RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 TXN2Q99757 166 aa15.38■□□□□ 0.05
SPSB4-201ENST00000310546 WDR61Q9GZS3 305 aaKnown RBP15.38■□□□□ 0.05
SPSB4-201ENST00000310546 ZNF407Q9C0G0 2248 aa15.38■□□□□ 0.05
SPSB4-201ENST00000310546 IGKV3D-11A0A0A0MRZ8 115 aa15.38■□□□□ 0.05
SPSB4-201ENST00000310546 LILRA5A6NI73 299 aa15.38■□□□□ 0.05
SPSB4-201ENST00000310546 NKX6-3A6NJ46 265 aa15.38■□□□□ 0.05
SPSB4-201ENST00000310546 DEFA4P12838 97 aa15.38■□□□□ 0.05
SPSB4-201ENST00000310546 PMP22Q01453 160 aa15.38■□□□□ 0.05
SPSB4-201ENST00000310546 CACNG5Q9UF02 275 aa15.38■□□□□ 0.05
SPSB4-201ENST00000310546 TP53TG3Q9ULZ0 132 aa15.38■□□□□ 0.05
SPSB4-201ENST00000310546 WIPI2Q9Y4P8 454 aa15.38■□□□□ 0.05
SPSB4-201ENST00000310546 MAP1BP46821 2468 aaKnown RBP15.38■□□□□ 0.05
SPSB4-201ENST00000310546 CDKN1BP46527 198 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 PAFAH1B2P68402 229 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 ZXDAP98168 799 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 SHBQ15464 509 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 RABEPKQ7Z6M1 372 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 BTF3L4Q96K17 158 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 SPOCK3Q9BQ16 436 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 IGHV1OR21-1A0A087WYE8 117 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 SYNGR2O43760 224 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 MSR1P21757 451 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 KLF3P57682 345 aaPredicted RBP15.37■□□□□ 0.05
SPSB4-201ENST00000310546 MSMO1Q15800 293 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 TMEM211Q6ICI0 200 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 C17orf82Q86X59 251 aaPredicted RBP15.37■□□□□ 0.05
SPSB4-201ENST00000310546 BAGE3Q86Y29 109 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 BAGE2Q86Y30 109 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 LYG1Q8N1E2 194 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 TAF15Q92804 592 aaKnown RBP eCLIP15.37■□□□□ 0.05
SPSB4-201ENST00000310546 PLSCR2Q9NRY7 297 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 C1QTNF9P0C862 333 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 CBLN1P23435 193 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 CTSSP25774 331 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 FFAR4Q5NUL3 377 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 Q6ZN92 141 aa15.37■□□□□ 0.05
SPSB4-201ENST00000310546 REPIN1Q9BWE0 567 aaKnown RBP15.37■□□□□ 0.05
SPSB4-201ENST00000310546 ZNF552Q9H707 407 aaPredicted RBP15.37■□□□□ 0.05
SPSB4-201ENST00000310546 YLPM1P49750 1951 aaKnown RBP15.36■□□□□ 0.05
SPSB4-201ENST00000310546 CRYAAP02489 173 aa15.36■□□□□ 0.05
SPSB4-201ENST00000310546 CRISP2P16562 243 aa15.36■□□□□ 0.05
SPSB4-201ENST00000310546 MPLP40238 635 aa15.36■□□□□ 0.05
SPSB4-201ENST00000310546 LINC00310P59036 64 aa15.36■□□□□ 0.05
SPSB4-201ENST00000310546 OR5D13Q8NGL4 314 aa15.36■□□□□ 0.05
SPSB4-201ENST00000310546 NEIL1Q96FI4 390 aaPredicted RBP15.36■□□□□ 0.05
SPSB4-201ENST00000310546 ALKBH7Q9BT30 221 aaPredicted RBP15.36■□□□□ 0.05
SPSB4-201ENST00000310546 KLRF1Q9NZS2 232 aa15.36■□□□□ 0.05
SPSB4-201ENST00000310546 LAMTOR5O43504 91 aa15.36■□□□□ 0.05
SPSB4-201ENST00000310546 PSG2P11465 335 aa15.36■□□□□ 0.05
SPSB4-201ENST00000310546 HLA-BQ31612 363 aa15.36■□□□□ 0.05
SPSB4-201ENST00000310546 SPATA45Q537H7 98 aa15.36■□□□□ 0.05
SPSB4-201ENST00000310546 ZNF468Q5VIY5 522 aaPredicted RBP15.36■□□□□ 0.05
SPSB4-201ENST00000310546 LINC01551Q86U37 167 aa15.36■□□□□ 0.05
SPSB4-201ENST00000310546 ZDHHC23Q8IYP9 409 aa15.36■□□□□ 0.05
SPSB4-201ENST00000310546 AGBL5Q8NDL9 886 aa15.36■□□□□ 0.05
SPSB4-201ENST00000310546 PGLYRP1O75594 196 aaPredicted RBP15.35■□□□□ 0.05
SPSB4-201ENST00000310546 VENTXO95231 258 aa15.35■□□□□ 0.05
SPSB4-201ENST00000310546 NPPCP23582 126 aa15.35■□□□□ 0.05
SPSB4-201ENST00000310546 SUMO1P63165 101 aaKnown RBP15.35■□□□□ 0.05
SPSB4-201ENST00000310546 CNN3Q15417 329 aaKnown RBP15.35■□□□□ 0.05
SPSB4-201ENST00000310546 ACSM6Q6P461 480 aa15.35■□□□□ 0.05
SPSB4-201ENST00000310546 TMEM144Q7Z5S9 345 aa15.35■□□□□ 0.05
SPSB4-201ENST00000310546 DERL1Q9BUN8 251 aa15.35■□□□□ 0.05
SPSB4-201ENST00000310546 LAMTOR2Q9Y2Q5 125 aa15.35■□□□□ 0.05
SPSB4-201ENST00000310546 CBY3A6NI87 242 aa15.35■□□□□ 0.05
SPSB4-201ENST00000310546 KIAA1324LA8MWY0 1029 aaPredicted RBP15.35■□□□□ 0.05
SPSB4-201ENST00000310546 C11orf94C9JXX5 98 aa15.35■□□□□ 0.05
SPSB4-201ENST00000310546 F2Z2F3 143 aa15.35■□□□□ 0.05
SPSB4-201ENST00000310546 OR8B8Q15620 311 aa15.35■□□□□ 0.05
SPSB4-201ENST00000310546 KCNMB1Q16558 191 aa15.35■□□□□ 0.05
SPSB4-201ENST00000310546 ACSF3Q4G176 576 aaPredicted RBP15.35■□□□□ 0.05
SPSB4-201ENST00000310546 CCDC74BQ96LY2 380 aa15.35■□□□□ 0.05
SPSB4-201ENST00000310546 ELOVL5Q9NYP7 299 aa15.35■□□□□ 0.05
SPSB4-201ENST00000310546 ZNF816-ZNF321PA0A0X1KG74 233 aa15.34■□□□□ 0.05
SPSB4-201ENST00000310546 H0Y980 276 aa15.34■□□□□ 0.05
SPSB4-201ENST00000310546 NRASP01111 189 aa15.34■□□□□ 0.05
SPSB4-201ENST00000310546 WNT2P09544 360 aa15.34■□□□□ 0.05
SPSB4-201ENST00000310546 F2RP25116 425 aa15.34■□□□□ 0.05
SPSB4-201ENST00000310546 COMPP49747 757 aaPredicted RBP15.34■□□□□ 0.05
SPSB4-201ENST00000310546 UNQ5815/PRO19632Q6UWF5 114 aa15.34■□□□□ 0.05
SPSB4-201ENST00000310546 OR10G9Q8NGN4 311 aa15.34■□□□□ 0.05
SPSB4-201ENST00000310546 OR10G7Q8NGN6 311 aa15.34■□□□□ 0.05
SPSB4-201ENST00000310546 OR1L3Q8NH93 324 aa15.34■□□□□ 0.05
SPSB4-201ENST00000310546 RNF114Q9Y508 228 aa15.34■□□□□ 0.05
SPSB4-201ENST00000310546 HNRNPA3P51991 378 aaKnown RBP15.34■□□□□ 0.05
SPSB4-201ENST00000310546 ORAOV1Q8WV07 137 aa15.34■□□□□ 0.05
SPSB4-201ENST00000310546 C10orf35Q96D05 121 aa15.34■□□□□ 0.05
SPSB4-201ENST00000310546 BOD1L1Q8NFC6 3051 aa15.34■□□□□ 0.05
SPSB4-201ENST00000310546 DIRC3C9JPN6 131 aa15.33■□□□□ 0.05
SPSB4-201ENST00000310546 TLX3O43711 291 aaPredicted RBP15.33■□□□□ 0.05
SPSB4-201ENST00000310546 RBM11P57052 281 aaKnown RBP15.33■□□□□ 0.05
SPSB4-201ENST00000310546 UBE2G2P60604 165 aa15.33■□□□□ 0.05
SPSB4-201ENST00000310546 ATP6V1FQ16864 119 aa15.33■□□□□ 0.05
SPSB4-201ENST00000310546 OR4B1Q8NGF8 309 aa15.33■□□□□ 0.05
SPSB4-201ENST00000310546 SPTSSAQ969W0 71 aa15.33■□□□□ 0.05
SPSB4-201ENST00000310546 ESPL1Q14674 2120 aa15.33■□□□□ 0.05
SPSB4-201ENST00000310546 CD300LBA8K4G0 201 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 S100A7P31151 101 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 HINT1P49773 126 aaPredicted RBP15.33■□□□□ 0.04
SPSB4-201ENST00000310546 UBE2V1Q13404 147 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms