RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 GALR2O43603 387 aaPredicted RBP23.24■■□□□ 1.31
CBX4-201ENST00000269397 FAM53AQ6NSI3 398 aaPredicted RBP23.24■■□□□ 1.31
CBX4-201ENST00000269397 FGFRL1Q8N441 504 aa23.24■■□□□ 1.31
CBX4-201ENST00000269397 PINX1Q96BK5 328 aaKnown RBP23.24■■□□□ 1.31
CBX4-201ENST00000269397 UBE2ZQ9H832 354 aaPredicted RBP23.24■■□□□ 1.31
CBX4-201ENST00000269397 TRBV6-6A0A0A6YYG2 114 aa23.24■■□□□ 1.31
CBX4-201ENST00000269397 KBTBD11O94819 623 aa23.24■■□□□ 1.31
CBX4-201ENST00000269397 CYB561P49447 251 aa23.24■■□□□ 1.31
CBX4-201ENST00000269397 ZNF664Q8N3J9 261 aa23.24■■□□□ 1.31
CBX4-201ENST00000269397 OR4F5Q8NH21 305 aa23.24■■□□□ 1.31
CBX4-201ENST00000269397 TMEM45BQ96B21 275 aa23.24■■□□□ 1.31
CBX4-201ENST00000269397 POM121L2Q96KW2 1035 aa23.24■■□□□ 1.31
CBX4-201ENST00000269397 OR4F4Q96R69 305 aa23.24■■□□□ 1.31
CBX4-201ENST00000269397 PPP5D1E7EU14 171 aa23.23■■□□□ 1.31
CBX4-201ENST00000269397 DNLZQ5SXM8 178 aa23.23■■□□□ 1.31
CBX4-201ENST00000269397 ZNF573Q86YE8 665 aa23.23■■□□□ 1.31
CBX4-201ENST00000269397 CEACAM6P40199 344 aa23.23■■□□□ 1.31
CBX4-201ENST00000269397 SSTP61278 116 aa23.23■■□□□ 1.31
CBX4-201ENST00000269397 DRAM1Q8N682 238 aa23.23■■□□□ 1.31
CBX4-201ENST00000269397 HES7Q9BYE0 225 aa23.23■■□□□ 1.31
CBX4-201ENST00000269397 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP23.22■■□□□ 1.31
CBX4-201ENST00000269397 RAMP3O60896 148 aa23.22■■□□□ 1.31
CBX4-201ENST00000269397 KRASP01116 189 aa23.22■■□□□ 1.31
CBX4-201ENST00000269397 IFNA10P01566 189 aa23.22■■□□□ 1.31
CBX4-201ENST00000269397 GNG3P63215 75 aa23.22■■□□□ 1.31
CBX4-201ENST00000269397 PMP22Q01453 160 aa23.22■■□□□ 1.31
CBX4-201ENST00000269397 CLN8Q9UBY8 286 aa23.22■■□□□ 1.31
CBX4-201ENST00000269397 SLC31A2O15432 143 aa23.22■■□□□ 1.31
CBX4-201ENST00000269397 WNT5AP41221 380 aa23.22■■□□□ 1.31
CBX4-201ENST00000269397 IDH3GP51553 393 aaPredicted RBP23.22■■□□□ 1.31
CBX4-201ENST00000269397 OR5B12Q96R08 314 aa23.22■■□□□ 1.31
CBX4-201ENST00000269397 LIN7CQ9NUP9 197 aaKnown RBP23.22■■□□□ 1.31
CBX4-201ENST00000269397 FUT9Q9Y231 359 aa23.22■■□□□ 1.31
CBX4-201ENST00000269397 MUC3AQ02505 3323 aa23.21■■□□□ 1.31
CBX4-201ENST00000269397 PATE3B3GLJ2 98 aa23.21■■□□□ 1.31
CBX4-201ENST00000269397 BMP5P22003 454 aa23.21■■□□□ 1.31
CBX4-201ENST00000269397 PSMB3P49720 205 aa23.21■■□□□ 1.31
CBX4-201ENST00000269397 NRN1LQ496H8 165 aa23.21■■□□□ 1.31
CBX4-201ENST00000269397 Q6P435 159 aa23.21■■□□□ 1.31
CBX4-201ENST00000269397 WFIKKN1Q96NZ8 548 aa23.21■■□□□ 1.31
CBX4-201ENST00000269397 DVL1O14640 695 aa23.21■■□□□ 1.31
CBX4-201ENST00000269397 SELLP14151 372 aa23.21■■□□□ 1.31
CBX4-201ENST00000269397 SS18L1O75177 396 aaPredicted RBP23.2■■□□□ 1.3
CBX4-201ENST00000269397 FGF7P21781 194 aa23.2■■□□□ 1.3
CBX4-201ENST00000269397 G6PCP35575 357 aa23.2■■□□□ 1.3
CBX4-201ENST00000269397 USF2Q15853 346 aaPredicted RBP23.2■■□□□ 1.3
CBX4-201ENST00000269397 C3AR1Q16581 482 aa23.2■■□□□ 1.3
CBX4-201ENST00000269397 AURKAIP1Q9NWT8 199 aaPredicted RBP23.2■■□□□ 1.3
CBX4-201ENST00000269397 IFNL4K9M1U5 179 aa23.2■■□□□ 1.3
CBX4-201ENST00000269397 LINC00596Q86U02 117 aa23.2■■□□□ 1.3
CBX4-201ENST00000269397 PYGO2Q9BRQ0 406 aa23.2■■□□□ 1.3
CBX4-201ENST00000269397 FAM166BA8MTA8 275 aa23.19■■□□□ 1.3
CBX4-201ENST00000269397 OR2H2O95918 312 aa23.19■■□□□ 1.3
CBX4-201ENST00000269397 ZNF816Q0VGE8 651 aaPredicted RBP23.19■■□□□ 1.3
CBX4-201ENST00000269397 SPINK9Q5DT21 86 aa23.19■■□□□ 1.3
CBX4-201ENST00000269397 AGMATQ9BSE5 352 aa23.19■■□□□ 1.3
CBX4-201ENST00000269397 A8MWP6 167 aa23.19■■□□□ 1.3
CBX4-201ENST00000269397 TNFRSF9Q07011 255 aa23.19■■□□□ 1.3
CBX4-201ENST00000269397 OR10G9Q8NGN4 311 aa23.19■■□□□ 1.3
CBX4-201ENST00000269397 OR10G7Q8NGN6 311 aa23.19■■□□□ 1.3
CBX4-201ENST00000269397 IGKV3D-15A0A087WSY6 115 aa23.18■■□□□ 1.3
CBX4-201ENST00000269397 SELEP16581 610 aa23.18■■□□□ 1.3
CBX4-201ENST00000269397 TFF3Q07654 80 aa23.18■■□□□ 1.3
CBX4-201ENST00000269397 ACSF3Q4G176 576 aaPredicted RBP23.18■■□□□ 1.3
CBX4-201ENST00000269397 TMEM14EPQ6UXP3 125 aa23.18■■□□□ 1.3
CBX4-201ENST00000269397 OR51I2Q9H344 312 aa23.18■■□□□ 1.3
CBX4-201ENST00000269397 LHX2P50458 406 aa23.18■■□□□ 1.3
CBX4-201ENST00000269397 PLP2Q04941 152 aa23.18■■□□□ 1.3
CBX4-201ENST00000269397 ZNF808Q8N4W9 903 aaPredicted RBP23.18■■□□□ 1.3
CBX4-201ENST00000269397 LINC00470Q9BZP3 86 aa23.18■■□□□ 1.3
CBX4-201ENST00000269397 NUBP1P53384 320 aa23.17■■□□□ 1.3
CBX4-201ENST00000269397 TAS2R60P59551 318 aa23.17■■□□□ 1.3
CBX4-201ENST00000269397 GNB2P62879 340 aa23.17■■□□□ 1.3
CBX4-201ENST00000269397 PILRBQ9UKJ0 227 aa23.17■■□□□ 1.3
CBX4-201ENST00000269397 PAGE4O60829 102 aa23.17■■□□□ 1.3
CBX4-201ENST00000269397 EGR1P18146 543 aa23.17■■□□□ 1.3
CBX4-201ENST00000269397 CEBPDP49716 269 aaPredicted RBP23.17■■□□□ 1.3
CBX4-201ENST00000269397 HOXA4Q00056 320 aaPredicted RBP23.17■■□□□ 1.3
CBX4-201ENST00000269397 FFAR4Q5NUL3 377 aa23.17■■□□□ 1.3
CBX4-201ENST00000269397 RNASEH2CQ8TDP1 164 aaKnown RBP23.17■■□□□ 1.3
CBX4-201ENST00000269397 ZDHHC16Q969W1 377 aa23.17■■□□□ 1.3
CBX4-201ENST00000269397 PIGBOS1A0A0B4J2F0 54 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 OR5B21A6NL26 309 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 HLA-CQ95604 372 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 LRP5LA4QPB2 252 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 C1QTNF9BB2RNN3 333 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 IL18BPO95998 194 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 HRASP01112 189 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 GYPAP02724 150 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 CHRNA7P36544 502 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 CLDN18P56856 261 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 PMS2P11Q13670 270 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 ZNF497Q6ZNH5 498 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 WDR86Q86TI4 376 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 APH1AQ96BI3 265 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 C12orf49Q9H741 205 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 MKRN2OSH3BPM6 223 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 NTN3O00634 580 aaPredicted RBP23.16■■□□□ 1.3
CBX4-201ENST00000269397 PAX1P15863 534 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 FAM3BP58499 235 aaPredicted RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms