RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 LIN7CQ9NUP9 197 aaKnown RBP9.73□□□□□ -0.85
TRUB1-201ENST00000298746 TMEM250H0YL14 139 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 M0QZK8 103 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 GGCTO75223 188 aaKnown RBP9.72□□□□□ -0.85
TRUB1-201ENST00000298746 CRISP2P16562 243 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 CRYGSP22914 178 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 MSMO1Q15800 293 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 TMEM183BQ1AE95 376 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 C1orf194Q5T5A4 169 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 C11orf1Q9H5F2 150 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 SIAH2O43255 324 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 MRPL33O75394 65 aaKnown RBP9.72□□□□□ -0.85
TRUB1-201ENST00000298746 SFTPCP11686 197 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 SLC25A6P12236 298 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 CDC34P49427 236 aaPredicted RBP9.72□□□□□ -0.85
TRUB1-201ENST00000298746 DSCR4P56555 118 aaPredicted RBP9.72□□□□□ -0.85
TRUB1-201ENST00000298746 ARF1P84077 181 aaKnown RBP9.72□□□□□ -0.85
TRUB1-201ENST00000298746 HTD2P86397 168 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 ACSM6Q6P461 480 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 PTPRSQ13332 1948 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 IGKV1-6A0A0C4DH72 117 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 MARCH11A6NNE9 402 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 ANKRD30BLA7E2S9 258 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 IGKV1D-33P01593 117 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 IGKV1-33P01594 117 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 P04436 131 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 C1QTNF9P0C862 333 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 G6PCP35575 357 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 CEACAM6P40199 344 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 SSR4P51571 173 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 FGF12P61328 243 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 TMPRSS7Q7RTY8 843 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 VASH2Q86V25 355 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 CPT1CQ8TCG5 803 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 WNT5BQ9H1J7 359 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 OPN3Q9H1Y3 402 aaPredicted RBP9.72□□□□□ -0.85
TRUB1-201ENST00000298746 CACNA1EQ15878 2313 aa9.72□□□□□ -0.85
TRUB1-201ENST00000298746 KIAA1324LA8MWY0 1029 aaPredicted RBP9.71□□□□□ -0.85
TRUB1-201ENST00000298746 RAC2P15153 192 aa9.71□□□□□ -0.85
TRUB1-201ENST00000298746 BTF3P20290 206 aaKnown RBP9.71□□□□□ -0.85
TRUB1-201ENST00000298746 CBLN1P23435 193 aa9.71□□□□□ -0.85
TRUB1-201ENST00000298746 SRP14P37108 136 aaKnown RBP9.71□□□□□ -0.85
TRUB1-201ENST00000298746 PDLIM3Q53GG5 364 aaPredicted RBP9.71□□□□□ -0.85
TRUB1-201ENST00000298746 C11orf42Q8N5U0 333 aa9.71□□□□□ -0.85
TRUB1-201ENST00000298746 SIGLECL1Q8N7X8 197 aa9.71□□□□□ -0.85
TRUB1-201ENST00000298746 TRAV38-1A0A0B4J264 116 aa9.71□□□□□ -0.86
TRUB1-201ENST00000298746 NAPSAO96009 420 aa9.71□□□□□ -0.86
TRUB1-201ENST00000298746 RAC1P63000 192 aa9.71□□□□□ -0.86
TRUB1-201ENST00000298746 PLP2Q04941 152 aa9.71□□□□□ -0.86
TRUB1-201ENST00000298746 LTC4SQ16873 150 aa9.71□□□□□ -0.86
TRUB1-201ENST00000298746 ACTL10Q5JWF8 245 aa9.71□□□□□ -0.86
TRUB1-201ENST00000298746 SPATA46Q5T0L3 261 aa9.71□□□□□ -0.86
TRUB1-201ENST00000298746 RPS19BP1Q86WX3 136 aaKnown RBP9.71□□□□□ -0.86
TRUB1-201ENST00000298746 FGFRL1Q8N441 504 aa9.71□□□□□ -0.86
TRUB1-201ENST00000298746 ZIC4Q8N9L1 334 aa9.71□□□□□ -0.86
TRUB1-201ENST00000298746 ABHD3Q8WU67 409 aa9.71□□□□□ -0.86
TRUB1-201ENST00000298746 ZCCHC14Q8WYQ9 949 aaKnown RBP9.71□□□□□ -0.86
TRUB1-201ENST00000298746 NINJ1Q92982 152 aa9.71□□□□□ -0.86
TRUB1-201ENST00000298746 MTCH1Q9NZJ7 389 aa9.71□□□□□ -0.86
TRUB1-201ENST00000298746 ZNF391Q9UJN7 358 aa9.71□□□□□ -0.86
TRUB1-201ENST00000298746 CHCHD2Q9Y6H1 151 aaPredicted RBP9.71□□□□□ -0.86
TRUB1-201ENST00000298746 FCN1O00602 326 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 AQP7O14520 342 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 SYNGR4O95473 234 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 WIPI1Q5MNZ9 446 aaPredicted RBP9.7□□□□□ -0.86
TRUB1-201ENST00000298746 C20orf204Q6ZNR8 217 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 DERL1Q9BUN8 251 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 CHRNA10Q9GZZ6 450 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 TPRP12270 2363 aaKnown RBP9.7□□□□□ -0.86
TRUB1-201ENST00000298746 C17orf112F2Z3M2 114 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 PMCHP20382 165 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 TFF3Q07654 80 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 IGFBP7Q16270 282 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 OR5AU1Q8NGC0 362 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 TMEM147Q9BVK8 224 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 RIMS4Q9H426 269 aaPredicted RBP9.7□□□□□ -0.86
TRUB1-201ENST00000298746 NUPR1O60356 82 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 LIFP15018 202 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 NTF3P20783 257 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 ATP5G3P48201 142 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 HAPLN4Q86UW8 402 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 FAM58AQ8N1B3 248 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 PLPPR2Q96GM1 343 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 DIRC2Q96SL1 478 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 FAM234AQ9H0X4 552 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 IL36GQ9NZH8 169 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 TRANK1O15050 2925 aa9.7□□□□□ -0.86
TRUB1-201ENST00000298746 GDF1P27539 372 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 CD82P27701 267 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 RAC3P60763 192 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 RNF151Q2KHN1 245 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 TDRG1Q3Y452 100 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 SLC23A3Q6PIS1 610 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 TECTBQ96PL2 329 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 CIB3Q96Q77 187 aaPredicted RBP9.69□□□□□ -0.86
TRUB1-201ENST00000298746 KCNIP1Q9NZI2 227 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 PI4KAP42356 2102 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 GDF9O60383 454 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 IGKV1-5P01602 117 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 SELEP16581 610 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms