RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 PIGYQ3MUY2 71 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 VN1R4Q7Z5H5 301 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 ANKRD37Q7Z713 158 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 OR1L8Q8NGR8 309 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 RAB1CQ92928 201 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 PAXXQ9BUH6 204 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 RPP25Q9BUL9 199 aaKnown RBP9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 CBLN4Q9NTU7 201 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 SIP14410 1827 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 PNLIPP16233 465 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 OTX1P32242 354 aaPredicted RBP9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 SRP14P37108 136 aaKnown RBP9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 RAC3P60763 192 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 TWIST1Q15672 202 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 DMRTA1Q5VZB9 504 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 MTURNQ8N3F0 131 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 C1RLQ9NZP8 487 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 J3QR06 171 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 KBTBD11O94819 623 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 KLK2P20151 261 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 CD200R1LQ6Q8B3 271 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 OR4D11Q8NGI4 311 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 C10orf35Q96D05 121 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 HIST1H4GQ99525 98 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 CDX2Q99626 313 aaPredicted RBP9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 LMX1BO60663 402 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 CISD3P0C7P0 127 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 EIF3IQ13347 325 aaKnown RBP9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 ZBTB34Q8NCN2 500 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 OR8B3Q8NGG8 313 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 TUBD1Q9UJT1 453 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 ZDHHC8Q9ULC8 765 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 SOX21Q9Y651 276 aaPredicted RBP9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 SVILO95425 2214 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 TRBV5-3A0A0A0MS03 114 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 IGHV3-21A0A0B4J1V1 117 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 J3QT63 122 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 SYNGR1O43759 233 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 ZNF735P0CB33 412 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 MAS1LP35410 378 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 ERVFRD-1P60508 538 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 MEF2BQ02080 365 aaPredicted RBP9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 SPEM1Q8N4L4 309 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 GAPDHP04406 335 aaKnown RBP9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 VSIG10L2P0DP72 767 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 GABRG2P18507 467 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 MPLP40238 635 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 ATG4DQ86TL0 474 aaPredicted RBP9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 HOGA1Q86XE5 327 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 TMEM252Q8N6L7 170 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 GMPPAQ96IJ6 420 aaPredicted RBP9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 INSIG2Q9Y5U4 225 aa9.36□□□□□ -0.91
PKNOX1-201ENST00000291547 HLA-DQA1P01909 254 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 IBA57Q5T440 356 aaKnown RBP9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 C1QL4Q86Z23 238 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 MRGPRX3Q96LB0 322 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 HDHD3Q9BSH5 251 aaPredicted RBP9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 ZNF665Q9H7R5 613 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 RNF122Q9H9V4 155 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 OR5AC2Q9NZP5 309 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 F2RL2O00254 374 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 CKS2P33552 79 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 NPBWR2P48146 333 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 ERASQ7Z444 233 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 A0A1B0GV72 72 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 CA11O75493 328 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 AGAP20933 346 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 WDR25Q64LD2 544 aaPredicted RBP9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 MOGAT3Q86VF5 341 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 WFDC3Q8IUB2 231 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 OR10S1Q8NGN2 331 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 WNT2BQ93097 391 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 ARRDC1-AS1Q9H2J1 176 aa9.35□□□□□ -0.91
PKNOX1-201ENST00000291547 TMEM189A5PLL7 270 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 FAM90A27PA6NNH2 459 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 H0YL77 283 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 HSPB1P04792 205 aaKnown RBP9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 ZP1P60852 638 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 C19orf54Q5BKX5 351 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 MAFAQ8NHW3 353 aaPredicted RBP9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 NPVFQ9HCQ7 196 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 SERGEFQ9UGK8 458 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 KCNE5Q9UJ90 142 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 DIDO1Q9BTC0 2240 aaKnown RBP9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 LIPT2A6NK58 231 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 HYPMO75409 117 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 RNASE1P07998 156 aaKnown RBP9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 CALHM1Q8IU99 346 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 FAM216AQ8WUB2 273 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 SEC16AO15027 2179 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 KLRB1Q12918 225 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 GUSBP11Q6P575 273 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 Q6ZS52 159 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 EID2BQ96D98 161 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 GUCD1Q96NT3 240 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 WNT5BQ9H1J7 359 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 TNFRSF19Q9NS68 423 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 KLK13Q9UKR3 277 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 HIGD1AQ9Y241 93 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 PXMP4Q9Y6I8 212 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms