RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 IZUMO4Q1ZYL8 232 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 KRTCAP3Q53RY4 240 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 TMEM252Q8N6L7 170 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 VN1R17PQ8TDU5 208 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 ADIPOR1Q96A54 375 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 GPX7Q96SL4 187 aaPredicted RBP9.89□□□□□ -0.83
USP53-201ENST00000274030 IL36RNQ9UBH0 155 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 ESPL1Q14674 2120 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 A0A087X0M5 115 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 A0A1B0GX30 115 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 TIAF1O95411 115 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 SRSF9Q13242 221 aaKnown RBP eCLIP9.89□□□□□ -0.83
USP53-201ENST00000274030 UNC119Q13432 240 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 SGMS2Q8NHU3 365 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 NPVFQ9HCQ7 196 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 METTL1Q9UBP6 276 aaKnown RBP9.89□□□□□ -0.83
USP53-201ENST00000274030 IGHV3-48P01763 117 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 HIST1H1BP16401 226 aaKnown RBP9.89□□□□□ -0.83
USP53-201ENST00000274030 PAFAH1B2P68402 229 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 CCDC144NLQ6NUI1 221 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 SLC25A47Q6Q0C1 308 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 EIF4E3Q8N5X7 224 aaKnown RBP9.89□□□□□ -0.83
USP53-201ENST00000274030 WNT2BQ93097 391 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 COL4A5P29400 1685 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 PRR33A8MZF0 331 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 NDUFB4O95168 129 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 HIST1H1EP10412 219 aaKnown RBP9.89□□□□□ -0.83
USP53-201ENST00000274030 GFRA1P56159 465 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 GBGT1Q8N5D6 347 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 SRXN1Q9BYN0 137 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 IGHV3OR16-12A0A075B7B8 117 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 HOXA4Q00056 320 aaPredicted RBP9.89□□□□□ -0.83
USP53-201ENST00000274030 P2RY6Q15077 328 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 NFAM1Q8NET5 270 aaPredicted RBP9.89□□□□□ -0.83
USP53-201ENST00000274030 ZNF552Q9H707 407 aaPredicted RBP9.89□□□□□ -0.83
USP53-201ENST00000274030 SIRT7Q9NRC8 400 aa9.89□□□□□ -0.83
USP53-201ENST00000274030 FGF5P12034 268 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 CD81P60033 236 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 ERVFRD-1P60508 538 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 CLEC2AQ6UVW9 174 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 PILRBQ9UKJ0 227 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 PITX3O75364 302 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 LINC00869P0C866 280 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 MIA3Q5JRA6 1907 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 MUC1P15941 1255 aaPredicted RBP9.88□□□□□ -0.83
USP53-201ENST00000274030 ZXDCQ2QGD7 858 aaPredicted RBP9.88□□□□□ -0.83
USP53-201ENST00000274030 LRRC75BQ2VPJ9 315 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 STXBP6Q8NFX7 210 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 PTX4Q96A99 478 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 TBX15Q96SF7 602 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 SF3B6Q9Y3B4 125 aaKnown RBP9.88□□□□□ -0.83
USP53-201ENST00000274030 B4DEV8 164 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 H3BTX0 84 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 SLC25A17O43808 307 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 CIDEAO60543 219 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 GAPDHP04406 335 aaKnown RBP9.88□□□□□ -0.83
USP53-201ENST00000274030 REG1AP05451 166 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 ZNF735P0CB33 412 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 IGHV3-35A0A0C4DH35 117 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 TRBV5-5A0A0J9YX44 114 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 OR4C46A6NHA9 309 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 DHRS7CA6NNS2 312 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 ADAM11O75078 769 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 NPBWR2P48146 333 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 ARF6P62330 175 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 TWIST1Q15672 202 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 GUCA2BQ16661 112 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 VKORC1L1Q8N0U8 176 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 OR4A5Q8NH83 315 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 SGK494Q96LW2 274 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 IL19Q9UHD0 177 aa9.88□□□□□ -0.83
USP53-201ENST00000274030 AHRRA9YTQ3 701 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 C9orf172C9J069 976 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 SUCLG1P53597 346 aaKnown RBP9.87□□□□□ -0.83
USP53-201ENST00000274030 VAX1Q5SQQ9 334 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 MIC13Q5XKP0 118 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 SLC25A38Q96DW6 304 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 MARS2Q96GW9 593 aaKnown RBP9.87□□□□□ -0.83
USP53-201ENST00000274030 GHITMQ9H3K2 345 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 RBKSQ9H477 322 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 DLL3Q9NYJ7 618 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 IGHV3OR16-10A0A075B7F0 116 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 ISLRO14498 428 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 PIN1P1O15428 100 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 OR2A4O95047 310 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 FSTP19883 344 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 KLK2P20151 261 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 FGFRL1Q8N441 504 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 OR2A7Q96R45 310 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 C7orf66A4D0T2 115 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 ACAA1P09110 424 aaPredicted RBP9.87□□□□□ -0.83
USP53-201ENST00000274030 COX6A1P12074 109 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 P2RY4P51582 365 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 DLX1P56177 255 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 FAM3BP58499 235 aaPredicted RBP9.87□□□□□ -0.83
USP53-201ENST00000274030 SSX8Q7RTT4 187 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 STPG2Q8N412 459 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 ZNF383Q8NA42 475 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 CBY1Q9Y3M2 126 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 BCL2P10415 239 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms