CPP0CH98 169 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 IGKV1-13P0DP09 117 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 TALDO1P37837 337 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 MRPS15P82914 257 aaKnown RBP9.55□□□□□ -0.88
SCFD1-201ENST00000311943 FAM131AQ6UXB0 335 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 ZNF554Q86TJ5 538 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 OR8H3Q8N146 312 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 Q8N2B8 174 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 Q8N9W7 124 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 SNAPC3Q92966 411 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 RIMS4Q9H426 269 aaPredicted RBP9.55□□□□□ -0.88
SCFD1-201ENST00000311943 AUNIPQ9H7T9 357 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 PITPNC1Q9UKF7 332 aa9.55□□□□□ -0.88
SCFD1-201ENST00000311943 MRPS7Q9Y2R9 242 aaKnown RBP9.55□□□□□ -0.88
SCFD1-201ENST00000311943 TRBV6-7A0A0A0MS04 114 aa9.54□□□□□ -0.88
SCFD1-201ENST00000311943 POM121CA8CG34 1229 aa9.54□□□□□ -0.88
SCFD1-201ENST00000311943 HLA-DQB1P01920 261 aa9.54□□□□□ -0.88
SCFD1-201ENST00000311943 IGKV1-16P04430 117 aa9.54□□□□□ -0.88
SCFD1-201ENST00000311943 GNG2P59768 71 aa9.54□□□□□ -0.88
SCFD1-201ENST00000311943 RPL15P61313 204 aaKnown RBP9.54□□□□□ -0.88
SCFD1-201ENST00000311943 CCDC144NLQ6NUI1 221 aa9.54□□□□□ -0.88
SCFD1-201ENST00000311943 SHISA2Q6UWI4 295 aa9.54□□□□□ -0.88
SCFD1-201ENST00000311943 ZNF383Q8NA42 475 aa9.54□□□□□ -0.88
SCFD1-201ENST00000311943 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.54□□□□□ -0.884e-7■■■■■ 32.6
SCFD1-201ENST00000311943 A0A1W2PRX2 142 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 OOSP1A8MZH6 123 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 H3BUI4 141 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 CTDSP2O14595 271 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 TAS2R20P59543 309 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 EBI3Q14213 229 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 Q3ZCU0 254 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 ARSJQ5FYB0 599 aaPredicted RBP9.53□□□□□ -0.88
SCFD1-201ENST00000311943 C18orf65Q6ZTR6 163 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 MOB1BQ7L9L4 216 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 OR4A4PQ8NGN8 299 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 WIPF2Q8TF74 440 aaPredicted RBP9.53□□□□□ -0.88
SCFD1-201ENST00000311943 CITED2Q99967 270 aaPredicted RBP9.53□□□□□ -0.88
SCFD1-201ENST00000311943 CABLES2Q9BTV7 478 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 PRSS22Q9GZN4 317 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 WNT10AQ9GZT5 417 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 OR2D2Q9H210 308 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 ABCG5Q9H222 651 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 MIXL1Q9H2W2 232 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 SDHAF2Q9NX18 166 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 ETV7Q9Y603 341 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 LANCL1O43813 399 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 IGLV2-14P01704 120 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 STEAP3Q658P3 488 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 SNX29P2Q8IUI4 249 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 OR10J5Q8NHC4 309 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 TPSG1Q9NRR2 321 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 MOB4Q9Y3A3 225 aa9.53□□□□□ -0.88
SCFD1-201ENST00000311943 MGAM2Q2M2H8 2515 aa9.52□□□□□ -0.89
SCFD1-201ENST00000311943 M0R1X1 148 aa9.52□□□□□ -0.89
SCFD1-201ENST00000311943 FCN1O00602 326 aa9.52□□□□□ -0.89
SCFD1-201ENST00000311943 GSTP1P09211 210 aaKnown RBP9.52□□□□□ -0.89
SCFD1-201ENST00000311943 ACTBP60709 375 aa9.52□□□□□ -0.89
SCFD1-201ENST00000311943 UBE2NLQ5JXB2 153 aa9.52□□□□□ -0.89
SCFD1-201ENST00000311943 THNSL2Q86YJ6 484 aa9.52□□□□□ -0.89
SCFD1-201ENST00000311943 H1FOOQ8IZA3 346 aaPredicted RBP9.52□□□□□ -0.89
SCFD1-201ENST00000311943 LINC00473A8K010 186 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 ADARB2-AS1A8MUL3 147 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 H0YJW9 148 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 RAB29O14966 203 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 XRCC3O43542 346 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 MOSP00540 346 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 IL3RAP26951 378 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 CD1BP29016 333 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 VDAC2P45880 294 aaPredicted RBP9.51□□□□□ -0.89
SCFD1-201ENST00000311943 RFX2P48378 723 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 RORCP51449 518 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 MMDQ15546 238 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 OR2B11Q5JQS5 317 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 TMEM69Q5SWH9 247 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 LIAT1Q6ZQX7 453 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 BEST4Q8NFU0 473 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 OR2T10Q8NGZ9 312 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms