RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 OR3A1P47881 315 aa16.57■□□□□ 0.24
NFIL3-201ENST00000297689 RPS23P62266 143 aaKnown RBP16.57■□□□□ 0.24
NFIL3-201ENST00000297689 MSMO1Q15800 293 aa16.57■□□□□ 0.24
NFIL3-201ENST00000297689 LRRC75BQ2VPJ9 315 aa16.57■□□□□ 0.24
NFIL3-201ENST00000297689 KHDC3LQ587J8 217 aa16.57■□□□□ 0.24
NFIL3-201ENST00000297689 FIP1L1Q6UN15 594 aaKnown RBP16.57■□□□□ 0.24
NFIL3-201ENST00000297689 MBD3L1Q8WWY6 194 aa16.57■□□□□ 0.24
NFIL3-201ENST00000297689 GALMQ96C23 342 aa16.57■□□□□ 0.24
NFIL3-201ENST00000297689 KCNIP1Q9NZI2 227 aa16.57■□□□□ 0.24
NFIL3-201ENST00000297689 PRRC2CQ9Y520 2896 aaKnown RBP16.57■□□□□ 0.24
NFIL3-201ENST00000297689 A0A1W2PPE2 198 aa16.57■□□□□ 0.24
NFIL3-201ENST00000297689 OOEPA6NGQ2 149 aa16.57■□□□□ 0.24
NFIL3-201ENST00000297689 ARG1P05089 322 aa16.57■□□□□ 0.24
NFIL3-201ENST00000297689 METTL15P1P0C7V9 234 aa16.57■□□□□ 0.24
NFIL3-201ENST00000297689 CECR9P0C854 216 aa16.57■□□□□ 0.24
NFIL3-201ENST00000297689 RPL30P62888 115 aaKnown RBP16.57■□□□□ 0.24
NFIL3-201ENST00000297689 HOXA4Q00056 320 aaPredicted RBP16.57■□□□□ 0.24
NFIL3-201ENST00000297689 CNEP1R1Q8N9A8 125 aa16.57■□□□□ 0.24
NFIL3-201ENST00000297689 OR10G4Q8NGN3 311 aa16.57■□□□□ 0.24
NFIL3-201ENST00000297689 TAAR6Q96RI8 345 aa16.57■□□□□ 0.24
NFIL3-201ENST00000297689 RSG1Q9BU20 258 aa16.57■□□□□ 0.24
NFIL3-201ENST00000297689 PUS1Q9Y606 427 aaKnown RBP eCLIP16.57■□□□□ 0.24
NFIL3-201ENST00000297689 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.56■□□□□ 0.24
NFIL3-201ENST00000297689 H3BQ15 152 aa16.56■□□□□ 0.24
NFIL3-201ENST00000297689 GFRA3O60609 400 aa16.56■□□□□ 0.24
NFIL3-201ENST00000297689 ZNF16P17020 682 aaPredicted RBP16.56■□□□□ 0.24
NFIL3-201ENST00000297689 FOXF2Q12947 444 aa16.56■□□□□ 0.24
NFIL3-201ENST00000297689 FAM53AQ6NSI3 398 aaPredicted RBP16.56■□□□□ 0.24
NFIL3-201ENST00000297689 TMEM14EPQ6UXP3 125 aa16.56■□□□□ 0.24
NFIL3-201ENST00000297689 HSPB7Q9UBY9 170 aa16.56■□□□□ 0.24
NFIL3-201ENST00000297689 IFNL4K9M1U5 179 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 HBZP02008 142 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 AKR1D1P51857 326 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 PAX5Q02548 391 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 AESQ08117 197 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 ZNF726P1Q15940 193 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 CXorf67Q86X51 503 aaPredicted RBP16.55■□□□□ 0.24
NFIL3-201ENST00000297689 FAM24BQ8N5W8 94 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 DKK4Q9UBT3 224 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 SPENQ96T58 3664 aaKnown RBP16.55■□□□□ 0.24
NFIL3-201ENST00000297689 USF3Q68DE3 2245 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 LOC102723971A0A1B0GUV8 181 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 RAMP3O60896 148 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 CGAP01215 116 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 UBE2KP61086 200 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 SERF2P84101 59 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 TNFRSF9Q07011 255 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 CYB561D1Q8N8Q1 229 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 OR52L2PQ8NGH6 319 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 SARAFQ96BY9 339 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 VSIRQ9H7M9 311 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 RNF150Q9ULK6 438 aa16.55■□□□□ 0.24
NFIL3-201ENST00000297689 A0A087WWC5 75 aa16.54■□□□□ 0.24
NFIL3-201ENST00000297689 TNFSF13O75888 250 aa16.54■□□□□ 0.24
NFIL3-201ENST00000297689 FBP1P09467 338 aa16.54■□□□□ 0.24
NFIL3-201ENST00000297689 SNRPEP62304 92 aaKnown RBP16.54■□□□□ 0.24
NFIL3-201ENST00000297689 HBG1P69891 147 aa16.54■□□□□ 0.24
NFIL3-201ENST00000297689 HBG2P69892 147 aa16.54■□□□□ 0.24
NFIL3-201ENST00000297689 MBNL2Q5VZF2 373 aaKnown RBP16.54■□□□□ 0.24
NFIL3-201ENST00000297689 RAB39BQ96DA2 213 aa16.54■□□□□ 0.24
NFIL3-201ENST00000297689 MUCL1Q96DR8 90 aa16.54■□□□□ 0.24
NFIL3-201ENST00000297689 OR2D2Q9H210 308 aa16.54■□□□□ 0.24
NFIL3-201ENST00000297689 PTBP3O95758 552 aaKnown RBP16.54■□□□□ 0.24
NFIL3-201ENST00000297689 KRBOX4Q5JUW0 171 aa16.54■□□□□ 0.24
NFIL3-201ENST00000297689 PRAMEF6Q5VXH4 476 aa16.54■□□□□ 0.24
NFIL3-201ENST00000297689 CENPVQ7Z7K6 275 aaPredicted RBP16.54■□□□□ 0.24
NFIL3-201ENST00000297689 IQCF2Q8IXL9 164 aa16.54■□□□□ 0.24
NFIL3-201ENST00000297689 SCGB1C1Q8TD33 95 aa16.54■□□□□ 0.24
NFIL3-201ENST00000297689 OR4C12Q96R67 309 aa16.54■□□□□ 0.24
NFIL3-201ENST00000297689 BCL2L14Q9BZR8 327 aa16.54■□□□□ 0.24
NFIL3-201ENST00000297689 WDR61Q9GZS3 305 aaKnown RBP16.54■□□□□ 0.24
NFIL3-201ENST00000297689 ZNF71Q9NQZ8 489 aaPredicted RBP16.54■□□□□ 0.24
NFIL3-201ENST00000297689 CACNA1DQ01668 2161 aa16.53■□□□□ 0.24
NFIL3-201ENST00000297689 hCG_1809904A0A1W2PP81 198 aa16.53■□□□□ 0.24
NFIL3-201ENST00000297689 A0A1W2PPE3 182 aa16.53■□□□□ 0.24
NFIL3-201ENST00000297689 A0A1W2PR64 198 aa16.53■□□□□ 0.24
NFIL3-201ENST00000297689 A0A1W2PRV1 198 aa16.53■□□□□ 0.24
NFIL3-201ENST00000297689 UBE2CO00762 179 aa16.53■□□□□ 0.24
NFIL3-201ENST00000297689 IL2RGP31785 369 aa16.53■□□□□ 0.24
NFIL3-201ENST00000297689 RAB2AP61019 212 aa16.53■□□□□ 0.24
NFIL3-201ENST00000297689 EIF2S3LQ2VIR3 472 aaKnown RBP16.53■□□□□ 0.24
NFIL3-201ENST00000297689 LURAP1Q96LR2 239 aa16.53■□□□□ 0.24
NFIL3-201ENST00000297689 METRNQ9UJH8 293 aa16.53■□□□□ 0.24
NFIL3-201ENST00000297689 IGHV2OR16-5A0A0B4J2B6 119 aa16.52■□□□□ 0.24
NFIL3-201ENST00000297689 HOXC12P31275 282 aa16.52■□□□□ 0.24
NFIL3-201ENST00000297689 PMS2P11Q13670 270 aa16.52■□□□□ 0.24
NFIL3-201ENST00000297689 HEPN1Q6WQI6 88 aa16.52■□□□□ 0.24
NFIL3-201ENST00000297689 SSX7Q7RTT5 188 aa16.52■□□□□ 0.24
NFIL3-201ENST00000297689 ZNF429Q86V71 674 aa16.52■□□□□ 0.24
NFIL3-201ENST00000297689 C1QL4Q86Z23 238 aa16.52■□□□□ 0.24
NFIL3-201ENST00000297689 TCTEX1D1Q8N7M0 179 aa16.52■□□□□ 0.24
NFIL3-201ENST00000297689 FAM169BQ8N8A8 192 aa16.52■□□□□ 0.24
NFIL3-201ENST00000297689 STARD4Q96DR4 205 aa16.52■□□□□ 0.24
NFIL3-201ENST00000297689 C12orf57Q99622 126 aa16.52■□□□□ 0.24
NFIL3-201ENST00000297689 RBKSQ9H477 322 aa16.52■□□□□ 0.24
NFIL3-201ENST00000297689 IGHV1-18A0A0C4DH31 117 aa16.52■□□□□ 0.23
NFIL3-201ENST00000297689 AHRRA9YTQ3 701 aa16.52■□□□□ 0.23
NFIL3-201ENST00000297689 IGHV2-5P01817 119 aa16.52■□□□□ 0.23
NFIL3-201ENST00000297689 TFF1P04155 84 aa16.52■□□□□ 0.23
NFIL3-201ENST00000297689 ZNF718Q3SXZ3 478 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms