RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 INSIG2Q9Y5U4 225 aa12.33□□□□□ -0.44
UBXN1-202ENST00000301935 PKD1L1Q8TDX9 2849 aa12.33□□□□□ -0.44
UBXN1-202ENST00000301935 FAM172BPA6NC97 362 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 LUMP51884 338 aaPredicted RBP12.32□□□□□ -0.44
UBXN1-202ENST00000301935 ARF6P62330 175 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 PAX8Q06710 450 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 RBMS2Q15434 407 aaKnown RBP12.32□□□□□ -0.44
UBXN1-202ENST00000301935 MSMO1Q15800 293 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 SCGB2B2Q4G0G5 96 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 PRAMEF5Q5TYX0 476 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 NCR3LG1Q68D85 454 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 RBMS3Q6XE24 437 aaKnown RBP12.32□□□□□ -0.44
UBXN1-202ENST00000301935 LHFPL1Q86WI0 220 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 C11orf42Q8N5U0 333 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 SIGLECL1Q8N7X8 197 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 MINDY2Q8NBR6 621 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 DUSP18Q8NEJ0 188 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 OR52L2PQ8NGH6 319 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 OR4D10Q8NGI6 311 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 ENKURQ8TC29 256 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 TMEM133Q9H2Q1 129 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 RDH8Q9NYR8 311 aa12.32□□□□□ -0.44
UBXN1-202ENST00000301935 DNAJC9-AS1A6NH13 148 aa12.31□□□□□ -0.44
UBXN1-202ENST00000301935 PPYP01298 95 aa12.31□□□□□ -0.44
UBXN1-202ENST00000301935 OMGP23515 440 aa12.31□□□□□ -0.44
UBXN1-202ENST00000301935 NFYBP25208 207 aa12.31□□□□□ -0.44
UBXN1-202ENST00000301935 PRRX1P54821 245 aa12.31□□□□□ -0.44
UBXN1-202ENST00000301935 PLA1AQ53H76 456 aa12.31□□□□□ -0.44
UBXN1-202ENST00000301935 IDO2Q6ZQW0 420 aa12.31□□□□□ -0.44
UBXN1-202ENST00000301935 LINC00311Q8N616 119 aa12.31□□□□□ -0.44
UBXN1-202ENST00000301935 OR2AK2Q8NG84 335 aa12.31□□□□□ -0.44
UBXN1-202ENST00000301935 ZFAND1Q8TCF1 268 aa12.31□□□□□ -0.44
UBXN1-202ENST00000301935 MOB3AQ96BX8 217 aa12.31□□□□□ -0.44
UBXN1-202ENST00000301935 MMP26Q9NRE1 261 aa12.31□□□□□ -0.44
UBXN1-202ENST00000301935 OR1A1Q9P1Q5 309 aa12.31□□□□□ -0.44
UBXN1-202ENST00000301935 RBM7Q9Y580 266 aaKnown RBP12.31□□□□□ -0.44
UBXN1-202ENST00000301935 MEX3AA1L020 520 aaKnown RBP12.3□□□□□ -0.44
UBXN1-202ENST00000301935 TOX4O94842 621 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 AADACP22760 399 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 NFYAP23511 347 aaPredicted RBP12.3□□□□□ -0.44
UBXN1-202ENST00000301935 S100GP29377 79 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 PPP1CCP36873 323 aaKnown RBP12.3□□□□□ -0.44
UBXN1-202ENST00000301935 LTC4SQ16873 150 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 FAAP20Q6NZ36 180 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 ABHD12Q8N2K0 398 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 Q8N7P7 452 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 ZBTB34Q8NCN2 500 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 OR10V1Q8NGI7 309 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 OR9G1Q8NH87 305 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 UBALD1Q8TB05 177 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 ZNF596Q8TC21 504 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 CREB3L1Q96BA8 519 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 ZNF486Q96H40 463 aaPredicted RBP12.3□□□□□ -0.44
UBXN1-202ENST00000301935 DUX5Q96PT3 197 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 SIRPDQ9H106 197 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 NUP50Q9UKX7 468 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 GAB2Q9UQC2 676 aa12.3□□□□□ -0.44
UBXN1-202ENST00000301935 IGHV3-43A0A0B4J1X8 118 aa12.29□□□□□ -0.44
UBXN1-202ENST00000301935 TOR1AO14656 332 aa12.29□□□□□ -0.44
UBXN1-202ENST00000301935 MMP23AO75900 390 aa12.29□□□□□ -0.44
UBXN1-202ENST00000301935 NDUFB6O95139 128 aa12.29□□□□□ -0.44
UBXN1-202ENST00000301935 IGHV3-43DP0DP04 118 aa12.29□□□□□ -0.44
UBXN1-202ENST00000301935 BTCP35070 178 aa12.29□□□□□ -0.44
UBXN1-202ENST00000301935 KLF17Q5JT82 389 aaPredicted RBP12.29□□□□□ -0.44
UBXN1-202ENST00000301935 AADACL3Q5VUY0 350 aa12.29□□□□□ -0.44
UBXN1-202ENST00000301935 PLET1Q6UQ28 207 aa12.29□□□□□ -0.44
UBXN1-202ENST00000301935 SLC25A48Q6ZT89 311 aaKnown RBP12.29□□□□□ -0.44
UBXN1-202ENST00000301935 C5orf24Q7Z6I8 188 aa12.29□□□□□ -0.44
UBXN1-202ENST00000301935 SLC38A6Q8IZM9 456 aa12.29□□□□□ -0.44
UBXN1-202ENST00000301935 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.29□□□□□ -0.44
UBXN1-202ENST00000301935 BEND2Q8NDZ0 799 aa12.29□□□□□ -0.44
UBXN1-202ENST00000301935 AKR1E2Q96JD6 320 aa12.29□□□□□ -0.44
UBXN1-202ENST00000301935 ZNF48Q96MX3 618 aaPredicted RBP12.29□□□□□ -0.44
UBXN1-202ENST00000301935 CLEC7AQ9BXN2 247 aa12.29□□□□□ -0.44
UBXN1-202ENST00000301935 NUBP2Q9Y5Y2 271 aa12.29□□□□□ -0.44
UBXN1-202ENST00000301935 AUP1Q9Y679 476 aa12.29□□□□□ -0.44
UBXN1-202ENST00000301935 OR5H14A6NHG9 310 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 J3QR06 171 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 TCRBP04435 133 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 RNASE1P07998 156 aaKnown RBP12.28□□□□□ -0.44
UBXN1-202ENST00000301935 MMP9P14780 707 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 PGAM2P15259 253 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 IL3RAP26951 378 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 RAG2P55895 527 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 BAMBIQ13145 260 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 GNMTQ14749 295 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 PDLIM3Q53GG5 364 aaPredicted RBP12.28□□□□□ -0.44
UBXN1-202ENST00000301935 C11orf88Q6PI97 169 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 TREML4Q6UXN2 200 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 VMO1Q7Z5L0 202 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 NRARPQ7Z6K4 114 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 CMTM1Q8IZ96 169 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 ZNF439Q8NDP4 499 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 OR11H6Q8NGC7 330 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 OR13C8Q8NGS7 320 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 ABHD14AQ9BUJ0 271 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 SLC5A7Q9GZV3 580 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 PIPOXQ9P0Z9 390 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 ZNF221Q9UK13 617 aa12.28□□□□□ -0.44
UBXN1-202ENST00000301935 PSG11Q9UQ72 335 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms