RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 NANOS3P60323 173 aaKnown RBP10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 EIF4E3Q8N5X7 224 aaKnown RBP10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 TMEM116Q8NCL8 245 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 MRGPRDQ8TDS7 321 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 ABHD17AQ96GS6 310 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 TLNRD1Q9H1K6 362 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 DCAF16Q9NXF7 216 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 THYN1Q9P016 225 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 APC2O95996 2303 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 PCOLCEQ15113 449 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 C16orf82Q7Z2V1 217 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 LDLRAD3Q86YD5 345 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 TGIF2LXQ8IUE1 241 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 OR4B1Q8NGF8 309 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 OR10D3Q8NH80 312 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 ABHD14BQ96IU4 210 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 DSPPQ9NZW4 1301 aa10.27□□□□□ -0.76
SYNGAP1-201ENST00000293748 SPRY3O43610 288 aa10.27□□□□□ -0.76
SYNGAP1-201ENST00000293748 TMEM50BP56557 158 aa10.27□□□□□ -0.76
SYNGAP1-201ENST00000293748 SKP2Q13309 424 aa10.27□□□□□ -0.76
SYNGAP1-201ENST00000293748 SPNS3Q6ZMD2 512 aa10.27□□□□□ -0.76
SYNGAP1-201ENST00000293748 CXorf67Q86X51 503 aaPredicted RBP10.27□□□□□ -0.76
SYNGAP1-201ENST00000293748 OR4A4PQ8NGN8 299 aa10.27□□□□□ -0.76
SYNGAP1-201ENST00000293748 APCSP02743 223 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 TRGC2P03986 189 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 MELTFP08582 738 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 SPINK9Q5DT21 86 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 MRGPRFQ96AM1 343 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 FBXO17Q96EF6 278 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 AQP10Q96PS8 301 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 OOEPA6NGQ2 149 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 IFITM10A6NMD0 228 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 SRSF10O75494 262 aaKnown RBP10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 BGLAPP02818 100 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 COL8A1P27658 744 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 FDX2Q6P4F2 183 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 C5orf17Q8NAS9 161 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 LRRC29Q8WV35 223 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 DOK5Q9P104 306 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 NAGKQ9UJ70 344 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 CES1P1Q9UKY3 287 aa10.27□□□□□ -0.77
SYNGAP1-201ENST00000293748 TRBV5-5A0A0J9YX44 114 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 PQLC2LA1A4F0 135 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 CDX1P47902 265 aaPredicted RBP10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 GNG10P50151 68 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 MRPS11P82912 194 aaKnown RBP10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 SRSF6Q13247 344 aaKnown RBP10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 TMEM252Q8N6L7 170 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 OR11H4Q8NGC9 324 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 MS4A3Q96HJ5 214 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 TP53RKQ96S44 253 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 OR5AC2Q9NZP5 309 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 GPR132Q9UNW8 380 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 OR2M5A3KFT3 312 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 ACTL6AO96019 429 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 HFEQ30201 348 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 Q56UQ5 140 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 ZAR1Q86SH2 424 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 FDCSPQ8NFU4 85 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 OR52L2PQ8NGH6 319 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 ZNF519Q8TB69 540 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 ADAT3Q96EY9 351 aaPredicted RBP10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 NPDC1Q9NQX5 325 aaPredicted RBP10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 KCNK7Q9Y2U2 307 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 CACNA1BQ00975 2339 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 J3QT63 122 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 ORM2P19652 201 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 GZMHP20718 246 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 KIR3DL2P43630 455 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 MGAT2Q10469 447 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 ZNF260Q3ZCT1 412 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 OR1P1Q8NH06 330 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 CXXC4Q9H2H0 198 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 SPTBN4Q9H254 2564 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 IGHV3-43A0A0B4J1X8 118 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 ATXN7O15265 892 aaPredicted RBP10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 IGHV3-43DP0DP04 118 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 BMI1P35226 326 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 ZFP36L2P47974 494 aaKnown RBP10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 SSMEM1Q8WWF3 244 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 RPEQ96AT9 228 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 SLC25A33Q9BSK2 321 aa10.26□□□□□ -0.77
SYNGAP1-201ENST00000293748 RPL36A-HNRNPH2H7BZ11 118 aa10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 PMELP40967 661 aa10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 LIMS1P48059 325 aa10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 HERVK_113P61574 105 aa10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 MEF2BQ02080 365 aaPredicted RBP10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 LINC00596Q86U02 117 aa10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 PERPQ96FX8 193 aa10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 P2RX4Q99571 388 aa10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 CDC42EP3Q9UKI2 254 aa10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 PRNDQ9UKY0 176 aa10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 OR2A4O95047 310 aa10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 PATE4P0C8F1 98 aa10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 PMCHL1Q16048 86 aa10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 SCGB1D4Q6XE38 83 aa10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 SLC25A38Q96DW6 304 aa10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 OR2A7Q96R45 310 aa10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 C5orf52A6NGY3 159 aa10.25□□□□□ -0.77
SYNGAP1-201ENST00000293748 HBZP02008 142 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms