RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 OR8B3Q8NGG8 313 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 NEIL1Q96FI4 390 aaPredicted RBP11.63□□□□□ -0.55
SS18-201ENST00000269137 OR8B2Q96RD0 313 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 PDCD10Q9BUL8 212 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 NMES1Q9C002 83 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 METTL8Q9H825 291 aaKnown RBP11.63□□□□□ -0.55
SS18-201ENST00000269137 RNF150Q9ULK6 438 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 PIGBOS1A0A0B4J2F0 54 aa11.62□□□□□ -0.55
SS18-201ENST00000269137 C5orf51A6NDU8 294 aa11.62□□□□□ -0.55
SS18-201ENST00000269137 RNF212BA8MTL3 300 aa11.62□□□□□ -0.55
SS18-201ENST00000269137 FAM25EA8MYX2 175 aa11.62□□□□□ -0.55
SS18-201ENST00000269137 TNFSF12O43508 249 aa11.62□□□□□ -0.55
SS18-201ENST00000269137 CDS2O95674 445 aa11.62□□□□□ -0.55
SS18-201ENST00000269137 HOXB5P09067 269 aa11.62□□□□□ -0.55
SS18-201ENST00000269137 RAB7AP51149 207 aa11.62□□□□□ -0.55
SS18-201ENST00000269137 IL22RA2Q969J5 263 aa11.62□□□□□ -0.55
SS18-201ENST00000269137 SEC22AQ96IW7 307 aa11.62□□□□□ -0.55
SS18-201ENST00000269137 GPHA2Q96T91 129 aa11.62□□□□□ -0.55
SS18-201ENST00000269137 PSG11Q9UQ72 335 aa11.62□□□□□ -0.55
SS18-201ENST00000269137 ARID1AO14497 2285 aa11.61□□□□□ -0.55
SS18-201ENST00000269137 C13orf42A0A1B0GVH6 325 aa11.61□□□□□ -0.55
SS18-201ENST00000269137 ST8SIA5O15466 376 aa11.61□□□□□ -0.55
SS18-201ENST00000269137 IFNA21P01568 189 aa11.61□□□□□ -0.55
SS18-201ENST00000269137 GPR6P46095 362 aaPredicted RBP11.61□□□□□ -0.55
SS18-201ENST00000269137 ZNF134P52741 427 aa11.61□□□□□ -0.55
SS18-201ENST00000269137 DLX6P56179 175 aa11.61□□□□□ -0.55
SS18-201ENST00000269137 FGL1Q08830 312 aa11.61□□□□□ -0.55
SS18-201ENST00000269137 WDR25Q64LD2 544 aaPredicted RBP11.61□□□□□ -0.55
SS18-201ENST00000269137 ZNF767PQ75MW2 155 aa11.61□□□□□ -0.55
SS18-201ENST00000269137 LHFPL5Q8TAF8 219 aa11.61□□□□□ -0.55
SS18-201ENST00000269137 C8orf46Q8TAG6 207 aa11.61□□□□□ -0.55
SS18-201ENST00000269137 C5orf30Q96GV9 206 aa11.61□□□□□ -0.55
SS18-201ENST00000269137 C2orf50Q96LR7 162 aa11.61□□□□□ -0.55
SS18-201ENST00000269137 PATZ1Q9HBE1 687 aaKnown RBP11.61□□□□□ -0.55
SS18-201ENST00000269137 GAB2Q9UQC2 676 aa11.61□□□□□ -0.55
SS18-201ENST00000269137 DUXBA0A1W2PPF3 345 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 F5H0A9 414 aaPredicted RBP11.6□□□□□ -0.55
SS18-201ENST00000269137 MMP23AO75900 390 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 Q3ZCU0 254 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 PRAMEF5Q5TYX0 476 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 GGNBP1Q5YKI7 109 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 ZNF66Q6ZN08 573 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 ZNF439Q8NDP4 499 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 OR51H1Q8NH63 302 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 ABHD14BQ96IU4 210 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 OR10C1Q96KK4 312 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 CCL19Q99731 98 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 ABHD14AQ9BUJ0 271 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 IFI27L2Q9H2X8 130 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 LIN7CQ9NUP9 197 aaKnown RBP11.6□□□□□ -0.55
SS18-201ENST00000269137 SDHAF2Q9NX18 166 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 TMED3Q9Y3Q3 217 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 MPTX1A8MV57 137 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 SNAPC5O75971 98 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 PLA2G2AP14555 144 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 CCL3L1P16619 93 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 NFYBP25208 207 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 GPR12P47775 334 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 IL15RAQ13261 267 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 LGALSLQ3ZCW2 172 aaPredicted RBP11.6□□□□□ -0.55
SS18-201ENST00000269137 CT45A1Q5HYN5 189 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 TMEM268Q5VZI3 342 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 LYZL2Q7Z4W2 148 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 ZNF695Q8IW36 515 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 SELENOHQ8IZQ5 122 aaKnown RBP11.6□□□□□ -0.55
SS18-201ENST00000269137 TCTEX1D1Q8N7M0 179 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 CT45A3Q8NHU0 189 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 PPP1R1CQ8WVI7 109 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 RAB39BQ96DA2 213 aa11.6□□□□□ -0.55
SS18-201ENST00000269137 HSD17B10Q99714 261 aaKnown RBP11.6□□□□□ -0.55
SS18-201ENST00000269137 FAM212BQ9NTI7 297 aaPredicted RBP11.6□□□□□ -0.55
SS18-201ENST00000269137 TACC2O95359 2948 aa11.59□□□□□ -0.55
SS18-201ENST00000269137 A1L4Q6 167 aa11.59□□□□□ -0.55
SS18-201ENST00000269137 SERPINE2P07093 398 aa11.59□□□□□ -0.55
SS18-201ENST00000269137 UTF1Q5T230 341 aa11.59□□□□□ -0.55
SS18-201ENST00000269137 SLC35G3Q8N808 338 aa11.59□□□□□ -0.55
SS18-201ENST00000269137 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.59□□□□□ -0.55
SS18-201ENST00000269137 RBPMSQ93062 196 aaKnown RBP11.59□□□□□ -0.55
SS18-201ENST00000269137 COMMD9Q9P000 198 aa11.59□□□□□ -0.55
SS18-201ENST00000269137 TRAV14DV4A0A0A6YYC5 116 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 A0A1W2PPH5 198 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 HMSDA8MTL9 139 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 C17orf98A8MV24 154 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 J3QKU1 62 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 SLC31A2O15432 143 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 IGHV4-39P01824 125 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 HTR2BP41595 481 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 CATR1Q13166 79 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 IAH1Q2TAA2 248 aaPredicted RBP11.58□□□□□ -0.56
SS18-201ENST00000269137 SLC25A48Q6ZT89 311 aaKnown RBP11.58□□□□□ -0.56
SS18-201ENST00000269137 ZNF295-AS1Q8N0V1 137 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 C8orf31Q8N9H6 132 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 LY6G5BQ8NDX9 201 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 LEAP2Q969E1 77 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 A0A087X0M5 115 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 A0A1B0GX30 115 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 TSC22D2O75157 780 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 PROP1O75360 226 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 RBP4P02753 201 aa11.58□□□□□ -0.56
SS18-201ENST00000269137 SLC25A4P12235 298 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms