RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 SEMA5BQ9P283 1151 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 RBPJLQ9UBG7 517 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 PILRAQ9UKJ1 303 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 KIAA1217Q5T5P2 1943 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 TMEM189A5PLL7 270 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 GDF9O60383 454 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 GGCTO75223 188 aaKnown RBP3.83□□□□□ -1.8
NCOA1-201ENST00000288599 GJB3O75712 270 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 VENTXO95231 258 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 F12P00748 615 aaPredicted RBP3.83□□□□□ -1.8
NCOA1-201ENST00000288599 MFAP2P55001 183 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 ZP1P60852 638 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 MRPL58Q14197 206 aaKnown RBP3.83□□□□□ -1.8
NCOA1-201ENST00000288599 RGNQ15493 299 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 PRSS54Q6PEW0 395 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 OR10AC1Q8NH08 325 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 ADAMTS17Q8TE56 1095 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 SPACA5Q96QH8 159 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 MMP26Q9NRE1 261 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 ZFP30Q9Y2G7 519 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 OARD1Q9Y530 152 aa3.83□□□□□ -1.8
NCOA1-201ENST00000288599 COL11A1P12107 1806 aaPredicted RBP3.82□□□□□ -1.8
NCOA1-201ENST00000288599 TMEM210A6NLX4 147 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 TMEM212A6NML5 194 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 SDHDO14521 159 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 ABLIM3O94929 683 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 LINC00158P58513 81 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 PSG6Q00889 435 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 TIAL1Q01085 375 aaKnown RBP eCLIP3.82□□□□□ -1.8
NCOA1-201ENST00000288599 CLLU1Q5K131 121 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 MZB1Q8WU39 189 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 FAM3DQ96BQ1 224 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 AUNIPQ9H7T9 357 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 FAM206AQ9NX38 181 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 IL19Q9UHD0 177 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 HSF4Q9ULV5 492 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 SMAD6O43541 496 aaKnown RBP3.82□□□□□ -1.8
NCOA1-201ENST00000288599 SELENOFO60613 162 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 DAOP14920 347 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 ALOX5APP20292 161 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 OTX1P32242 354 aaPredicted RBP3.82□□□□□ -1.8
NCOA1-201ENST00000288599 PRR20EP86478 221 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 PRR20CP86479 221 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 PRR20DP86480 221 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 PRR20BP86481 221 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 PRR20AP86496 221 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 MN1Q10571 1320 aaPredicted RBP3.82□□□□□ -1.8
NCOA1-201ENST00000288599 FNDC1Q4ZHG4 1894 aaPredicted RBP3.82□□□□□ -1.8
NCOA1-201ENST00000288599 TEX30Q5JUR7 227 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 DPPA3Q6W0C5 159 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 ST6GALNAC3Q8NDV1 305 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 CT55Q8WUE5 264 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 GHSRQ92847 366 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 ZNF503Q96F45 646 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 CHST5Q9GZS9 411 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 SMOC2Q9H3U7 446 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 RNF167Q9H6Y7 350 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 J3QR06 171 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 PRYO14603 147 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 HOXB4P17483 251 aaPredicted RBP3.82□□□□□ -1.8
NCOA1-201ENST00000288599 GABRG2P18507 467 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 C1orf140Q5VVS0 124 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 SLC23A3Q6PIS1 610 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 SLC25A34Q6PIV7 304 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 GLIPR1L1Q6UWM5 242 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 FAM24BQ8N5W8 94 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 C2CD4AQ8NCU7 369 aaPredicted RBP3.82□□□□□ -1.8
NCOA1-201ENST00000288599 OR5AN1Q8NGI8 311 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 GNPNAT1Q96EK6 184 aaPredicted RBP3.82□□□□□ -1.8
NCOA1-201ENST00000288599 SIGLEC12Q96PQ1 595 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 ZNF2Q9BSG1 426 aaPredicted RBP3.82□□□□□ -1.8
NCOA1-201ENST00000288599 SH2D2AQ9NP31 389 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 ELOVL5Q9NYP7 299 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 COLQQ9Y215 455 aaPredicted RBP3.82□□□□□ -1.8
NCOA1-201ENST00000288599 IGHV3-15A0A0B4J1V0 119 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 TRBV5-5A0A0J9YX44 114 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 M0R143 59 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 IGHV3-13P01766 116 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 IGHV3-7P01780 117 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 OR2T7P0C7T2 308 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 PSMB1P20618 241 aaKnown RBP3.82□□□□□ -1.8
NCOA1-201ENST00000288599 SLC6A1P30531 599 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 ADRA1AP35348 466 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 GALNT2Q10471 571 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 TMEM187Q14656 261 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 SS18Q15532 418 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 OR1Q1Q15612 314 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 TMEM249Q2WGJ8 235 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 DNLZQ5SXM8 178 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 FAM78BQ5VT40 261 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 TMEM251Q8N6I4 163 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 TCTEX1D1Q8N7M0 179 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 LFNGQ8NES3 379 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 EGLN2Q96KS0 407 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 RHOVQ96L33 236 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 ZBP1Q9H171 429 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 IFI27L2Q9H2X8 130 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 KLF12Q9Y4X4 402 aa3.82□□□□□ -1.8
NCOA1-201ENST00000288599 F11RQ9Y624 299 aaKnown RBP3.82□□□□□ -1.8
NCOA1-201ENST00000288599 NUMA1Q14980 2115 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms