RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ZNF616Q08AN1 781 aa14.97□□□□□ -0.01
CAPN1-201ENST00000279247 CCL13Q99616 98 aa14.97□□□□□ -0.01
CAPN1-201ENST00000279247 IGLV3-9A0A075B6K5 115 aa14.97□□□□□ -0.01
CAPN1-201ENST00000279247 ODAMA1E959 279 aa14.97□□□□□ -0.01
CAPN1-201ENST00000279247 IGKV1-5P01602 117 aa14.97□□□□□ -0.01
CAPN1-201ENST00000279247 ACAA1P09110 424 aaPredicted RBP14.97□□□□□ -0.01
CAPN1-201ENST00000279247 P2RY1P47900 373 aa14.97□□□□□ -0.01
CAPN1-201ENST00000279247 TMEM267Q0VDI3 215 aaPredicted RBP14.97□□□□□ -0.01
CAPN1-201ENST00000279247 HSD17B13Q7Z5P4 300 aaPredicted RBP14.97□□□□□ -0.01
CAPN1-201ENST00000279247 MARC2Q969Z3 335 aa14.97□□□□□ -0.01
CAPN1-201ENST00000279247 SPINT2O43291 252 aa14.96□□□□□ -0.01
CAPN1-201ENST00000279247 RBMXL2O75526 392 aaKnown RBP14.96□□□□□ -0.01
CAPN1-201ENST00000279247 PRH1P02810 166 aa14.96□□□□□ -0.01
CAPN1-201ENST00000279247 ZP3P21754 424 aa14.96□□□□□ -0.01
CAPN1-201ENST00000279247 RBPJQ06330 500 aa14.96□□□□□ -0.01
CAPN1-201ENST00000279247 C1orf174Q8IYL3 243 aa14.96□□□□□ -0.01
CAPN1-201ENST00000279247 PIGMQ9H3S5 423 aa14.96□□□□□ -0.01
CAPN1-201ENST00000279247 LPAR3Q9UBY5 353 aa14.96□□□□□ -0.01
CAPN1-201ENST00000279247 CFAP46Q8IYW2 2715 aa14.96□□□□□ -0.01
CAPN1-201ENST00000279247 IFNL4K9M1U5 179 aa14.96□□□□□ -0.01
CAPN1-201ENST00000279247 RPS16P62249 146 aaKnown RBP14.96□□□□□ -0.01
CAPN1-201ENST00000279247 FAM216BQ8N7L0 139 aa14.96□□□□□ -0.01
CAPN1-201ENST00000279247 OR5C1Q8NGR4 320 aa14.96□□□□□ -0.01
CAPN1-201ENST00000279247 PRR7Q8TB68 274 aa14.96□□□□□ -0.01
CAPN1-201ENST00000279247 LIN7CQ9NUP9 197 aaKnown RBP14.96□□□□□ -0.01
CAPN1-201ENST00000279247 BORCS7-ASMTA0A0B4J1R7 106 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 NPIPB11E5RHQ5 1161 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 NFYBP25208 207 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 EIF5AP63241 154 aaKnown RBP14.95□□□□□ -0.02
CAPN1-201ENST00000279247 SWI5Q1ZZU3 235 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 SPINK9Q5DT21 86 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 Q6ZRG5 221 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 FAM90A1Q86YD7 464 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 TMEM252Q8N6L7 170 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 TREM1Q9NP99 234 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 ZFP57Q9NU63 452 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 MED9Q9NWA0 146 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 C17orf98A8MV24 154 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 ERVFRD-1P60508 538 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 BTN1A1Q13410 526 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 SPAG16Q8N0X2 631 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 RNF7Q9UBF6 113 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 PTAFRP25105 342 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 GRNP28799 593 aaKnown RBP14.95□□□□□ -0.02
CAPN1-201ENST00000279247 ADIPOQQ15848 244 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 EIF5AL1Q6IS14 154 aaKnown RBP14.95□□□□□ -0.02
CAPN1-201ENST00000279247 ZNF645Q8N7E2 425 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 ARFGEF3Q5TH69 2177 aa14.95□□□□□ -0.02
CAPN1-201ENST00000279247 TACC2O95359 2948 aa14.94□□□□□ -0.02
CAPN1-201ENST00000279247 FGF16O43320 207 aa14.94□□□□□ -0.02
CAPN1-201ENST00000279247 TNFSF4P23510 183 aa14.94□□□□□ -0.02
CAPN1-201ENST00000279247 DYNLT3P51808 116 aa14.94□□□□□ -0.02
CAPN1-201ENST00000279247 TMEM182Q6ZP80 229 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-201ENST00000279247 LINC01560Q8TB33 94 aa14.94□□□□□ -0.02
CAPN1-201ENST00000279247 RALYQ9UKM9 306 aaKnown RBP14.94□□□□□ -0.02
CAPN1-201ENST00000279247 EPG5Q9HCE0 2579 aa14.94□□□□□ -0.02
CAPN1-201ENST00000279247 SHOXO15266 292 aa14.94□□□□□ -0.02
CAPN1-201ENST00000279247 S1PR2O95136 353 aa14.94□□□□□ -0.02
CAPN1-201ENST00000279247 RUNX1Q01196 453 aa14.94□□□□□ -0.02
CAPN1-201ENST00000279247 GPR157Q5UAW9 335 aa14.94□□□□□ -0.02
CAPN1-201ENST00000279247 SSX9Q7RTT3 188 aa14.94□□□□□ -0.02
CAPN1-201ENST00000279247 CCL17Q92583 94 aa14.94□□□□□ -0.02
CAPN1-201ENST00000279247 AKR1E2Q96JD6 320 aa14.94□□□□□ -0.02
CAPN1-201ENST00000279247 CLDN1O95832 211 aa14.93□□□□□ -0.02
CAPN1-201ENST00000279247 ID3Q02535 119 aa14.93□□□□□ -0.02
CAPN1-201ENST00000279247 ATRAIDQ6UW56 229 aa14.93□□□□□ -0.02
CAPN1-201ENST00000279247 IGSF10Q6WRI0 2623 aa14.93□□□□□ -0.02
CAPN1-201ENST00000279247 LINC00473A8K010 186 aa14.93□□□□□ -0.02
CAPN1-201ENST00000279247 KRBOX1C9JBD0 128 aa14.93□□□□□ -0.02
CAPN1-201ENST00000279247 MGST3O14880 152 aa14.93□□□□□ -0.02
CAPN1-201ENST00000279247 TMPRSS2O15393 492 aa14.93□□□□□ -0.02
CAPN1-201ENST00000279247 TXNL1O43396 289 aa14.93□□□□□ -0.02
CAPN1-201ENST00000279247 IRF2P14316 349 aa14.93□□□□□ -0.02
CAPN1-201ENST00000279247 PPP1R35Q8TAP8 253 aa14.93□□□□□ -0.02
CAPN1-201ENST00000279247 SNX22Q96L94 193 aa14.93□□□□□ -0.02
CAPN1-201ENST00000279247 ELOVL5Q9NYP7 299 aa14.93□□□□□ -0.02
CAPN1-201ENST00000279247 ZNF835Q9Y2P0 537 aa14.93□□□□□ -0.02
CAPN1-201ENST00000279247 UCNP55089 124 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 MST1LQ2TV78 715 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 RPL39P5Q59GN2 51 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 SUN5Q8TC36 379 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 FAM122AQ96E09 287 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 RAI1Q7Z5J4 1906 aaPredicted RBP14.92□□□□□ -0.02
CAPN1-201ENST00000279247 MED13LQ71F56 2210 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 C15orf65H3BRN8 121 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 F12P00748 615 aaPredicted RBP14.92□□□□□ -0.02
CAPN1-201ENST00000279247 METTL15P1P0C7V9 234 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 NDUFB7P17568 137 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 TAGLNQ01995 201 aaKnown RBP14.92□□□□□ -0.02
CAPN1-201ENST00000279247 TLE1Q04724 770 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 UBAC2Q8NBM4 344 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 LYRM2Q9NU23 88 aaPredicted RBP14.92□□□□□ -0.02
CAPN1-201ENST00000279247 HIVEP3Q5T1R4 2406 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 K7N7A8 449 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 GPR12P47775 334 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 SPANXN5Q5MJ07 72 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 SLC25A24Q6NUK1 477 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 OR10Z1Q8NGY1 313 aa14.92□□□□□ -0.02
CAPN1-201ENST00000279247 HCFC1P51610 2035 aa14.91□□□□□ -0.02
CAPN1-201ENST00000279247 CCL21O00585 134 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms