RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 CDKN1AP38936 164 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 THBS3P49746 956 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 TPPP2P59282 170 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 KRTDAPP60985 99 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 ZXDAP98168 799 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 TFF3Q07654 80 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 DAZAP2Q15038 168 aaPredicted RBP8.73□□□□□ -1.01
LMX1A-201ENST00000294816 TMEM183BQ1AE95 376 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 Q6ZSR3 168 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 WDYHV1Q96HA8 205 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 FOXB1Q99853 325 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 CHRNA10Q9GZZ6 450 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 WNT5BQ9H1J7 359 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 TMEM106BQ9NUM4 274 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 URB1O60287 2271 aaKnown RBP8.72□□□□□ -1.01
LMX1A-201ENST00000294816 SYNGR1O43759 233 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 KRASP01116 189 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 SERPINA7P05543 415 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 CBLN1P23435 193 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 GNG10P50151 68 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 HYAL1Q12794 435 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 TRA2AQ13595 282 aaKnown RBP eCLIP8.72□□□□□ -1.01
LMX1A-201ENST00000294816 YRDCQ86U90 279 aaKnown RBP8.72□□□□□ -1.01
LMX1A-201ENST00000294816 MIEN1Q9BRT3 115 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 OR2H1Q9GZK4 316 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 TMEM9BQ9NQ34 198 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 CRIM1Q9NZV1 1036 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 TRAV34A0A0B4J273 112 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 EPOPA6NHQ4 379 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 CCL3P10147 92 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 COX5AP20674 150 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 KITLGP21583 273 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 BRS3P32247 399 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 ATP5G3P48201 142 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 MRPL21Q7Z2W9 205 aaKnown RBP8.72□□□□□ -1.01
LMX1A-201ENST00000294816 MCEMP1Q8IX19 187 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 A0A096LPE4 126 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 IGLV3-32A0A0A0MS00 114 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 IGHV3-64DA0A0J9YX35 117 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 A0A1W2PPZ6 126 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 OR6C6A6NF89 314 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 CD82P27701 267 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 FGF12P61328 243 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 IGFBP7Q16270 282 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 FOXL2NBQ6ZUU3 175 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 Q6ZWC4 215 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 AKIRIN1Q9H9L7 192 aaPredicted RBP8.72□□□□□ -1.01
LMX1A-201ENST00000294816 DNAJC4Q9NNZ3 241 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 MTCH1Q9NZJ7 389 aa8.72□□□□□ -1.01
LMX1A-201ENST00000294816 F6UZH7 168 aa8.71□□□□□ -1.01
LMX1A-201ENST00000294816 NPPCP23582 126 aa8.71□□□□□ -1.01
LMX1A-201ENST00000294816 NTF4P34130 210 aa8.71□□□□□ -1.01
LMX1A-201ENST00000294816 ZNF90Q03938 601 aa8.71□□□□□ -1.01
LMX1A-201ENST00000294816 ZNF816Q0VGE8 651 aaPredicted RBP8.71□□□□□ -1.01
LMX1A-201ENST00000294816 SLC23A3Q6PIS1 610 aa8.71□□□□□ -1.01
LMX1A-201ENST00000294816 PCSK4Q6UW60 755 aa8.71□□□□□ -1.01
LMX1A-201ENST00000294816 NUFIP2Q7Z417 695 aaKnown RBP8.71□□□□□ -1.01
LMX1A-201ENST00000294816 BTF3L4Q96K17 158 aa8.71□□□□□ -1.01
LMX1A-201ENST00000294816 CHCHD2Q9Y6H1 151 aaPredicted RBP8.71□□□□□ -1.01
LMX1A-201ENST00000294816 R4GN57 208 aa8.71□□□□□ -1.01
LMX1A-201ENST00000294816 FAM186AA6NE01 2351 aa8.71□□□□□ -1.02
LMX1A-201ENST00000294816 CXCL13O43927 109 aa8.71□□□□□ -1.02
LMX1A-201ENST00000294816 SERF1AO75920 110 aa8.71□□□□□ -1.02
LMX1A-201ENST00000294816 CRISP2P16562 243 aa8.71□□□□□ -1.02
LMX1A-201ENST00000294816 RAB7AP51149 207 aa8.71□□□□□ -1.02
LMX1A-201ENST00000294816 CARD18P57730 90 aa8.71□□□□□ -1.02
LMX1A-201ENST00000294816 ZNF324BQ6AW86 544 aaPredicted RBP8.71□□□□□ -1.02
LMX1A-201ENST00000294816 FADS6Q8N9I5 356 aa8.71□□□□□ -1.02
LMX1A-201ENST00000294816 FOXJ2Q9P0K8 574 aa8.71□□□□□ -1.02
LMX1A-201ENST00000294816 PXMP4Q9Y6I8 212 aa8.71□□□□□ -1.02
LMX1A-201ENST00000294816 TRAV38-1A0A0B4J264 116 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 SPINK4O60575 86 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 TNFSF13O75888 250 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 TYMSP04818 313 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 CDC34P49427 236 aaPredicted RBP8.7□□□□□ -1.02
LMX1A-201ENST00000294816 RPL15P61313 204 aaKnown RBP8.7□□□□□ -1.02
LMX1A-201ENST00000294816 LCN2P80188 198 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 MRPS11P82912 194 aaKnown RBP8.7□□□□□ -1.02
LMX1A-201ENST00000294816 LINC01551Q86U37 167 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 ZNF808Q8N4W9 903 aaPredicted RBP8.7□□□□□ -1.02
LMX1A-201ENST00000294816 ZNF114Q8NC26 417 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 MRPS18CQ9Y3D5 142 aaKnown RBP8.7□□□□□ -1.02
LMX1A-201ENST00000294816 LINC00614P0C842 121 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 CD27P26842 260 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 FKBP2P26885 142 aaKnown RBP8.7□□□□□ -1.02
LMX1A-201ENST00000294816 CHRNB4P30926 498 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 G6PCP35575 357 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 EDDM3BP56851 147 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 TGFBR3Q03167 851 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 MSMO1Q15800 293 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 GCSAMLQ5JQS6 135 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 OR5AU1Q8NGC0 362 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 OR10P1Q8NGE3 313 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 TMEM147Q9BVK8 224 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 GPR35Q9HC97 309 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 TRAPPC2LQ9UL33 140 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 CACNA1DQ01668 2161 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 CFAP54Q96N23 3096 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 IGHV1OR15-9A0A0B4J2B8 117 aa8.7□□□□□ -1.02
LMX1A-201ENST00000294816 A0A1W2PPV4 95 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms