RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 MBPP02686 304 aaPredicted RBP12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 TEX36Q5VZQ5 186 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 ZNF788Q6ZQV5 615 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 TCTEX1D2Q8WW35 142 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 ST8SIA2Q92186 375 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 GSX2Q9BZM3 304 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 JPT1Q9UK76 154 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 NSG2Q9Y328 171 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 CACNA1BQ00975 2339 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 ADGRG4Q8IZF6 3080 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 A0A1B0GW55 424 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 TMEM178BH3BS89 294 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 SIGLEC5O15389 551 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 ST8SIA5O15466 376 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 ZG16O60844 167 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 DUX4L2P0CJ85 424 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 DUX4L3P0CJ86 424 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 DUX4L4P0CJ87 422 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 DUX4L5P0CJ88 424 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 DUX4L6P0CJ89 424 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 DUX4L7P0CJ90 424 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 NFYBP25208 207 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 RPL12P30050 165 aaKnown RBP12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 GPR12P47775 334 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 VAMP2P63027 116 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 IL15RAQ13261 267 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 OR2B11Q5JQS5 317 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 FAM53AQ6NSI3 398 aaPredicted RBP12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 DUX4L9Q6RFH8 374 aaPredicted RBP12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 SCARB1Q8WTV0 552 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 CITED4Q96RK1 184 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 DUX4Q9UBX2 424 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 SLC25A10Q9UBX3 287 aaPredicted RBP12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 IGHV1-69-2A0A0G2JMI3 117 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 IGHV3-7P01780 117 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 ZNF672Q499Z4 452 aaPredicted RBP12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 BTNL3Q6UXE8 466 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 ABHD14BQ96IU4 210 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 C15orf65H3BRN8 121 aa12.06□□□□□ -0.48
SHCBP1-201ENST00000303383 UQCRFS1P47985 274 aa12.06□□□□□ -0.48
SHCBP1-201ENST00000303383 Q3ZCU0 254 aa12.06□□□□□ -0.48
SHCBP1-201ENST00000303383 C4orf17Q53FE4 359 aa12.06□□□□□ -0.48
SHCBP1-201ENST00000303383 FAM209BQ5JX69 171 aa12.06□□□□□ -0.48
SHCBP1-201ENST00000303383 H1FXQ92522 213 aaKnown RBP12.06□□□□□ -0.48
SHCBP1-201ENST00000303383 hADV38S2A0JD32 116 aa12.06□□□□□ -0.48
SHCBP1-201ENST00000303383 CLDN14O95500 239 aa12.06□□□□□ -0.48
SHCBP1-201ENST00000303383 ZNF124Q15973 351 aa12.06□□□□□ -0.48
SHCBP1-201ENST00000303383 PLEKHA2Q9HB19 425 aa12.06□□□□□ -0.48
SHCBP1-201ENST00000303383 RCL1Q9Y2P8 373 aaKnown RBP12.06□□□□□ -0.48
SHCBP1-201ENST00000303383 NDUFB3O43676 98 aa12.06□□□□□ -0.48
SHCBP1-201ENST00000303383 NXPH3O95157 252 aa12.06□□□□□ -0.48
SHCBP1-201ENST00000303383 CLDN1O95832 211 aa12.06□□□□□ -0.48
SHCBP1-201ENST00000303383 AQP10Q96PS8 301 aa12.06□□□□□ -0.48
SHCBP1-201ENST00000303383 ARFGEF3Q5TH69 2177 aa12.05□□□□□ -0.48
SHCBP1-201ENST00000303383 MSGN1A6NI15 193 aa12.05□□□□□ -0.48
SHCBP1-201ENST00000303383 LYL1P12980 280 aa12.05□□□□□ -0.48
SHCBP1-201ENST00000303383 TPT1P13693 172 aaKnown RBP12.05□□□□□ -0.48
SHCBP1-201ENST00000303383 LRRC10Q5BKY1 277 aa12.05□□□□□ -0.48
SHCBP1-201ENST00000303383 EIF5AP63241 154 aaKnown RBP12.05□□□□□ -0.48
SHCBP1-201ENST00000303383 POMT1Q9Y6A1 747 aa12.05□□□□□ -0.48
SHCBP1-201ENST00000303383 ATG12O94817 140 aa12.05□□□□□ -0.48
SHCBP1-201ENST00000303383 IGLV2-14P01704 120 aa12.05□□□□□ -0.48
SHCBP1-201ENST00000303383 LPAR6P43657 344 aa12.05□□□□□ -0.48
SHCBP1-201ENST00000303383 CAV2P51636 162 aa12.05□□□□□ -0.48
SHCBP1-201ENST00000303383 MORN2Q502X0 79 aa12.05□□□□□ -0.48
SHCBP1-201ENST00000303383 MAGT1Q9H0U3 335 aa12.05□□□□□ -0.48
SHCBP1-201ENST00000303383 KBTBD11-OT1A0A1B0GTJ5 212 aa12.04□□□□□ -0.48
SHCBP1-201ENST00000303383 RPL31P62899 125 aaKnown RBP12.04□□□□□ -0.48
SHCBP1-201ENST00000303383 ZNF816Q0VGE8 651 aaPredicted RBP12.04□□□□□ -0.48
SHCBP1-201ENST00000303383 MST1LQ2TV78 715 aa12.04□□□□□ -0.48
SHCBP1-201ENST00000303383 CLLU1Q5K131 121 aa12.04□□□□□ -0.48
SHCBP1-201ENST00000303383 C16orf54Q6UWD8 224 aa12.04□□□□□ -0.48
SHCBP1-201ENST00000303383 SPAG16Q8N0X2 631 aa12.04□□□□□ -0.48
SHCBP1-201ENST00000303383 NCOR1P1Q9H4R4 102 aa12.04□□□□□ -0.48
SHCBP1-201ENST00000303383 CLN8Q9UBY8 286 aa12.04□□□□□ -0.48
SHCBP1-201ENST00000303383 SIAH2O43255 324 aa12.04□□□□□ -0.48
SHCBP1-201ENST00000303383 SSSCA1O60232 199 aa12.04□□□□□ -0.48
SHCBP1-201ENST00000303383 YPEL1O60688 119 aa12.04□□□□□ -0.48
SHCBP1-201ENST00000303383 YPEL2Q96QA6 119 aa12.04□□□□□ -0.48
SHCBP1-201ENST00000303383 SMIM3Q9BZL3 60 aa12.04□□□□□ -0.48
SHCBP1-201ENST00000303383 YLPM1P49750 1951 aaKnown RBP12.04□□□□□ -0.48
SHCBP1-201ENST00000303383 ZNF729A6NN14 1252 aaPredicted RBP12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 OR4D5Q8NGN0 318 aa12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 HSD17B10Q99714 261 aaKnown RBP12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 TOLLIPQ9H0E2 274 aa12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 RAB1BQ9H0U4 201 aa12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 TAAR5O14804 337 aa12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 HKR1P10072 659 aa12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 RAB7AP51149 207 aa12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 NMSQ5H8A3 153 aa12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 GAL3ST2Q9H3Q3 398 aa12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 SDHAF2Q9NX18 166 aa12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 USF3Q68DE3 2245 aa12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 F2RL2O00254 374 aa12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 RBMXL2O75526 392 aaKnown RBP12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 ZNF66Q6ZN08 573 aa12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 CCDC28AQ8IWP9 274 aa12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 GPR146Q96CH1 333 aa12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 CACNG5Q9UF02 275 aa12.03□□□□□ -0.48
SHCBP1-201ENST00000303383 RAI1Q7Z5J4 1906 aaPredicted RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms