RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 NUDT16L1Q9BRJ7 211 aaKnown RBP11.89□□□□□ -0.51
NOTCH1-201ENST00000277541 R3HDMLQ9H3Y0 253 aa11.89□□□□□ -0.51
NOTCH1-201ENST00000277541 GSN-AS1Q9NRJ2 163 aa11.89□□□□□ -0.51
NOTCH1-201ENST00000277541 ABCA7Q8IZY2 2146 aa11.89□□□□□ -0.51
NOTCH1-201ENST00000277541 BHLHA9Q7RTU4 235 aa11.89□□□□□ -0.51
NOTCH1-201ENST00000277541 C10orf111Q8N326 155 aa11.89□□□□□ -0.51
NOTCH1-201ENST00000277541 GPBAR1Q8TDU6 330 aa11.89□□□□□ -0.51
NOTCH1-201ENST00000277541 MIEN1Q9BRT3 115 aa11.89□□□□□ -0.51
NOTCH1-201ENST00000277541 TMEM70Q9BUB7 260 aa11.89□□□□□ -0.51
NOTCH1-201ENST00000277541 NPVFQ9HCQ7 196 aa11.89□□□□□ -0.51
NOTCH1-201ENST00000277541 SHISA7A6NL88 538 aa11.89□□□□□ -0.51
NOTCH1-201ENST00000277541 ZNF502Q8TBZ5 544 aa11.89□□□□□ -0.51
NOTCH1-201ENST00000277541 A0A1W2PPC1 479 aa11.89□□□□□ -0.51
NOTCH1-201ENST00000277541 NTN1O95631 604 aa11.89□□□□□ -0.51
NOTCH1-201ENST00000277541 Q8WTZ3 238 aa11.89□□□□□ -0.51
NOTCH1-201ENST00000277541 CCL17Q92583 94 aa11.89□□□□□ -0.51
NOTCH1-201ENST00000277541 PSG6Q00889 435 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 RUNX1Q01196 453 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 SPANXN1Q5VSR9 72 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 TDHQ8IZJ6 230 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 OR10AG1Q8NH19 301 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 SIGLEC5O15389 551 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 SFTPA2Q8IWL1 248 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 SFTPA1Q8IWL2 248 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 TREM2Q9NZC2 230 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 KBTBD11O94819 623 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 RPS11P62280 158 aaKnown RBP eCLIP11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 RAB1BQ9H0U4 201 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 FOXJ2Q9P0K8 574 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 NPIPB9F8W1W9 429 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 PPIHO43447 177 aaKnown RBP11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 FAM222BQ8WU58 562 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 HOXD4P09016 255 aaPredicted RBP11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 KCNE5Q9UJ90 142 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 LYZL6O75951 148 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 HPRT1P00492 218 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 CFDP00746 253 aaPredicted RBP11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 CKS2P33552 79 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 HIKESHIQ53FT3 197 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 SFRP2Q96HF1 295 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 SBF1O95248 1867 aa11.88□□□□□ -0.51
NOTCH1-201ENST00000277541 J3QR06 171 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 THADAQ6YHU6 1953 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 BGLAPP02818 100 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 ISG15P05161 165 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 ZNF645Q8N7E2 425 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 AKIRIN1Q9H9L7 192 aaPredicted RBP11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 DOCK10Q96BY6 2186 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 OR10S1Q8NGN2 331 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 NPDC1Q9NQX5 325 aaPredicted RBP11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 GABRG2P18507 467 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 ARL14EPLP0DKL9 152 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 WDR25Q64LD2 544 aaPredicted RBP11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 RARRES2Q99969 163 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 LOC105371267A0A1B0GV96 52 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 C1QL1O75973 258 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 SIGLEC14Q08ET2 396 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 ACER2Q5QJU3 275 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 H7C2G1 150 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 CD8AP01732 235 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 WNT5AP41221 380 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 ZNF600Q6ZNG1 722 aa11.87□□□□□ -0.51
NOTCH1-201ENST00000277541 TRBV23-1A0A0A0MS06 115 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 TRBV5-5A0A0J9YX44 114 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 H0YL77 283 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 LMX1BO60663 402 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 MDKP21741 143 aaPredicted RBP11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 IZUMO4Q1ZYL8 232 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 TEX30Q5JUR7 227 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 CD200R1LQ6Q8B3 271 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 MUC15Q8N387 334 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 OR2I1PQ8NGU4 316 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 HIST1H2BAQ96A08 127 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 CDIPTO14735 213 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 FOXQ1Q9C009 403 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 CHRNA10Q9GZZ6 450 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 TMEM189A5PLL7 270 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 ZNF735P0CB33 412 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 KIR3DL2P43630 455 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 ADIPOQQ15848 244 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 CTGFP29279 349 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 NOTCH3Q9UM47 2321 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 OR2J1Q9GZK6 312 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 SMIM13P0DJ93 91 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 SH3BGRL3Q9H299 93 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 ZNF665Q9H7R5 613 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 COX7A1P24310 79 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 RBKSQ9H477 322 aa11.86□□□□□ -0.51
NOTCH1-201ENST00000277541 MNX1P50219 401 aaPredicted RBP11.85□□□□□ -0.51
NOTCH1-201ENST00000277541 OR11H4Q8NGC9 324 aa11.85□□□□□ -0.51
NOTCH1-201ENST00000277541 MEX3AA1L020 520 aaKnown RBP11.85□□□□□ -0.51
NOTCH1-201ENST00000277541 J3QT63 122 aa11.85□□□□□ -0.51
NOTCH1-201ENST00000277541 HYPMO75409 117 aa11.85□□□□□ -0.51
NOTCH1-201ENST00000277541 LIMS1P48059 325 aa11.85□□□□□ -0.51
NOTCH1-201ENST00000277541 TUSC5Q8IXB3 177 aa11.85□□□□□ -0.51
NOTCH1-201ENST00000277541 HDHD3Q9BSH5 251 aaPredicted RBP11.85□□□□□ -0.51
NOTCH1-201ENST00000277541 KLHDC2Q9Y2U9 406 aa11.85□□□□□ -0.51
NOTCH1-201ENST00000277541 FAM90A26D6RGX4 464 aa11.85□□□□□ -0.51
NOTCH1-201ENST00000277541 TNFSF14O43557 240 aa11.85□□□□□ -0.51
NOTCH1-201ENST00000277541 STAG3L3P0CL85 134 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms