RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 PERPQ96FX8 193 aa10.3□□□□□ -0.76
SHROOM3-201ENST00000296043 PCDH15Q96QU1 1955 aa10.3□□□□□ -0.76
SHROOM3-201ENST00000296043 NUBP1P53384 320 aa10.3□□□□□ -0.76
SHROOM3-201ENST00000296043 DLEU1O43261 78 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 TMEM50AO95807 157 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 PPYP01298 95 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 DANCRP0C864 163 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 LPAL2Q16609 132 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 WFDC3Q8IUB2 231 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 OR2Z1Q8NG97 314 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 NHP2Q9NX24 153 aaKnown RBP10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 SORL1Q92673 2214 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 ATXN7O15265 892 aaPredicted RBP10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 MMD2Q8IY49 270 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 NRN1Q9NPD7 142 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 OGG1O15527 345 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 LINC00614P0C842 121 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 ISXQ2M1V0 245 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 PPP1R3EQ9H7J1 279 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 GREB1Q4ZG55 1949 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 HOXA5P20719 270 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 TMEM249Q2WGJ8 235 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 Q8IYB0 196 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 CD300LDQ6UXZ3 194 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 C5orf30Q96GV9 206 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 DOCK1Q14185 1865 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 MBNL2Q5VZF2 373 aaKnown RBP10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 PLAUP00749 431 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 NT5CQ8TCD5 201 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 Q9Y3F1 56 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 DOCK2Q92608 1830 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 PPIAL4EA0A075B759 164 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 PPIAL4FP0DN26 164 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 LPAR2Q9HBW0 351 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 PPIAL4AQ9Y536 164 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 ZNF236Q9UL36 1845 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 A0A0A6YYD5 115 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 PGPEP1LA6NFU8 196 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 TIMD4Q96H15 378 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 RTN4RQ9BZR6 473 aa10.29□□□□□ -0.76
SHROOM3-201ENST00000296043 PRR35P0CG20 571 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 PPICP45877 212 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 CYB561P49447 251 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 METRNLQ641Q3 311 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 NCOR1P1Q9H4R4 102 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 MESTQ5EB52 335 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 OR2V1Q8NHB1 315 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 HMGCLL1Q8TB92 370 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 M0QZ24 198 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 PSG1P11464 419 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 PXNP49023 591 aaPredicted RBP10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 COA4Q9NYJ1 87 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 NDUFA3O95167 84 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 EPPINO95925 133 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 BCORQ6W2J9 1755 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 OR8B12Q8NGG6 310 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 CNRIP1Q96F85 164 aaPredicted RBP10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 MRGPRX4Q96LA9 322 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 SSBP3Q9BWW4 388 aaPredicted RBP10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 MMP25Q9NPA2 562 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 SERF1AO75920 110 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 SERF2P84101 59 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 PSG6Q00889 435 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 PAQR9Q6ZVX9 377 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 BHLHA15Q7RTS1 189 aaPredicted RBP10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 PXMP4Q9Y6I8 212 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 HIST1H2BKO60814 126 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 HIST1H2BJP06899 126 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 HIST1H2BOP23527 126 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 HIST1H2BBP33778 126 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 HIST1H2BDP58876 126 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 HIST1H2BCP62807 126 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 HIST2H2BEQ16778 126 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 CEACAM16Q2WEN9 425 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 TCF23Q7RTU1 214 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 HIST1H2BHQ93079 126 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 HIST1H2BNQ99877 126 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 HIST1H2BMQ99879 126 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 PGPEP1Q9NXJ5 209 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 DNAJB12Q9NXW2 375 aaKnown RBP10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 LHFPL4Q7Z7J7 247 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 DLX6P56179 175 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 MIC13Q5XKP0 118 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 MOGAT3Q86VF5 341 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 C8orf44Q96CB5 159 aa10.28□□□□□ -0.76
SHROOM3-201ENST00000296043 TRAV21A0A0B4J279 112 aa10.27□□□□□ -0.76
SHROOM3-201ENST00000296043 A0A1W2PP11 408 aa10.27□□□□□ -0.76
SHROOM3-201ENST00000296043 HIST1H1AQ02539 215 aaPredicted RBP10.27□□□□□ -0.76
SHROOM3-201ENST00000296043 OR11H12B2RN74 326 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 RRHO14718 337 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 TMEM155Q4W5P6 130 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 UBALD2Q8IYN6 164 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 OR11H1Q8NG94 326 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 OR11H2Q8NH07 326 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 FGF13Q92913 245 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 CXCL16Q9H2A7 254 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 UBE2ZQ9H832 354 aaPredicted RBP10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 SPRY3O43610 288 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms