RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 SPIN2BQ9BPZ2 258 aa18.46■□□□□ 0.55
SMAD1-201ENST00000302085 GNG12Q9UBI6 72 aa18.46■□□□□ 0.55
SMAD1-201ENST00000302085 POMT1Q9Y6A1 747 aa18.46■□□□□ 0.55
SMAD1-201ENST00000302085 NKX6-3A6NJ46 265 aa18.46■□□□□ 0.55
SMAD1-201ENST00000302085 TMPRSS2O15393 492 aa18.46■□□□□ 0.55
SMAD1-201ENST00000302085 DMBX1Q8NFW5 382 aa18.46■□□□□ 0.55
SMAD1-201ENST00000302085 GPR146Q96CH1 333 aa18.46■□□□□ 0.55
SMAD1-201ENST00000302085 ZFP57Q9NU63 452 aa18.46■□□□□ 0.55
SMAD1-201ENST00000302085 LIN7CQ9NUP9 197 aaKnown RBP18.46■□□□□ 0.55
SMAD1-201ENST00000302085 NBEAQ8NFP9 2946 aa18.45■□□□□ 0.54
SMAD1-201ENST00000302085 KBTBD11-OT1A0A1B0GTJ5 212 aa18.45■□□□□ 0.54
SMAD1-201ENST00000302085 LINC00862A6NCI5 91 aa18.45■□□□□ 0.54
SMAD1-201ENST00000302085 RNF212BA8MTL3 300 aa18.45■□□□□ 0.54
SMAD1-201ENST00000302085 E5RGE8 158 aa18.45■□□□□ 0.54
SMAD1-201ENST00000302085 ZG16O60844 167 aa18.45■□□□□ 0.54
SMAD1-201ENST00000302085 RPL12P30050 165 aaKnown RBP18.45■□□□□ 0.54
SMAD1-201ENST00000302085 UTF1Q5T230 341 aa18.45■□□□□ 0.54
SMAD1-201ENST00000302085 SDHAF2Q9NX18 166 aa18.45■□□□□ 0.54
SMAD1-201ENST00000302085 CLN8Q9UBY8 286 aa18.45■□□□□ 0.54
SMAD1-201ENST00000302085 RCL1Q9Y2P8 373 aaKnown RBP18.45■□□□□ 0.54
SMAD1-201ENST00000302085 NSG2Q9Y328 171 aa18.45■□□□□ 0.54
SMAD1-201ENST00000302085 DSCAML1Q8TD84 2053 aa18.45■□□□□ 0.54
SMAD1-201ENST00000302085 HIVEP3Q5T1R4 2406 aa18.44■□□□□ 0.54
SMAD1-201ENST00000302085 TRGV10A0A0A0MS01 117 aa18.44■□□□□ 0.54
SMAD1-201ENST00000302085 IGHV1-69-2A0A0G2JMI3 117 aa18.44■□□□□ 0.54
SMAD1-201ENST00000302085 FCN3O75636 299 aa18.44■□□□□ 0.54
SMAD1-201ENST00000302085 RAB14P61106 215 aa18.44■□□□□ 0.54
SMAD1-201ENST00000302085 CXorf66Q5JRM2 361 aaPredicted RBP18.44■□□□□ 0.54
SMAD1-201ENST00000302085 BTNL3Q6UXE8 466 aa18.44■□□□□ 0.54
SMAD1-201ENST00000302085 CORO2AQ92828 525 aa18.44■□□□□ 0.54
SMAD1-201ENST00000302085 CLDN14O95500 239 aa18.44■□□□□ 0.54
SMAD1-201ENST00000302085 IGKV1-5P01602 117 aa18.44■□□□□ 0.54
SMAD1-201ENST00000302085 ZNF134P52741 427 aa18.44■□□□□ 0.54
SMAD1-201ENST00000302085 THOC7Q6I9Y2 204 aaKnown RBP18.44■□□□□ 0.54
SMAD1-201ENST00000302085 LYPD2Q6UXB3 125 aa18.44■□□□□ 0.54
SMAD1-201ENST00000302085 ITLN2Q8WWU7 325 aaPredicted RBP18.44■□□□□ 0.54
SMAD1-201ENST00000302085 EDARADDQ8WWZ3 215 aa18.44■□□□□ 0.54
SMAD1-201ENST00000302085 C11orf1Q9H5F2 150 aa18.44■□□□□ 0.54
SMAD1-201ENST00000302085 NDUFB7P17568 137 aa18.43■□□□□ 0.54
SMAD1-201ENST00000302085 S100A1P23297 94 aa18.43■□□□□ 0.54
SMAD1-201ENST00000302085 LPAR6P43657 344 aa18.43■□□□□ 0.54
SMAD1-201ENST00000302085 NKX2-1P43699 371 aaPredicted RBP18.43■□□□□ 0.54
SMAD1-201ENST00000302085 BRWD1-AS2P59051 145 aa18.43■□□□□ 0.54
SMAD1-201ENST00000302085 ID3Q02535 119 aa18.43■□□□□ 0.54
SMAD1-201ENST00000302085 IZUMO4Q1ZYL8 232 aa18.43■□□□□ 0.54
SMAD1-201ENST00000302085 PLEKHA2Q9HB19 425 aa18.43■□□□□ 0.54
SMAD1-201ENST00000302085 SLC25A10Q9UBX3 287 aaPredicted RBP18.43■□□□□ 0.54
SMAD1-201ENST00000302085 PIGBOS1A0A0B4J2F0 54 aa18.42■□□□□ 0.54
SMAD1-201ENST00000302085 PROP1O75360 226 aa18.42■□□□□ 0.54
SMAD1-201ENST00000302085 PITX3O75364 302 aa18.42■□□□□ 0.54
SMAD1-201ENST00000302085 IGHV3-7P01780 117 aa18.42■□□□□ 0.54
SMAD1-201ENST00000302085 Q6ZRM9 215 aa18.42■□□□□ 0.54
SMAD1-201ENST00000302085 LSM10Q969L4 123 aaKnown RBP18.42■□□□□ 0.54
SMAD1-201ENST00000302085 LINC00574Q9H8X3 128 aa18.42■□□□□ 0.54
SMAD1-201ENST00000302085 TANC2Q9HCD6 1990 aa18.42■□□□□ 0.54
SMAD1-201ENST00000302085 A0A1B0GU03 582 aa18.42■□□□□ 0.54
SMAD1-201ENST00000302085 SLC25A6P12236 298 aa18.42■□□□□ 0.54
SMAD1-201ENST00000302085 POLR2GP62487 172 aaKnown RBP eCLIP18.42■□□□□ 0.54
SMAD1-201ENST00000302085 Q3ZCU0 254 aa18.42■□□□□ 0.54
SMAD1-201ENST00000302085 STOML3Q8TAV4 291 aa18.42■□□□□ 0.54
SMAD1-201ENST00000302085 ZC4H2Q9NQZ6 224 aa18.42■□□□□ 0.54
SMAD1-201ENST00000302085 GFOD1Q9NXC2 390 aa18.42■□□□□ 0.54
SMAD1-201ENST00000302085 C17orf98A8MV24 154 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 RAMP3O60896 148 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 CLDN1O95832 211 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 EPHA1P21709 976 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 P2RY1P47900 373 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 LINC00205P59089 165 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 LEAP2Q969E1 77 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 MAGT1Q9H0U3 335 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 RAB9BQ9NP90 201 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 RELNP78509 3460 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 ZNF729A6NN14 1252 aaPredicted RBP18.41■□□□□ 0.54
SMAD1-201ENST00000302085 NMBP08949 121 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 COL8A2P25067 703 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 GPR12P47775 334 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 OR2B11Q5JQS5 317 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 ZNF66Q6ZN08 573 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 FAM216AQ8WUB2 273 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 BSCL2Q96G97 398 aaPredicted RBP18.41■□□□□ 0.54
SMAD1-201ENST00000302085 C19orf12Q9NSK7 152 aa18.41■□□□□ 0.54
SMAD1-201ENST00000302085 hADV38S2A0JD32 116 aa18.4■□□□□ 0.54
SMAD1-201ENST00000302085 LINC00473A8K010 186 aa18.4■□□□□ 0.54
SMAD1-201ENST00000302085 SLC31A2O15432 143 aa18.4■□□□□ 0.54
SMAD1-201ENST00000302085 CATR1Q13166 79 aa18.4■□□□□ 0.54
SMAD1-201ENST00000302085 TCTEX1D2Q8WW35 142 aa18.4■□□□□ 0.54
SMAD1-201ENST00000302085 IFI27L2Q9H2X8 130 aa18.4■□□□□ 0.54
SMAD1-201ENST00000302085 IDI2-AS1Q9NZ38 188 aa18.4■□□□□ 0.54
SMAD1-201ENST00000302085 AUP1Q9Y679 476 aa18.4■□□□□ 0.54
SMAD1-201ENST00000302085 KIAA1324LA8MWY0 1029 aaPredicted RBP18.39■□□□□ 0.53
SMAD1-201ENST00000302085 LEUTXA8MZ59 168 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 LYNX1G3V0Z9 82 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 GPR137BO60478 399 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 MMP23AO75900 390 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 LYNX1P0DP58 116 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 AGAP20933 346 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 HFEQ30201 348 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 GPR157Q5UAW9 335 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 CLEC9AQ6UXN8 241 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 RNASE11Q8TAA1 199 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms