RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 PSMD7P51665 324 aa13.03□□□□□ -0.32
TRAPPC1-201ENST00000303731 MLLT11Q13015 90 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC1-201ENST00000303731 FHL3Q13643 280 aa13.03□□□□□ -0.32
TRAPPC1-201ENST00000303731 VAX1Q5SQQ9 334 aa13.03□□□□□ -0.32
TRAPPC1-201ENST00000303731 FAM89BQ8N5H3 189 aa13.03□□□□□ -0.32
TRAPPC1-201ENST00000303731 SETD6Q8TBK2 473 aa13.03□□□□□ -0.32
TRAPPC1-201ENST00000303731 TMEM203Q969S6 136 aa13.03□□□□□ -0.32
TRAPPC1-201ENST00000303731 B9D2Q9BPU9 175 aa13.03□□□□□ -0.32
TRAPPC1-201ENST00000303731 ANKRD60Q9BZ19 345 aa13.03□□□□□ -0.32
TRAPPC1-201ENST00000303731 LPAR5Q9H1C0 372 aa13.03□□□□□ -0.32
TRAPPC1-201ENST00000303731 COL7A1Q02388 2944 aa13.02□□□□□ -0.33
TRAPPC1-201ENST00000303731 HSMCR30P0CW71 290 aa13.02□□□□□ -0.33
TRAPPC1-201ENST00000303731 PPIFP30405 207 aaKnown RBP13.02□□□□□ -0.33
TRAPPC1-201ENST00000303731 RUNX1Q01196 453 aa13.02□□□□□ -0.33
TRAPPC1-201ENST00000303731 CD69Q07108 199 aa13.02□□□□□ -0.33
TRAPPC1-201ENST00000303731 RAB11BQ15907 218 aa13.02□□□□□ -0.33
TRAPPC1-201ENST00000303731 DEFB136Q30KP8 78 aa13.02□□□□□ -0.33
TRAPPC1-201ENST00000303731 TMEM91Q6ZNR0 172 aa13.02□□□□□ -0.33
TRAPPC1-201ENST00000303731 PRSS48Q7RTY5 328 aa13.02□□□□□ -0.33
TRAPPC1-201ENST00000303731 TCTEX1D1Q8N7M0 179 aa13.02□□□□□ -0.33
TRAPPC1-201ENST00000303731 DUX3Q96PT4 197 aa13.02□□□□□ -0.33
TRAPPC1-201ENST00000303731 RNF5Q99942 180 aa13.02□□□□□ -0.33
TRAPPC1-201ENST00000303731 C12orf4Q9NQ89 552 aa13.02□□□□□ -0.33
TRAPPC1-201ENST00000303731 PARP11Q9NR21 331 aa13.02□□□□□ -0.33
TRAPPC1-201ENST00000303731 NKX1-2Q9UD57 310 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC1-201ENST00000303731 A0A0A6YYD4 124 aa13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 IGHV7-81A0A0B4J1V7 117 aa13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 TRAV41A0A0B4J266 112 aa13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 ATP6V0E1O15342 81 aa13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 ST8SIA5O15466 376 aa13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 HSPA12AO43301 675 aa13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 IGLV1-40P01703 118 aa13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 OR8U8P0C7N1 319 aa13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 HSPA13P48723 471 aa13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 HLA-DRB3P79483 266 aa13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 ZNF660Q6AZW8 331 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 OR56B1Q8NGI3 324 aa13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 CCDC90BQ9GZT6 254 aa13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 KCNK15Q9H427 330 aa13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 ACOT13Q9NPJ3 140 aa13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 AK3Q9UIJ7 227 aa13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 VSIG4Q9Y279 399 aa13.01□□□□□ -0.33
TRAPPC1-201ENST00000303731 ANKRD65E5RJM6 399 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 SOCS1O15524 211 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 CRHBPP24387 322 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 CNTFRP26992 372 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 CALRP27797 417 aaKnown RBP13□□□□□ -0.33
TRAPPC1-201ENST00000303731 INSL3P51460 131 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 CRIP2P52943 208 aaPredicted RBP13□□□□□ -0.33
TRAPPC1-201ENST00000303731 RPS25P62851 125 aaKnown RBP13□□□□□ -0.33
TRAPPC1-201ENST00000303731 P2RY14Q15391 338 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 FAM131AQ6UXB0 335 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 C5orf24Q7Z6I8 188 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 ZNF491Q8N8L2 437 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 MINDY2Q8NBR6 621 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 OR11H1Q8NG94 326 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 NRG4Q8WWG1 115 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 PTX4Q96A99 478 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 CYYR1Q96J86 154 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 RITA1Q96K30 269 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 MGLLQ99685 303 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 AGMATQ9BSE5 352 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 BLOC1S6Q9UL45 172 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 RNF150Q9ULK6 438 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 WASHC3Q9Y3C0 194 aa13□□□□□ -0.33
TRAPPC1-201ENST00000303731 FOXI3A8MTJ6 420 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 SEC14L6B5MCN3 397 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 G3V318 75 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 RRHO14718 337 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 GSTP1P09211 210 aaKnown RBP12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 CT45A6P0DMU7 189 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 CT45A5P0DMU8 189 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 CT45A7P0DMV0 189 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 CEACAM6P40199 344 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 RAB9AP51151 201 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 MRPS15P82914 257 aaKnown RBP12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 TMEM267Q0VDI3 215 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 PLGLAQ15195 96 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 PYHIN1Q6K0P9 492 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 OR5AN1Q8NGI8 311 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 FAM3DQ96BQ1 224 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 GFI1Q99684 422 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 CMSS1Q9BQ75 279 aaKnown RBP12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 Q9N2K0 584 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 AK6Q9Y3D8 172 aaKnown RBP12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 WSB1Q9Y6I7 421 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 V9GY05 133 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 DNAH9Q9NYC9 4486 aa12.99□□□□□ -0.33
TRAPPC1-201ENST00000303731 H0YJW9 148 aa12.98□□□□□ -0.33
TRAPPC1-201ENST00000303731 H7C2Y5 167 aa12.98□□□□□ -0.33
TRAPPC1-201ENST00000303731 I3L521 148 aa12.98□□□□□ -0.33
TRAPPC1-201ENST00000303731 SERPINB10P48595 397 aa12.98□□□□□ -0.33
TRAPPC1-201ENST00000303731 VEGFCP49767 419 aa12.98□□□□□ -0.33
TRAPPC1-201ENST00000303731 LUMP51884 338 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC1-201ENST00000303731 ZNF616Q08AN1 781 aa12.98□□□□□ -0.33
TRAPPC1-201ENST00000303731 TBCEQ15813 527 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC1-201ENST00000303731 RPL39P5Q59GN2 51 aa12.98□□□□□ -0.33
TRAPPC1-201ENST00000303731 OR1N2Q8NGR9 330 aa12.98□□□□□ -0.33
TRAPPC1-201ENST00000303731 ARHGAP5-AS1Q96IT6 56 aa12.98□□□□□ -0.33
TRAPPC1-201ENST00000303731 C11orf54Q9H0W9 315 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms