RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 TUSC5Q8IXB3 177 aa14.73□□□□□ -0.05
SRF-201ENST00000265354 H1FOOQ8IZA3 346 aaPredicted RBP14.73□□□□□ -0.05
SRF-201ENST00000265354 HSPB9Q9BQS6 159 aa14.73□□□□□ -0.05
SRF-201ENST00000265354 OR2W1Q9Y3N9 320 aa14.73□□□□□ -0.05
SRF-201ENST00000265354 GPR12P47775 334 aa14.73□□□□□ -0.05
SRF-201ENST00000265354 RTL8AQ9BWD3 113 aa14.73□□□□□ -0.05
SRF-201ENST00000265354 TUBD1Q9UJT1 453 aa14.73□□□□□ -0.05
SRF-201ENST00000265354 DUXBA0A1W2PPF3 345 aa14.72□□□□□ -0.05
SRF-201ENST00000265354 SPINT2O43291 252 aa14.72□□□□□ -0.05
SRF-201ENST00000265354 IGHV2-70P01814 119 aa14.72□□□□□ -0.05
SRF-201ENST00000265354 SELEP16581 610 aa14.72□□□□□ -0.05
SRF-201ENST00000265354 LYZL4Q96KX0 146 aa14.72□□□□□ -0.05
SRF-201ENST00000265354 ASCL3Q9NQ33 180 aa14.72□□□□□ -0.05
SRF-201ENST00000265354 TMEM38BQ9NVV0 291 aa14.72□□□□□ -0.05
SRF-201ENST00000265354 PRRC2CQ9Y520 2896 aaKnown RBP14.72□□□□□ -0.05
SRF-201ENST00000265354 KIAA1644Q3SXP7 199 aa14.72□□□□□ -0.05
SRF-201ENST00000265354 FAM27BQ5VT28 67 aa14.72□□□□□ -0.05
SRF-201ENST00000265354 FAM173AQ9BQD7 235 aa14.72□□□□□ -0.05
SRF-201ENST00000265354 OR1A1Q9P1Q5 309 aa14.72□□□□□ -0.05
SRF-201ENST00000265354 B4DEV8 164 aa14.72□□□□□ -0.05
SRF-201ENST00000265354 C5orf67F2Z3F1 127 aa14.72□□□□□ -0.05
SRF-201ENST00000265354 PGLYRP1O75594 196 aaPredicted RBP14.72□□□□□ -0.05
SRF-201ENST00000265354 IER3P46695 156 aa14.72□□□□□ -0.05
SRF-201ENST00000265354 CPEB3Q8NE35 698 aaKnown RBP14.72□□□□□ -0.05
SRF-201ENST00000265354 ZNF331Q9NQX6 463 aaPredicted RBP14.72□□□□□ -0.05
SRF-201ENST00000265354 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.72□□□□□ -0.05
SRF-201ENST00000265354 HS3ST3B1Q9Y662 390 aa14.72□□□□□ -0.05
SRF-201ENST00000265354 RPL36A-HNRNPH2H7BZ11 118 aa14.71□□□□□ -0.05
SRF-201ENST00000265354 IGHEP01854 428 aa14.71□□□□□ -0.05
SRF-201ENST00000265354 COL10A1Q03692 680 aa14.71□□□□□ -0.05
SRF-201ENST00000265354 TIGITQ495A1 244 aa14.71□□□□□ -0.05
SRF-201ENST00000265354 TRAV38-1A0A0B4J264 116 aa14.71□□□□□ -0.05
SRF-201ENST00000265354 EREGO14944 169 aa14.71□□□□□ -0.05
SRF-201ENST00000265354 RELQ04864 619 aaPredicted RBP14.71□□□□□ -0.05
SRF-201ENST00000265354 SCGB2A2Q13296 93 aa14.71□□□□□ -0.05
SRF-201ENST00000265354 DCAF12Q5T6F0 453 aa14.71□□□□□ -0.05
SRF-201ENST00000265354 SLC25A45Q8N413 288 aa14.71□□□□□ -0.05
SRF-201ENST00000265354 RNF166Q96A37 237 aaPredicted RBP14.71□□□□□ -0.05
SRF-201ENST00000265354 MUCL1Q96DR8 90 aa14.71□□□□□ -0.05
SRF-201ENST00000265354 RCC1LQ96I51 464 aaKnown RBP14.71□□□□□ -0.05
SRF-201ENST00000265354 M0R1X1 148 aa14.71□□□□□ -0.05
SRF-201ENST00000265354 MPLP40238 635 aa14.71□□□□□ -0.05
SRF-201ENST00000265354 MRPL54Q6P161 138 aaKnown RBP14.71□□□□□ -0.05
SRF-201ENST00000265354 SLC24A4Q8NFF2 622 aa14.71□□□□□ -0.05
SRF-201ENST00000265354 ALPK3Q96L96 1907 aa14.71□□□□□ -0.06
SRF-201ENST00000265354 MARCH11A6NNE9 402 aa14.71□□□□□ -0.06
SRF-201ENST00000265354 ATOH7Q8N100 152 aa14.71□□□□□ -0.06
SRF-201ENST00000265354 ALKBH7Q9BT30 221 aaPredicted RBP14.71□□□□□ -0.06
SRF-201ENST00000265354 PPP1R14DQ9NXH3 145 aa14.71□□□□□ -0.06
SRF-201ENST00000265354 IGKV1D-13A0A0B4J2D9 117 aa14.7□□□□□ -0.06
SRF-201ENST00000265354 LNP1A1A4G5 178 aa14.7□□□□□ -0.06
SRF-201ENST00000265354 SLC22A20A6NK97 555 aa14.7□□□□□ -0.06
SRF-201ENST00000265354 E9PLN8 166 aa14.7□□□□□ -0.06
SRF-201ENST00000265354 IGKV1-13P0DP09 117 aa14.7□□□□□ -0.06
SRF-201ENST00000265354 CEBPDP49716 269 aaPredicted RBP14.7□□□□□ -0.06
SRF-201ENST00000265354 MNX1P50219 401 aaPredicted RBP14.7□□□□□ -0.06
SRF-201ENST00000265354 OR5AU1Q8NGC0 362 aa14.7□□□□□ -0.06
SRF-201ENST00000265354 TMEM208Q9BTX3 173 aa14.7□□□□□ -0.06
SRF-201ENST00000265354 VSIRQ9H7M9 311 aa14.7□□□□□ -0.06
SRF-201ENST00000265354 GCGP01275 180 aa14.7□□□□□ -0.06
SRF-201ENST00000265354 CAMPP49913 170 aa14.7□□□□□ -0.06
SRF-201ENST00000265354 CNN1P51911 297 aaKnown RBP14.7□□□□□ -0.06
SRF-201ENST00000265354 RIPPLY3P57055 190 aa14.7□□□□□ -0.06
SRF-201ENST00000265354 LRFN3Q9BTN0 628 aa14.7□□□□□ -0.06
SRF-201ENST00000265354 LHFPL1Q86WI0 220 aa14.7□□□□□ -0.06
SRF-201ENST00000265354 MRPL13Q9BYD1 178 aaKnown RBP14.7□□□□□ -0.06
SRF-201ENST00000265354 POLDIP2Q9Y2S7 368 aa14.7□□□□□ -0.06
SRF-201ENST00000265354 SIT1Q9Y3P8 196 aa14.7□□□□□ -0.06
SRF-201ENST00000265354 RRP8O43159 456 aaKnown RBP14.69□□□□□ -0.06
SRF-201ENST00000265354 IRF2P14316 349 aa14.69□□□□□ -0.06
SRF-201ENST00000265354 TBC1D28Q2M2D7 210 aa14.69□□□□□ -0.06
SRF-201ENST00000265354 PARLQ9H300 379 aa14.69□□□□□ -0.06
SRF-201ENST00000265354 GLRX2Q9NS18 164 aa14.69□□□□□ -0.06
SRF-201ENST00000265354 SLC35D1Q9NTN3 355 aa14.69□□□□□ -0.06
SRF-201ENST00000265354 TAAR3PQ9P1P4 343 aa14.69□□□□□ -0.06
SRF-201ENST00000265354 FOXD3Q9UJU5 478 aaPredicted RBP14.69□□□□□ -0.06
SRF-201ENST00000265354 IGKV3D-11A0A0A0MRZ8 115 aa14.69□□□□□ -0.06
SRF-201ENST00000265354 ZNF253O75346 499 aa14.69□□□□□ -0.06
SRF-201ENST00000265354 ICAM4Q14773 271 aa14.69□□□□□ -0.06
SRF-201ENST00000265354 KMT5CQ86Y97 462 aa14.69□□□□□ -0.06
SRF-201ENST00000265354 WDFY1Q8IWB7 410 aa14.69□□□□□ -0.06
SRF-201ENST00000265354 RANBP2P49792 3224 aaKnown RBP14.69□□□□□ -0.06
SRF-201ENST00000265354 PMELP40967 661 aa14.69□□□□□ -0.06
SRF-201ENST00000265354 SELENOVP59797 346 aa14.69□□□□□ -0.06
SRF-201ENST00000265354 PPP1R35Q8TAP8 253 aa14.69□□□□□ -0.06
SRF-201ENST00000265354 ABHD14BQ96IU4 210 aa14.69□□□□□ -0.06
SRF-201ENST00000265354 WBP1LQ9NX94 342 aa14.69□□□□□ -0.06
SRF-201ENST00000265354 NDUFS8O00217 210 aa14.68□□□□□ -0.06
SRF-201ENST00000265354 AESQ08117 197 aa14.68□□□□□ -0.06
SRF-201ENST00000265354 OR4X1Q8NH49 305 aa14.68□□□□□ -0.06
SRF-201ENST00000265354 GPR35Q9HC97 309 aa14.68□□□□□ -0.06
SRF-201ENST00000265354 FNDC1Q4ZHG4 1894 aaPredicted RBP14.68□□□□□ -0.06
SRF-201ENST00000265354 PGPEP1LA6NFU8 196 aa14.68□□□□□ -0.06
SRF-201ENST00000265354 DIRC3C9JPN6 131 aa14.68□□□□□ -0.06
SRF-201ENST00000265354 LYZL6O75951 148 aa14.68□□□□□ -0.06
SRF-201ENST00000265354 NPSP0C0P6 89 aa14.68□□□□□ -0.06
SRF-201ENST00000265354 LDLRAD2Q5SZI1 272 aa14.68□□□□□ -0.06
SRF-201ENST00000265354 TMEM171Q8WVE6 324 aa14.68□□□□□ -0.06
SRF-201ENST00000265354 ANGPTL4Q9BY76 406 aa14.68□□□□□ -0.06
SRF-201ENST00000265354 CLEC1BQ9P126 229 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms