RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 GZMMP51124 257 aa7.56□□□□□ -1.2
SCUBE3-201ENST00000274938 ZNF714Q96N38 554 aa7.56□□□□□ -1.2
SCUBE3-201ENST00000274938 OR2A7Q96R45 310 aa7.56□□□□□ -1.2
SCUBE3-201ENST00000274938 ARRDC1-AS1Q9H2J1 176 aa7.56□□□□□ -1.2
SCUBE3-201ENST00000274938 NPDC1Q9NQX5 325 aaPredicted RBP7.56□□□□□ -1.2
SCUBE3-201ENST00000274938 CCL27Q9Y4X3 112 aa7.56□□□□□ -1.2
SCUBE3-201ENST00000274938 ARID1BQ8NFD5 2236 aaPredicted RBP7.56□□□□□ -1.2
SCUBE3-201ENST00000274938 GCM2O75603 506 aaPredicted RBP7.56□□□□□ -1.2
SCUBE3-201ENST00000274938 CEACAM21Q3KPI0 293 aa7.56□□□□□ -1.2
SCUBE3-201ENST00000274938 NIT1Q86X76 327 aa7.56□□□□□ -1.2
SCUBE3-201ENST00000274938 PGLYRP4Q96LB8 373 aa7.56□□□□□ -1.2
SCUBE3-201ENST00000274938 METTL26Q96S19 204 aa7.56□□□□□ -1.2
SCUBE3-201ENST00000274938 CARHSP1Q9Y2V2 147 aaKnown RBP7.56□□□□□ -1.2
SCUBE3-201ENST00000274938 TMEM56-RWDD3S4R434 201 aa7.56□□□□□ -1.2
SCUBE3-201ENST00000274938 TRAV9-1A0A075B6T8 112 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 B4E171 279 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 CISD3P0C7P0 127 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 MYOGP15173 224 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 HTN1P15515 57 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 SLC35B1P78383 322 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 ZNF600Q6ZNG1 722 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 OR2Y1Q8NGV0 311 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 PRELID3AQ96N28 172 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 TNFSF14O43557 240 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 NXPH1P58417 271 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 MEIG1Q5JSS6 88 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 APCDD1LQ8NCL9 501 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 PLSCR2Q9NRY7 297 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 JKAMPQ9P055 326 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 C4AP0C0L4 1744 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 C4BP0C0L5 1744 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 CHD4Q14839 1912 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 SIGLEC5O15389 551 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 NGFRP08138 427 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 HIST1H1AQ02539 215 aaPredicted RBP7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 SIGLEC14Q08ET2 396 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 C1QL3Q5VWW1 255 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 GUSBP11Q6P575 273 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 AQP3Q92482 292 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 MRAP2Q96G30 205 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 FAM90A27PA6NNH2 459 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 CLDN14O95500 239 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 LOXL3P58215 753 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 COL10A1Q03692 680 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 FAM27BQ5VT28 67 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 SMIM8Q96KF7 97 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 SCN11AQ9UI33 1791 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 DPRXA6NFQ7 191 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 HYAL3O43820 417 aaPredicted RBP7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 HIKESHIQ53FT3 197 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 SELENOHQ8IZQ5 122 aaKnown RBP7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 SLC25A10Q9UBX3 287 aaPredicted RBP7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 AUP1Q9Y679 476 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 A0A1W2PQM1 296 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 C7orf71A4D174 169 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 HBBP68871 147 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 ECSCRQ19T08 205 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 OR4D5Q8NGN0 318 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 C16orf92Q96LL3 132 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 DNAJC4Q9NNZ3 241 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 SSC5DA1L4H1 1573 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 COL16A1Q07092 1604 aaPredicted RBP7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 MYH1P12882 1939 aa7.55□□□□□ -1.2
SCUBE3-201ENST00000274938 PPIAL4EA0A075B759 164 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 PPIAL4DF5H284 164 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 IFNL4K9M1U5 179 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 CDX4O14627 284 aaPredicted RBP7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 PPIAL4FP0DN26 164 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 LIMS2Q7Z4I7 341 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 KIR2DL4Q99706 377 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 PPIAL4AQ9Y536 164 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 HOXB1P14653 301 aaPredicted RBP7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 DLX6P56179 175 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 CTAG1AP78358 180 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 CD200R1LQ6Q8B3 271 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 UBTD1Q9HAC8 227 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 F11RQ9Y624 299 aaKnown RBP7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 A0A1B0GWB2 263 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 ISG15P05161 165 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 NANOS3P60323 173 aaKnown RBP7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 RPL8P62917 257 aaKnown RBP7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 CX3CL1P78423 397 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 IFITM2Q01629 132 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 FBXW9Q5XUX1 488 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 GPR146Q96CH1 333 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 ZNF414Q96IQ9 312 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 PRSS27Q9BQR3 290 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 A0A1B0GW15 77 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 PGLYRP1O75594 196 aaPredicted RBP7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 PPP1R17O96001 155 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 GAB4Q2WGN9 574 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 MIC13Q5XKP0 118 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 PHLDA3Q9Y5J5 127 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 LAMB4A4D0S4 1761 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 ZNF205O95201 554 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 IGFBP6P24592 240 aaPredicted RBP7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 C10orf111Q8N326 155 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 BEND2Q8NDZ0 799 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 GPR82Q96P67 336 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 ALKBH7Q9BT30 221 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms