RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 TPTE2P1Q5T6R2 138 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 LINC01551Q86U37 167 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 ZNF114Q8NC26 417 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 C20orf144Q9BQM9 153 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 FAM103A1Q9BTL3 118 aaKnown RBP11.06□□□□□ -0.64
TVP23A-201ENST00000299866 OR51B6Q9H340 312 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 FOXJ2Q9P0K8 574 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 DUX1O43812 170 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 WDR1O75083 606 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 IL6RP08887 468 aaPredicted RBP11.05□□□□□ -0.64
TVP23A-201ENST00000299866 CBLN1P23435 193 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 SOX8P57073 446 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 TFF3Q07654 80 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 ZNF324BQ6AW86 544 aaPredicted RBP11.05□□□□□ -0.64
TVP23A-201ENST00000299866 TMPRSS7Q7RTY8 843 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 CARFQ8N187 725 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 OR56B2PQ8NGI1 322 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 HLA-CQ95604 372 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 SAMD10Q9BYL1 202 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 A0A0J9YW62 118 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 SERF1AO75920 110 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 UMODP07911 640 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 ATP5G3P48201 142 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 OR5P3Q8WZ94 311 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 TMEM204Q9BSN7 226 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 WNT5BQ9H1J7 359 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 PIAS2O75928 621 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 VENTXO95231 258 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 IGHV3-9P01782 118 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 CELA2AP08217 269 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 SLC25A6P12236 298 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 CHRNB4P30926 498 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 THBS3P49746 956 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 GNB1P62873 340 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 MMDQ15546 238 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 COL5A1-AS1Q5SY13 56 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 Q6ZS49 121 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 SRXN1Q9BYN0 137 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 TMEM38BQ9NVV0 291 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 MTCH1Q9NZJ7 389 aa11.05□□□□□ -0.64
TVP23A-201ENST00000299866 EXPH5Q8NEV8 1989 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 OR6C6A6NF89 314 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 TRAPPC2LH3BP13 241 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 VAMP5O95183 116 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 CCL2P13500 99 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 FGF12P61328 243 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 TEX43Q6ZNM6 134 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 BAGE3Q86Y29 109 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 BAGE2Q86Y30 109 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 C7orf61Q8IZ16 206 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 ZNF709Q8N972 641 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 FADS6Q8N9I5 356 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 PSMF1Q92530 271 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 REPIN1Q9BWE0 567 aaKnown RBP11.04□□□□□ -0.64
TVP23A-201ENST00000299866 CLN8Q9UBY8 286 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 TP53TG3Q9ULZ0 132 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 YPEL1O60688 119 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 KRTDAPP60985 99 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 PRDX4Q13162 271 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 CEACAM16Q2WEN9 425 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 NUFIP2Q7Z417 695 aaKnown RBP11.04□□□□□ -0.64
TVP23A-201ENST00000299866 C17orf82Q86X59 251 aaPredicted RBP11.04□□□□□ -0.64
TVP23A-201ENST00000299866 YPEL2Q96QA6 119 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 OR2H1Q9GZK4 316 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 FGF23Q9GZV9 251 aaPredicted RBP11.04□□□□□ -0.64
TVP23A-201ENST00000299866 ASCL3Q9NQ33 180 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 ELOVL5Q9NYP7 299 aa11.04□□□□□ -0.64
TVP23A-201ENST00000299866 F2Z2F3 143 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 LMO7DNF2Z398 122 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 SYNGR1O43759 233 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 CRISP2P16562 243 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 COX5AP20674 150 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 MSMO1Q15800 293 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 SPINK9Q5DT21 86 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 TMEM144Q7Z5S9 345 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 MKXQ8IYA7 352 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 LSM10Q969L4 123 aaKnown RBP11.03□□□□□ -0.64
TVP23A-201ENST00000299866 CIB3Q96Q77 187 aaPredicted RBP11.03□□□□□ -0.64
TVP23A-201ENST00000299866 MDFIC2A0A1B0GVS7 189 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 RBFOX2O43251 390 aaKnown RBP eCLIP11.03□□□□□ -0.64
TVP23A-201ENST00000299866 KITLGP21583 273 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 ZNF585BQ52M93 769 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 OR5AU1Q8NGC0 362 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 TUBG2Q9NRH3 451 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 CHCHD2Q9Y6H1 151 aaPredicted RBP11.03□□□□□ -0.64
TVP23A-201ENST00000299866 C9orf135Q5VTT2 229 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 AAED1Q7RTV5 226 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 FOXB1Q99853 325 aa11.03□□□□□ -0.64
TVP23A-201ENST00000299866 MLNRO43193 412 aa11.02□□□□□ -0.64
TVP23A-201ENST00000299866 KRASP01116 189 aa11.02□□□□□ -0.64
TVP23A-201ENST00000299866 WNT2P09544 360 aa11.02□□□□□ -0.64
TVP23A-201ENST00000299866 UBE2NP61088 152 aaKnown RBP11.02□□□□□ -0.64
TVP23A-201ENST00000299866 ANKRD39Q53RE8 183 aa11.02□□□□□ -0.64
TVP23A-201ENST00000299866 GCSAMLQ5JQS6 135 aa11.02□□□□□ -0.64
TVP23A-201ENST00000299866 SLC23A3Q6PIS1 610 aa11.02□□□□□ -0.64
TVP23A-201ENST00000299866 OR1L1Q8NH94 360 aa11.02□□□□□ -0.64
TVP23A-201ENST00000299866 ZFP30Q9Y2G7 519 aa11.02□□□□□ -0.64
TVP23A-201ENST00000299866 TIMM9Q9Y5J7 89 aa11.02□□□□□ -0.64
TVP23A-201ENST00000299866 EYSQ5T1H1 3165 aa11.02□□□□□ -0.65
TVP23A-201ENST00000299866 TRAV34A0A0B4J273 112 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms