RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 IFNA1P01562 189 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 EIF2S3LQ2VIR3 472 aaKnown RBP11.46□□□□□ -0.57
CDH8-201ENST00000299345 ZNF585BQ52M93 769 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 DPPA3Q6W0C5 159 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 ACP7Q6ZNF0 438 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 CYB561D1Q8N8Q1 229 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 ZNF709Q8N972 641 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 C1orf162Q8NEQ5 155 aaPredicted RBP11.46□□□□□ -0.57
CDH8-201ENST00000299345 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.46□□□□□ -0.57
CDH8-201ENST00000299345 PSG11Q9UQ72 335 aa11.46□□□□□ -0.57
CDH8-201ENST00000299345 TNRC6AQ8NDV7 1962 aaKnown RBP11.46□□□□□ -0.57
CDH8-201ENST00000299345 WISP2O76076 250 aa11.46□□□□□ -0.58
CDH8-201ENST00000299345 SCAF4O95104 1147 aaKnown RBP11.46□□□□□ -0.58
CDH8-201ENST00000299345 RPS10P46783 165 aaKnown RBP11.46□□□□□ -0.58
CDH8-201ENST00000299345 GLIPR1P48060 266 aa11.46□□□□□ -0.58
CDH8-201ENST00000299345 SPSB3Q6PJ21 355 aa11.46□□□□□ -0.58
CDH8-201ENST00000299345 BHLHA15Q7RTS1 189 aaPredicted RBP11.46□□□□□ -0.58
CDH8-201ENST00000299345 RPRMQ9NS64 109 aa11.46□□□□□ -0.58
CDH8-201ENST00000299345 SLC39A9Q9NUM3 307 aa11.46□□□□□ -0.58
CDH8-201ENST00000299345 DIDO1Q9BTC0 2240 aaKnown RBP11.45□□□□□ -0.58
CDH8-201ENST00000299345 AHRRA9YTQ3 701 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 RAB5AP20339 215 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 ZNF83P51522 516 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 Q3ZCU0 254 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 WDR31Q8NA23 367 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 CELSR3Q9NYQ7 3312 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 IFNA17P01571 189 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 IGKV3-15P01624 115 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 FBP1P09467 338 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 HOXA4Q00056 320 aaPredicted RBP11.45□□□□□ -0.58
CDH8-201ENST00000299345 MUCL1Q96DR8 90 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 C12orf57Q99622 126 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 A0A1B0GW64 132 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 IFNA4P05014 189 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 CEACAM1P13688 526 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 TUBG1P23258 451 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 SSTR5P35346 364 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 FGF8P55075 233 aaPredicted RBP11.45□□□□□ -0.58
CDH8-201ENST00000299345 P2RY6Q15077 328 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 ACSF3Q4G176 576 aaPredicted RBP11.45□□□□□ -0.58
CDH8-201ENST00000299345 WDR82Q6UXN9 313 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 OR4C12Q96R67 309 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 TUBG2Q9NRH3 451 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 URGCP-MRPS24S4R325 110 aa11.45□□□□□ -0.58
CDH8-201ENST00000299345 M0R1B8 84 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 CRYAAP02489 173 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 HSPB1P04792 205 aaKnown RBP11.44□□□□□ -0.58
CDH8-201ENST00000299345 EDDM3BP56851 147 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 RPS16P62249 146 aaKnown RBP11.44□□□□□ -0.58
CDH8-201ENST00000299345 PINX1Q96BK5 328 aaKnown RBP11.44□□□□□ -0.58
CDH8-201ENST00000299345 TVP23CQ96ET8 276 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 ZNF891A8MT65 544 aaPredicted RBP11.44□□□□□ -0.58
CDH8-201ENST00000299345 FAM90A26D6RGX4 464 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 SRP19P09132 144 aaKnown RBP11.44□□□□□ -0.58
CDH8-201ENST00000299345 TNFRSF9Q07011 255 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 RNF212Q495C1 297 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 KHDC3LQ587J8 217 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 ZNF525Q8N782 197 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 OR10P1Q8NGE3 313 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 LHX4Q969G2 390 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 RAB39BQ96DA2 213 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 SCRT1Q9BWW7 348 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 RBKSQ9H477 322 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 TUBA4BQ9H853 241 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 LAMP3Q9UQV4 416 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 OTOGLQ3ZCN5 2332 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 ST8SIA5O15466 376 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 RAMP3O60896 148 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 PTBP3O95758 552 aaKnown RBP11.44□□□□□ -0.58
CDH8-201ENST00000299345 GPR12P47775 334 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 SELENOVP59797 346 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 TAAR6Q96RI8 345 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 FAM234AQ9H0X4 552 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 CLN8Q9UBY8 286 aa11.44□□□□□ -0.58
CDH8-201ENST00000299345 PTPRZ1P23471 2315 aaPredicted RBP11.43□□□□□ -0.58
CDH8-201ENST00000299345 ICE1Q9Y2F5 2266 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 IGHV2OR16-5A0A0B4J2B6 119 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 ZNF98A6NK75 572 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 GALR2O43603 387 aaPredicted RBP11.43□□□□□ -0.58
CDH8-201ENST00000299345 S1PR2O95136 353 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 WT1P19544 449 aaPredicted RBP11.43□□□□□ -0.58
CDH8-201ENST00000299345 PRDX2P32119 198 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 SERF2P84101 59 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 ZNF506Q5JVG8 444 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 ODF3L1Q8IXM7 274 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 EDARADDQ8WWZ3 215 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 KMT2EQ8IZD2 1858 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 NDUFA2O43678 99 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 IGLV2-14P01704 120 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 COX5AP20674 150 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 DLK1P80370 383 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 HEATR1Q9H583 2144 aaKnown RBP11.43□□□□□ -0.58
CDH8-201ENST00000299345 ZNF665Q9H7R5 613 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 ASCL3Q9NQ33 180 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 ICAM4Q14773 271 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 FAM53AQ6NSI3 398 aaPredicted RBP11.43□□□□□ -0.58
CDH8-201ENST00000299345 PIP4P1Q86T03 277 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 OR13A1Q8NGR1 328 aa11.43□□□□□ -0.58
CDH8-201ENST00000299345 DMDP11532 3685 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 CADP27708 2225 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms