RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ZNF773Q6PK81 442 aa20.85■□□□□ 0.93
CDKN2A-201ENST00000304494 WFDC9Q8NEX5 89 aa20.85■□□□□ 0.93
CDKN2A-201ENST00000304494 ZFP57Q9NU63 452 aa20.85■□□□□ 0.93
CDKN2A-201ENST00000304494 STUB1Q9UNE7 303 aa20.85■□□□□ 0.93
CDKN2A-201ENST00000304494 CD3GP09693 182 aa20.84■□□□□ 0.93
CDKN2A-201ENST00000304494 CEACAM6P40199 344 aa20.84■□□□□ 0.93
CDKN2A-201ENST00000304494 OR10R2Q8NGX6 335 aa20.84■□□□□ 0.93
CDKN2A-201ENST00000304494 PTX4Q96A99 478 aa20.84■□□□□ 0.93
CDKN2A-201ENST00000304494 ZNF251Q9BRH9 671 aa20.84■□□□□ 0.93
CDKN2A-201ENST00000304494 TXNL4BQ9NX01 149 aaKnown RBP20.84■□□□□ 0.93
CDKN2A-201ENST00000304494 PLXNB1O43157 2135 aa20.84■□□□□ 0.93
CDKN2A-201ENST00000304494 METTL21EPA6NDL7 271 aa20.83■□□□□ 0.93
CDKN2A-201ENST00000304494 TRDCB7Z8K6 153 aa20.83■□□□□ 0.93
CDKN2A-201ENST00000304494 SCTP09683 121 aa20.83■□□□□ 0.93
CDKN2A-201ENST00000304494 SLC6A1P30531 599 aa20.83■□□□□ 0.93
CDKN2A-201ENST00000304494 ACTBP60709 375 aa20.83■□□□□ 0.93
CDKN2A-201ENST00000304494 RPL23AP62750 156 aaKnown RBP20.83■□□□□ 0.93
CDKN2A-201ENST00000304494 OXLD1Q5BKU9 147 aa20.83■□□□□ 0.93
CDKN2A-201ENST00000304494 TEX38Q6PEX7 206 aa20.83■□□□□ 0.93
CDKN2A-201ENST00000304494 PHF21AQ96BD5 680 aa20.83■□□□□ 0.93
CDKN2A-201ENST00000304494 OR1A1Q9P1Q5 309 aa20.83■□□□□ 0.93
CDKN2A-201ENST00000304494 SSR3Q9UNL2 185 aa20.83■□□□□ 0.93
CDKN2A-201ENST00000304494 PNLIPRP3Q17RR3 467 aa20.82■□□□□ 0.92
CDKN2A-201ENST00000304494 MOGAT2Q3SYC2 334 aa20.82■□□□□ 0.92
CDKN2A-201ENST00000304494 RBMXL1Q96E39 390 aaKnown RBP20.82■□□□□ 0.92
CDKN2A-201ENST00000304494 ZNF107Q9UII5 783 aaPredicted RBP20.82■□□□□ 0.92
CDKN2A-201ENST00000304494 TPRA1Q86W33 373 aa20.81■□□□□ 0.92
CDKN2A-201ENST00000304494 OR4A4PQ8NGN8 299 aa20.81■□□□□ 0.92
CDKN2A-201ENST00000304494 HSPB9Q9BQS6 159 aa20.81■□□□□ 0.92
CDKN2A-201ENST00000304494 AGMATQ9BSE5 352 aa20.81■□□□□ 0.92
CDKN2A-201ENST00000304494 PARP12Q9H0J9 701 aaKnown RBP20.81■□□□□ 0.92
CDKN2A-201ENST00000304494 C11orf54Q9H0W9 315 aaPredicted RBP20.81■□□□□ 0.92
CDKN2A-201ENST00000304494 KCNK7Q9Y2U2 307 aa20.81■□□□□ 0.92
CDKN2A-201ENST00000304494 OR5H14A6NHG9 310 aa20.8■□□□□ 0.92
CDKN2A-201ENST00000304494 NOTOA8MTQ0 251 aa20.8■□□□□ 0.92
CDKN2A-201ENST00000304494 NBR2O15453 112 aa20.8■□□□□ 0.92
CDKN2A-201ENST00000304494 IGF1P05019 195 aa20.8■□□□□ 0.92
CDKN2A-201ENST00000304494 SLC2A2P11168 524 aaPredicted RBP20.8■□□□□ 0.92
CDKN2A-201ENST00000304494 VDAC1P21796 283 aa20.8■□□□□ 0.92
CDKN2A-201ENST00000304494 MC5RP33032 325 aa20.8■□□□□ 0.92
CDKN2A-201ENST00000304494 SERPINB10P48595 397 aa20.8■□□□□ 0.92
CDKN2A-201ENST00000304494 KIR2DS1Q14954 304 aa20.8■□□□□ 0.92
CDKN2A-201ENST00000304494 RPL39P5Q59GN2 51 aa20.8■□□□□ 0.92
CDKN2A-201ENST00000304494 NR2C2APQ86WQ0 139 aa20.8■□□□□ 0.92
CDKN2A-201ENST00000304494 ABHD14BQ96IU4 210 aa20.8■□□□□ 0.92
CDKN2A-201ENST00000304494 KIAA1456Q9P272 454 aa20.8■□□□□ 0.92
CDKN2A-201ENST00000304494 ZNF580Q9UK33 172 aa20.8■□□□□ 0.92
CDKN2A-201ENST00000304494 NUDT19A8MXV4 375 aa20.79■□□□□ 0.92
CDKN2A-201ENST00000304494 RAB27BO00194 218 aa20.79■□□□□ 0.92
CDKN2A-201ENST00000304494 MFNGO00587 321 aa20.79■□□□□ 0.92
CDKN2A-201ENST00000304494 FCGR3AP08637 254 aa20.79■□□□□ 0.92
CDKN2A-201ENST00000304494 OR5H8P0DN80 308 aa20.79■□□□□ 0.92
CDKN2A-201ENST00000304494 HIST1H1DP16402 221 aaKnown RBP20.79■□□□□ 0.92
CDKN2A-201ENST00000304494 GNB3P16520 340 aa20.79■□□□□ 0.92
CDKN2A-201ENST00000304494 ARL6IP1Q15041 203 aa20.79■□□□□ 0.92
CDKN2A-201ENST00000304494 FAM131AQ6UXB0 335 aa20.79■□□□□ 0.92
CDKN2A-201ENST00000304494 REC114Q7Z4M0 266 aa20.79■□□□□ 0.92
CDKN2A-201ENST00000304494 NPBQ8NG41 125 aa20.79■□□□□ 0.92
CDKN2A-201ENST00000304494 RRP15Q9Y3B9 282 aaKnown RBP20.79■□□□□ 0.92
CDKN2A-201ENST00000304494 A0A0B4J203 849 aa20.78■□□□□ 0.92
CDKN2A-201ENST00000304494 IGKV1-6A0A0C4DH72 117 aa20.78■□□□□ 0.92
CDKN2A-201ENST00000304494 FABP7O15540 132 aa20.78■□□□□ 0.92
CDKN2A-201ENST00000304494 CT45A6P0DMU7 189 aa20.78■□□□□ 0.92
CDKN2A-201ENST00000304494 CT45A5P0DMU8 189 aa20.78■□□□□ 0.92
CDKN2A-201ENST00000304494 CT45A7P0DMV0 189 aa20.78■□□□□ 0.92
CDKN2A-201ENST00000304494 FOXE3Q13461 319 aa20.78■□□□□ 0.92
CDKN2A-201ENST00000304494 KCTD21Q4G0X4 260 aa20.78■□□□□ 0.92
CDKN2A-201ENST00000304494 CXorf66Q5JRM2 361 aaPredicted RBP20.78■□□□□ 0.92
CDKN2A-201ENST00000304494 RCC1LQ96I51 464 aaKnown RBP20.78■□□□□ 0.92
CDKN2A-201ENST00000304494 RITA1Q96K30 269 aa20.78■□□□□ 0.92
CDKN2A-201ENST00000304494 CHCHD6Q9BRQ6 235 aa20.78■□□□□ 0.92
CDKN2A-201ENST00000304494 ATG5Q9H1Y0 275 aa20.78■□□□□ 0.92
CDKN2A-201ENST00000304494 ZNF221Q9UK13 617 aa20.78■□□□□ 0.92
CDKN2A-201ENST00000304494 PRKDCP78527 4128 aaKnown RBP20.78■□□□□ 0.92
CDKN2A-201ENST00000304494 A0A075B6Q4 140 aa20.77■□□□□ 0.92
CDKN2A-201ENST00000304494 SMIM30A4D0T7 59 aa20.77■□□□□ 0.92
CDKN2A-201ENST00000304494 DUS4LO95620 317 aaKnown RBP20.77■□□□□ 0.92
CDKN2A-201ENST00000304494 HLA-DRB1P01911 266 aa20.77■□□□□ 0.92
CDKN2A-201ENST00000304494 ELANEP08246 267 aa20.77■□□□□ 0.92
CDKN2A-201ENST00000304494 IGLL1P15814 213 aa20.77■□□□□ 0.92
CDKN2A-201ENST00000304494 CNTFRP26992 372 aa20.77■□□□□ 0.92
CDKN2A-201ENST00000304494 KLHL30-AS1Q8NEE0 82 aa20.77■□□□□ 0.92
CDKN2A-201ENST00000304494 CENPOQ9BU64 300 aa20.77■□□□□ 0.92
CDKN2A-201ENST00000304494 RDH8Q9NYR8 311 aa20.77■□□□□ 0.92
CDKN2A-201ENST00000304494 WASHC3Q9Y3C0 194 aa20.77■□□□□ 0.92
CDKN2A-201ENST00000304494 H0YJW9 148 aa20.76■□□□□ 0.91
CDKN2A-201ENST00000304494 RBBP9O75884 186 aa20.76■□□□□ 0.91
CDKN2A-201ENST00000304494 NDUFA3O95167 84 aa20.76■□□□□ 0.91
CDKN2A-201ENST00000304494 DIRAS3O95661 229 aa20.76■□□□□ 0.91
CDKN2A-201ENST00000304494 TALDO1P37837 337 aa20.76■□□□□ 0.91
CDKN2A-201ENST00000304494 CFHR3Q02985 330 aa20.76■□□□□ 0.91
CDKN2A-201ENST00000304494 ARFRP1Q13795 201 aa20.76■□□□□ 0.91
CDKN2A-201ENST00000304494 C5orf64Q2M2E5 130 aa20.76■□□□□ 0.91
CDKN2A-201ENST00000304494 LIN54Q6MZP7 749 aa20.76■□□□□ 0.91
CDKN2A-201ENST00000304494 ZNF695Q8IW36 515 aa20.76■□□□□ 0.91
CDKN2A-201ENST00000304494 OR5AN1Q8NGI8 311 aa20.76■□□□□ 0.91
CDKN2A-201ENST00000304494 KCTD7Q96MP8 289 aa20.76■□□□□ 0.91
CDKN2A-201ENST00000304494 TOLLIPQ9H0E2 274 aa20.76■□□□□ 0.91
CDKN2A-201ENST00000304494 NECAP2Q9NVZ3 263 aa20.76■□□□□ 0.91
CDKN2A-201ENST00000304494 H7C2Y5 167 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms