RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 DEDDO75618 318 aa12.02□□□□□ -0.48
CDH3-201ENST00000264012 DAOP14920 347 aa12.02□□□□□ -0.48
CDH3-201ENST00000264012 TPPP2P59282 170 aa12.02□□□□□ -0.48
CDH3-201ENST00000264012 DHRS7BQ6IAN0 325 aaPredicted RBP12.02□□□□□ -0.48
CDH3-201ENST00000264012 FADS6Q8N9I5 356 aa12.02□□□□□ -0.48
CDH3-201ENST00000264012 C5orf66Q9H5L9 145 aa12.02□□□□□ -0.48
CDH3-201ENST00000264012 ZDHHC8Q9ULC8 765 aa12.02□□□□□ -0.48
CDH3-201ENST00000264012 OR51B2Q9Y5P1 312 aa12.02□□□□□ -0.48
CDH3-201ENST00000264012 PAGE4O60829 102 aa12.02□□□□□ -0.49
CDH3-201ENST00000264012 RUNX1Q01196 453 aa12.02□□□□□ -0.49
CDH3-201ENST00000264012 Q6ZT83 130 aa12.02□□□□□ -0.49
CDH3-201ENST00000264012 CISD1Q9NZ45 108 aaKnown RBP12.02□□□□□ -0.49
CDH3-201ENST00000264012 CTXND1A0A1B0GTU2 59 aa12.02□□□□□ -0.49
CDH3-201ENST00000264012 FCN1O00602 326 aa12.02□□□□□ -0.49
CDH3-201ENST00000264012 PGLYRP1O75594 196 aaPredicted RBP12.02□□□□□ -0.49
CDH3-201ENST00000264012 RSPO4Q2I0M5 234 aaPredicted RBP12.02□□□□□ -0.49
CDH3-201ENST00000264012 DOLPP1Q86YN1 238 aa12.02□□□□□ -0.49
CDH3-201ENST00000264012 SLC24A4Q8NFF2 622 aa12.02□□□□□ -0.49
CDH3-201ENST00000264012 OR4X1Q8NH49 305 aa12.02□□□□□ -0.49
CDH3-201ENST00000264012 ISOC2Q96AB3 205 aa12.02□□□□□ -0.49
CDH3-201ENST00000264012 RHOVQ96L33 236 aa12.02□□□□□ -0.49
CDH3-201ENST00000264012 LPAR2Q9HBW0 351 aa12.02□□□□□ -0.49
CDH3-201ENST00000264012 CD74P04233 296 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 SSX7Q7RTT5 188 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 NOL4LQ96MY1 436 aaPredicted RBP12.01□□□□□ -0.49
CDH3-201ENST00000264012 GPHA2Q96T91 129 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 SFXN3Q9BWM7 321 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 DICER1Q9UPY3 1922 aaKnown RBP12.01□□□□□ -0.49
CDH3-201ENST00000264012 C7orf77A4D0Y5 90 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 MFNGO00587 321 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 GFRA3O60609 400 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 GAPDHP04406 335 aaKnown RBP12.01□□□□□ -0.49
CDH3-201ENST00000264012 FABP4P15090 132 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 PMCHP20382 165 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 SLC16A13Q7RTY0 426 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 GP6Q9HCN6 339 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 A0A0G2JK05 382 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 MFSD2BA6NFX1 497 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 HIST1H3AP68431 136 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 CXorf66Q5JRM2 361 aaPredicted RBP12.01□□□□□ -0.49
CDH3-201ENST00000264012 ZNF645Q8N7E2 425 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 PCGF1Q9BSM1 259 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 ASCL3Q9NQ33 180 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 ELOA3CA0A087WX78 387 aaPredicted RBP12.01□□□□□ -0.49
CDH3-201ENST00000264012 PRR19A6NJB7 356 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 KIAA1324LA8MWY0 1029 aaPredicted RBP12.01□□□□□ -0.49
CDH3-201ENST00000264012 SMIM17P0DL12 118 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 FA2HQ7L5A8 372 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 TCTEX1D1Q8N7M0 179 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 ZNF596Q8TC21 504 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 IL19Q9UHD0 177 aa12.01□□□□□ -0.49
CDH3-201ENST00000264012 J3QW42 95 aa12□□□□□ -0.49
CDH3-201ENST00000264012 MMP9P14780 707 aa12□□□□□ -0.49
CDH3-201ENST00000264012 H2BFSP57053 126 aa12□□□□□ -0.49
CDH3-201ENST00000264012 RPEL1Q2QD12 228 aa12□□□□□ -0.49
CDH3-201ENST00000264012 OR10C1Q96KK4 312 aa12□□□□□ -0.49
CDH3-201ENST00000264012 ARL2-SNX15V9GYD0 113 aa12□□□□□ -0.49
CDH3-201ENST00000264012 HOXA6P31267 233 aa12□□□□□ -0.49
CDH3-201ENST00000264012 IQCJQ1A5X6 159 aa12□□□□□ -0.49
CDH3-201ENST00000264012 SLC25A53Q5H9E4 307 aa12□□□□□ -0.49
CDH3-201ENST00000264012 CCDC144NLQ6NUI1 221 aa12□□□□□ -0.49
CDH3-201ENST00000264012 OR2T10Q8NGZ9 312 aa12□□□□□ -0.49
CDH3-201ENST00000264012 ZNF552Q9H707 407 aaPredicted RBP12□□□□□ -0.49
CDH3-201ENST00000264012 CD1BP29016 333 aa12□□□□□ -0.49
CDH3-201ENST00000264012 ERVS71-1P61550 626 aa12□□□□□ -0.49
CDH3-201ENST00000264012 OR10G8Q8NGN5 311 aa12□□□□□ -0.49
CDH3-201ENST00000264012 LOC102723996A0A087X1L8 192 aa12□□□□□ -0.49
CDH3-201ENST00000264012 ERVFRD-1P60508 538 aa12□□□□□ -0.49
CDH3-201ENST00000264012 SUMO1P63165 101 aaKnown RBP12□□□□□ -0.49
CDH3-201ENST00000264012 DLK1P80370 383 aa12□□□□□ -0.49
CDH3-201ENST00000264012 UNC119Q13432 240 aa12□□□□□ -0.49
CDH3-201ENST00000264012 ZNF660Q6AZW8 331 aaPredicted RBP12□□□□□ -0.49
CDH3-201ENST00000264012 C1QL2Q7Z5L3 287 aa12□□□□□ -0.49
CDH3-201ENST00000264012 FAM122AQ96E09 287 aa12□□□□□ -0.49
CDH3-201ENST00000264012 CALYQ9NYX4 217 aa12□□□□□ -0.49
CDH3-201ENST00000264012 LOC102723971A0A1B0GUV8 181 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 LINC00271P0C7V0 271 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 FAM157CP0CG43 387 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 NAT2P11245 290 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 RPS11P62280 158 aaKnown RBP eCLIP11.99□□□□□ -0.49
CDH3-201ENST00000264012 CFHR1Q03591 330 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 C10orf113Q5VZT2 155 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 TNFRSF19Q9NS68 423 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 SYNGR3O43761 229 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 SERF2P84101 59 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 KCNMB1Q16558 191 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 FGFRL1Q8N441 504 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 OR5P3Q8WZ94 311 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 RTN4RQ9BZR6 473 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 hCG_38984A0A1B0GV85 526 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 LYPD3O95274 346 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 ZNF708P17019 499 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 CAMPP49913 170 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 MRPL30Q8TCC3 161 aaKnown RBP11.99□□□□□ -0.49
CDH3-201ENST00000264012 Q8WTZ3 238 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 SLC2A8Q9NY64 477 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 H3BQ15 152 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 ID4P47928 161 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 SULT1A2P50226 295 aa11.99□□□□□ -0.49
CDH3-201ENST00000264012 CD81P60033 236 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms