RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 MZT1Q08AG7 82 aa16.1■□□□□ 0.17
BRAF-201ENST00000288602 ZNF816Q0VGE8 651 aaPredicted RBP16.1■□□□□ 0.17
BRAF-201ENST00000288602 IL34Q6ZMJ4 242 aa16.1■□□□□ 0.17
BRAF-201ENST00000288602 TMEM182Q6ZP80 229 aaPredicted RBP16.1■□□□□ 0.17
BRAF-201ENST00000288602 PARP11Q9NR21 331 aa16.1■□□□□ 0.17
BRAF-201ENST00000288602 F8W036 122 aa16.1■□□□□ 0.17
BRAF-201ENST00000288602 SEC11BP0C7V7 166 aa16.1■□□□□ 0.17
BRAF-201ENST00000288602 SELLP14151 372 aa16.1■□□□□ 0.17
BRAF-201ENST00000288602 CD40P25942 277 aa16.1■□□□□ 0.17
BRAF-201ENST00000288602 BLOC1S1P78537 153 aa16.1■□□□□ 0.17
BRAF-201ENST00000288602 TMEM267Q0VDI3 215 aaPredicted RBP16.1■□□□□ 0.17
BRAF-201ENST00000288602 SNRNP40Q96DI7 357 aaKnown RBP16.1■□□□□ 0.17
BRAF-201ENST00000288602 SSUH2Q9Y2M2 353 aa16.1■□□□□ 0.17
BRAF-201ENST00000288602 DSCAMO60469 2012 aa16.09■□□□□ 0.17
BRAF-201ENST00000288602 ST8SIA5O15466 376 aa16.09■□□□□ 0.17
BRAF-201ENST00000288602 ATG12O94817 140 aa16.09■□□□□ 0.17
BRAF-201ENST00000288602 PRH1P02810 166 aa16.09■□□□□ 0.17
BRAF-201ENST00000288602 FAM87AP0C7U9 286 aa16.09■□□□□ 0.17
BRAF-201ENST00000288602 DANCRP0C864 163 aa16.09■□□□□ 0.17
BRAF-201ENST00000288602 FGFRL1Q8N441 504 aa16.09■□□□□ 0.17
BRAF-201ENST00000288602 TSNAXQ99598 290 aaKnown RBP16.09■□□□□ 0.17
BRAF-201ENST00000288602 SLC25A31Q9H0C2 315 aa16.09■□□□□ 0.17
BRAF-201ENST00000288602 UQCC1Q9NVA1 299 aa16.09■□□□□ 0.17
BRAF-201ENST00000288602 ZZEF1O43149 2961 aa16.09■□□□□ 0.17
BRAF-201ENST00000288602 IGLV3-9A0A075B6K5 115 aa16.09■□□□□ 0.17
BRAF-201ENST00000288602 PCP4L1A6NKN8 68 aa16.09■□□□□ 0.17
BRAF-201ENST00000288602 WFDC8Q8IUA0 241 aa16.09■□□□□ 0.17
BRAF-201ENST00000288602 TGIF2LYQ8IUE0 185 aa16.09■□□□□ 0.17
BRAF-201ENST00000288602 C9JQL5 133 aa16.08■□□□□ 0.17
BRAF-201ENST00000288602 KRASP01116 189 aa16.08■□□□□ 0.17
BRAF-201ENST00000288602 CD80P33681 288 aa16.08■□□□□ 0.17
BRAF-201ENST00000288602 CAMLGP49069 296 aa16.08■□□□□ 0.17
BRAF-201ENST00000288602 F2RL1P55085 397 aa16.08■□□□□ 0.17
BRAF-201ENST00000288602 EDDM3BP56851 147 aa16.08■□□□□ 0.17
BRAF-201ENST00000288602 MIDNQ504T8 468 aa16.08■□□□□ 0.17
BRAF-201ENST00000288602 DUX4L9Q6RFH8 374 aaPredicted RBP16.08■□□□□ 0.17
BRAF-201ENST00000288602 CACFD1Q9UGQ2 172 aa16.08■□□□□ 0.17
BRAF-201ENST00000288602 PSG11Q9UQ72 335 aa16.08■□□□□ 0.17
BRAF-201ENST00000288602 C15orf65H3BRN8 121 aa16.08■□□□□ 0.16
BRAF-201ENST00000288602 WNT2P09544 360 aa16.08■□□□□ 0.16
BRAF-201ENST00000288602 ATP6V0CP27449 155 aa16.08■□□□□ 0.16
BRAF-201ENST00000288602 G6PCP35575 357 aa16.08■□□□□ 0.16
BRAF-201ENST00000288602 RUNX1Q01196 453 aa16.08■□□□□ 0.16
BRAF-201ENST00000288602 LSM10Q969L4 123 aaKnown RBP16.08■□□□□ 0.16
BRAF-201ENST00000288602 ABHD14AQ9BUJ0 271 aa16.08■□□□□ 0.16
BRAF-201ENST00000288602 C17orf98A8MV24 154 aa16.07■□□□□ 0.16
BRAF-201ENST00000288602 ATXN7O15265 892 aaPredicted RBP16.07■□□□□ 0.16
BRAF-201ENST00000288602 BRWD1-AS2P59051 145 aa16.07■□□□□ 0.16
BRAF-201ENST00000288602 PUSL1Q8N0Z8 303 aaKnown RBP16.07■□□□□ 0.16
BRAF-201ENST00000288602 LURAP1Q96LR2 239 aa16.07■□□□□ 0.16
BRAF-201ENST00000288602 NKX6-2Q9C056 277 aaPredicted RBP16.07■□□□□ 0.16
BRAF-201ENST00000288602 IGF2RP11717 2491 aa16.07■□□□□ 0.16
BRAF-201ENST00000288602 FAM74A7A6NL05 159 aa16.07■□□□□ 0.16
BRAF-201ENST00000288602 K7ENP7 123 aa16.07■□□□□ 0.16
BRAF-201ENST00000288602 CYB5R3P00387 301 aaPredicted RBP16.07■□□□□ 0.16
BRAF-201ENST00000288602 FAM74A3Q4VXF1 159 aa16.07■□□□□ 0.16
BRAF-201ENST00000288602 ZCCHC24Q8N2G6 241 aaKnown RBP16.07■□□□□ 0.16
BRAF-201ENST00000288602 DEFB108BQ8NET1 73 aa16.07■□□□□ 0.16
BRAF-201ENST00000288602 TCTEX1D2Q8WW35 142 aa16.07■□□□□ 0.16
BRAF-201ENST00000288602 NUDT19A8MXV4 375 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 RNASEK-C17orf49H0YIS7 233 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 IGHV1-46P01743 117 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 ZNF266Q14584 549 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 MRGPRGQ86SM5 289 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 OR10Z1Q8NGY1 313 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 OR2G3Q8NGZ4 309 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 GCM1Q9NP62 436 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 DCAF16Q9NXF7 216 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 ODAMA1E959 279 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 LINC00473A8K010 186 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 C16orf97H3BN30 126 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 TXNL1O43396 289 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 SYNGR2O43760 224 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 TSPAN15O95858 294 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 LHBP01229 141 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 SLC25A6P12236 298 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 C3orf36Q3SXR2 165 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 Q3ZCU0 254 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 UTF1Q5T230 341 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 FAM213BQ8TBF2 198 aa16.06■□□□□ 0.16
BRAF-201ENST00000288602 DOCK11Q5JSL3 2073 aa16.05■□□□□ 0.16
BRAF-201ENST00000288602 SPINT2O43291 252 aa16.05■□□□□ 0.16
BRAF-201ENST00000288602 NDUFA2O43678 99 aa16.05■□□□□ 0.16
BRAF-201ENST00000288602 S1PR2O95136 353 aa16.05■□□□□ 0.16
BRAF-201ENST00000288602 TNFAIP6P98066 277 aaPredicted RBP16.05■□□□□ 0.16
BRAF-201ENST00000288602 EIF4EBP1Q13541 118 aaPredicted RBP16.05■□□□□ 0.16
BRAF-201ENST00000288602 SPAG16Q8N0X2 631 aa16.05■□□□□ 0.16
BRAF-201ENST00000288602 KCNJ16Q9NPI9 418 aa16.05■□□□□ 0.16
BRAF-201ENST00000288602 C19orf12Q9NSK7 152 aa16.05■□□□□ 0.16
BRAF-201ENST00000288602 RNF212BA8MTL3 300 aa16.05■□□□□ 0.16
BRAF-201ENST00000288602 LYPD6BQ8NI32 183 aa16.05■□□□□ 0.16
BRAF-201ENST00000288602 AGMATQ9BSE5 352 aa16.05■□□□□ 0.16
BRAF-201ENST00000288602 DNASE2O00115 360 aaPredicted RBP16.04■□□□□ 0.16
BRAF-201ENST00000288602 CLDN1O95832 211 aa16.04■□□□□ 0.16
BRAF-201ENST00000288602 SFTA3P0C7M3 94 aa16.04■□□□□ 0.16
BRAF-201ENST00000288602 METTL15P1P0C7V9 234 aa16.04■□□□□ 0.16
BRAF-201ENST00000288602 MMP9P14780 707 aa16.04■□□□□ 0.16
BRAF-201ENST00000288602 CFHR2P36980 270 aa16.04■□□□□ 0.16
BRAF-201ENST00000288602 SELENOVP59797 346 aa16.04■□□□□ 0.16
BRAF-201ENST00000288602 RPL23AP62750 156 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms