RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 EBI3Q14213 229 aa21.56■■□□□ 1.04
SSU72-201ENST00000291386 DTX3Q8N9I9 347 aa21.56■■□□□ 1.04
SSU72-201ENST00000291386 OR56B4Q8NH76 319 aa21.56■■□□□ 1.04
SSU72-201ENST00000291386 RSL24D1Q9UHA3 163 aaKnown RBP21.56■■□□□ 1.04
SSU72-201ENST00000291386 MMP24Q9Y5R2 645 aa21.56■■□□□ 1.04
SSU72-201ENST00000291386 SAA2-SAA4A0A096LPE2 208 aa21.55■■□□□ 1.04
SSU72-201ENST00000291386 RAB29O14966 203 aa21.55■■□□□ 1.04
SSU72-201ENST00000291386 SAA2P0DJI9 122 aaPredicted RBP21.55■■□□□ 1.04
SSU72-201ENST00000291386 RAG2P55895 527 aa21.55■■□□□ 1.04
SSU72-201ENST00000291386 Q6ZSV7 163 aa21.55■■□□□ 1.04
SSU72-201ENST00000291386 BEST4Q8NFU0 473 aa21.55■■□□□ 1.04
SSU72-201ENST00000291386 OR4F5Q8NH21 305 aa21.55■■□□□ 1.04
SSU72-201ENST00000291386 ZNF251Q9BRH9 671 aa21.55■■□□□ 1.04
SSU72-201ENST00000291386 SLIRPQ9GZT3 109 aaKnown RBP21.55■■□□□ 1.04
SSU72-201ENST00000291386 RANBP3Q9H6Z4 567 aaPredicted RBP21.55■■□□□ 1.04
SSU72-201ENST00000291386 ANAPC10Q9UM13 185 aa21.55■■□□□ 1.04
SSU72-201ENST00000291386 A0A1B0GUS0 222 aa21.54■■□□□ 1.04
SSU72-201ENST00000291386 CCDC160A6NGH7 325 aa21.54■■□□□ 1.04
SSU72-201ENST00000291386 FAM25AB3EWG3 89 aa21.54■■□□□ 1.04
SSU72-201ENST00000291386 FAM25CB3EWG5 89 aa21.54■■□□□ 1.04
SSU72-201ENST00000291386 FAM25GB3EWG6 89 aa21.54■■□□□ 1.04
SSU72-201ENST00000291386 SNRNP70P08621 437 aaKnown RBP21.54■■□□□ 1.04
SSU72-201ENST00000291386 CD24P25063 80 aa21.54■■□□□ 1.04
SSU72-201ENST00000291386 CD1BP29016 333 aa21.54■■□□□ 1.04
SSU72-201ENST00000291386 PRSS3P35030 304 aa21.54■■□□□ 1.04
SSU72-201ENST00000291386 MOB3BQ86TA1 216 aa21.54■■□□□ 1.04
SSU72-201ENST00000291386 TMEM219Q86XT9 240 aa21.54■■□□□ 1.04
SSU72-201ENST00000291386 H1FOOQ8IZA3 346 aaPredicted RBP21.54■■□□□ 1.04
SSU72-201ENST00000291386 GVQW1Q8N7I0 195 aa21.54■■□□□ 1.04
SSU72-201ENST00000291386 CAPSLQ8WWF8 208 aa21.54■■□□□ 1.04
SSU72-201ENST00000291386 TAF15Q92804 592 aaKnown RBP eCLIP21.54■■□□□ 1.04
SSU72-201ENST00000291386 RBM14Q96PK6 669 aaKnown RBP21.54■■□□□ 1.04
SSU72-201ENST00000291386 MIXL1Q9H2W2 232 aa21.54■■□□□ 1.04
SSU72-201ENST00000291386 C16orf95Q9H693 158 aa21.54■■□□□ 1.04
SSU72-201ENST00000291386 ADAM30Q9UKF2 790 aa21.54■■□□□ 1.04
SSU72-201ENST00000291386 OR2F2O95006 317 aa21.53■■□□□ 1.04
SSU72-201ENST00000291386 AWAT1Q58HT5 328 aa21.53■■□□□ 1.04
SSU72-201ENST00000291386 S1PR3Q99500 378 aa21.53■■□□□ 1.04
SSU72-201ENST00000291386 GINS4Q9BRT9 223 aa21.53■■□□□ 1.04
SSU72-201ENST00000291386 NPFFR1Q9GZQ6 430 aa21.53■■□□□ 1.04
SSU72-201ENST00000291386 GAB2Q9UQC2 676 aa21.53■■□□□ 1.04
SSU72-201ENST00000291386 CTDSP2O14595 271 aa21.52■■□□□ 1.04
SSU72-201ENST00000291386 OR3A3P47888 321 aa21.52■■□□□ 1.04
SSU72-201ENST00000291386 FBLN7Q53RD9 439 aa21.52■■□□□ 1.04
SSU72-201ENST00000291386 ABHD14BQ96IU4 210 aa21.52■■□□□ 1.04
SSU72-201ENST00000291386 AKR1E2Q96JD6 320 aa21.52■■□□□ 1.04
SSU72-201ENST00000291386 NXF2Q9GZY0 626 aaKnown RBP21.52■■□□□ 1.04
SSU72-201ENST00000291386 SCPEP1Q9HB40 452 aa21.52■■□□□ 1.04
SSU72-201ENST00000291386 GPX8Q8TED1 209 aa21.51■■□□□ 1.03
SSU72-201ENST00000291386 NABP2Q9BQ15 211 aa21.51■■□□□ 1.03
SSU72-201ENST00000291386 SLC25A33Q9BSK2 321 aa21.51■■□□□ 1.03
SSU72-201ENST00000291386 BEX1Q9HBH7 125 aa21.51■■□□□ 1.03
SSU72-201ENST00000291386 EXTL2Q9UBQ6 330 aa21.51■■□□□ 1.03
SSU72-201ENST00000291386 MRPS7Q9Y2R9 242 aaKnown RBP21.51■■□□□ 1.03
SSU72-201ENST00000291386 CLPSL1A2RUU4 121 aa21.5■■□□□ 1.03
SSU72-201ENST00000291386 SULT1C2O00338 296 aa21.5■■□□□ 1.03
SSU72-201ENST00000291386 IGKV1D-33P01593 117 aa21.5■■□□□ 1.03
SSU72-201ENST00000291386 IGKV1-33P01594 117 aa21.5■■□□□ 1.03
SSU72-201ENST00000291386 NAT1P18440 290 aa21.5■■□□□ 1.03
SSU72-201ENST00000291386 LSAMPQ13449 338 aa21.5■■□□□ 1.03
SSU72-201ENST00000291386 C12orf54Q6X4T0 127 aa21.5■■□□□ 1.03
SSU72-201ENST00000291386 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.5■■□□□ 1.03
SSU72-201ENST00000291386 LINC01006Q8NI28 216 aa21.5■■□□□ 1.03
SSU72-201ENST00000291386 SNAPC3Q92966 411 aa21.5■■□□□ 1.03
SSU72-201ENST00000291386 NDUFA13Q9P0J0 144 aa21.5■■□□□ 1.03
SSU72-201ENST00000291386 RGS5O15539 181 aa21.49■■□□□ 1.03
SSU72-201ENST00000291386 MDKP21741 143 aaPredicted RBP21.49■■□□□ 1.03
SSU72-201ENST00000291386 RPL39P5Q59GN2 51 aa21.49■■□□□ 1.03
SSU72-201ENST00000291386 LAX1Q8IWV1 398 aa21.49■■□□□ 1.03
SSU72-201ENST00000291386 Q8N6K4 173 aa21.49■■□□□ 1.03
SSU72-201ENST00000291386 OR4C13Q8NGP0 309 aa21.49■■□□□ 1.03
SSU72-201ENST00000291386 OR2T10Q8NGZ9 312 aa21.49■■□□□ 1.03
SSU72-201ENST00000291386 C15orf40Q8WUR7 153 aa21.49■■□□□ 1.03
SSU72-201ENST00000291386 MRPL20Q9BYC9 149 aaKnown RBP21.49■■□□□ 1.03
SSU72-201ENST00000291386 IFT46Q9NQC8 304 aa21.49■■□□□ 1.03
SSU72-201ENST00000291386 ZNF221Q9UK13 617 aa21.49■■□□□ 1.03
SSU72-201ENST00000291386 IGHV3-72A0A0B4J1Y9 119 aa21.48■■□□□ 1.03
SSU72-201ENST00000291386 M0QZK8 103 aa21.48■■□□□ 1.03
SSU72-201ENST00000291386 PROP1O75360 226 aa21.48■■□□□ 1.03
SSU72-201ENST00000291386 TMEM11P17152 192 aa21.48■■□□□ 1.03
SSU72-201ENST00000291386 GPR12P47775 334 aa21.48■■□□□ 1.03
SSU72-201ENST00000291386 ARPC4P59998 168 aa21.48■■□□□ 1.03
SSU72-201ENST00000291386 HES1Q14469 280 aa21.48■■□□□ 1.03
SSU72-201ENST00000291386 Q8N2B8 174 aa21.48■■□□□ 1.03
SSU72-201ENST00000291386 OR5AP2Q8NGF4 316 aa21.48■■□□□ 1.03
SSU72-201ENST00000291386 EAF1Q96JC9 268 aaPredicted RBP21.48■■□□□ 1.03
SSU72-201ENST00000291386 RNF150Q9ULK6 438 aa21.48■■□□□ 1.03
SSU72-201ENST00000291386 OR2W1Q9Y3N9 320 aa21.48■■□□□ 1.03
SSU72-201ENST00000291386 MEIS3P1A6NDR6 274 aa21.47■■□□□ 1.03
SSU72-201ENST00000291386 TUSC2O75896 110 aa21.47■■□□□ 1.03
SSU72-201ENST00000291386 MOSP00540 346 aa21.47■■□□□ 1.03
SSU72-201ENST00000291386 OR8U9P0C7N5 309 aa21.47■■□□□ 1.03
SSU72-201ENST00000291386 CT45A6P0DMU7 189 aa21.47■■□□□ 1.03
SSU72-201ENST00000291386 CT45A5P0DMU8 189 aa21.47■■□□□ 1.03
SSU72-201ENST00000291386 CT45A7P0DMV0 189 aa21.47■■□□□ 1.03
SSU72-201ENST00000291386 SNX29P2Q8IUI4 249 aa21.47■■□□□ 1.03
SSU72-201ENST00000291386 OR8U1Q8NH10 309 aa21.47■■□□□ 1.03
SSU72-201ENST00000291386 NECAP2Q9NVZ3 263 aa21.47■■□□□ 1.03
SSU72-201ENST00000291386 RABL2AQ9UBK7 228 aaPredicted RBP21.47■■□□□ 1.03
SSU72-201ENST00000291386 RABL2BQ9UNT1 228 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms