RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ZDHHC16Q969W1 377 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 SPSB4Q96A44 273 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 RP1L1Q8IWN7 2480 aaPredicted RBP10.5□□□□□ -0.73
CHMP3-201ENST00000263856 DNPH1O43598 174 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 CEACAM1P13688 526 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 NDUFB7P17568 137 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 PSMB3P49720 205 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 PRSS8Q16651 343 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 FIP1L1Q6UN15 594 aaKnown RBP10.5□□□□□ -0.73
CHMP3-201ENST00000263856 ZNF573Q86YE8 665 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 FGFRL1Q8N441 504 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 RPP25LQ8N5L8 163 aaKnown RBP10.5□□□□□ -0.73
CHMP3-201ENST00000263856 WDR61Q9GZS3 305 aaKnown RBP10.5□□□□□ -0.73
CHMP3-201ENST00000263856 OR2D2Q9H210 308 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 TMEM9BQ9NQ34 198 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 BOKQ9UMX3 212 aaPredicted RBP10.5□□□□□ -0.73
CHMP3-201ENST00000263856 DEFB108AA8MXU0 73 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 B4DEV8 164 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 IFNA10P01566 189 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 IGHV3-13P01766 116 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 IGHV3-7P01780 117 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 OPN1MWP04001 364 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 OPN1MW2P0DN77 364 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 OPN1MW3P0DN78 364 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 FAM3BP58499 235 aaPredicted RBP10.5□□□□□ -0.73
CHMP3-201ENST00000263856 MEF2BQ02080 365 aaPredicted RBP10.5□□□□□ -0.73
CHMP3-201ENST00000263856 FFAR4Q5NUL3 377 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 CST9LP1Q5W188 147 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 NUFIP2Q7Z417 695 aaKnown RBP10.5□□□□□ -0.73
CHMP3-201ENST00000263856 MRGPRGQ86SM5 289 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 MRPL41Q8IXM3 137 aaKnown RBP10.5□□□□□ -0.73
CHMP3-201ENST00000263856 OR5A2Q8NGI9 324 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 ABHD14BQ96IU4 210 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 PARLQ9H300 379 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 PRDM6Q9NQX0 595 aa10.5□□□□□ -0.73
CHMP3-201ENST00000263856 PAGE4O60829 102 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 OR2H2O95918 312 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 ZFP36L1Q07352 338 aaKnown RBP10.49□□□□□ -0.73
CHMP3-201ENST00000263856 TFF3Q07654 80 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 PMS2P11Q13670 270 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 LRRC75BQ2VPJ9 315 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 TRIM61Q5EBN2 209 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 ACSM6Q6P461 480 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 DRAM1Q8N682 238 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 OR10G4Q8NGN3 311 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 OR10G9Q8NGN4 311 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 OR10G7Q8NGN6 311 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 RFESDQ8TAC1 157 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 LIN7CQ9NUP9 197 aaKnown RBP10.49□□□□□ -0.73
CHMP3-201ENST00000263856 NAT8Q9UHE5 227 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 MT-CO3P00414 261 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 ZNF709Q8N972 641 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 CT55Q8WUE5 264 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 FAM90A10PA6NDY2 464 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 FAM90A18PA6NE21 464 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 FAM90A16PA6NEW6 464 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 FAM90A20PA6NIJ5 464 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 FAM90A8PA6NJQ4 464 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 FAM90A7PA6NKC0 464 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 FAM90A22PA8MWA6 464 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 FAM90A12PA8MX19 464 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 FAM90A5PA8MXJ8 464 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 FAM90A23PA8MXZ1 464 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 PDGFBP01127 241 aaPredicted RBP10.49□□□□□ -0.73
CHMP3-201ENST00000263856 FAM90A15PP0C7V4 464 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 FAM90A13PP0C7W8 464 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 FAM90A14PP0C7W9 464 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 FAM90A24PP0C7X0 464 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 GZMHP20718 246 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 OR3A1P47881 315 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 CD81P60033 236 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 PKIAP61925 76 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 KRTAP27-1Q3LI81 207 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 ZNF585BQ52M93 769 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 ABHD17BQ5VST6 288 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 DPPA3Q6W0C5 159 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 OR5P3Q8WZ94 311 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 PITPNC1Q9UKF7 332 aa10.49□□□□□ -0.73
CHMP3-201ENST00000263856 LOC400499M0QZD8 3231 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 PGPEP1LA6NFU8 196 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 C1QTNF9BB2RNN3 333 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 ZG16O60844 167 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 WNT5AP41221 380 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 DCAF12Q5T6F0 453 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 OR1L1Q8NH94 360 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 OR51I2Q9H344 312 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 AMBPP02760 352 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 CELA3BP08861 270 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 RPL23P62829 140 aaKnown RBP10.48□□□□□ -0.73
CHMP3-201ENST00000263856 ALKBH6Q3KRA9 238 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 COLCA1Q6ZS62 124 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 TIPARPQ7Z3E1 657 aaKnown RBP10.48□□□□□ -0.73
CHMP3-201ENST00000263856 OR52L2PQ8NGH6 319 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 OR1P1Q8NH06 330 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 IL22RA2Q969J5 263 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 DEFB127Q9H1M4 99 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 RIMS4Q9H426 269 aaPredicted RBP10.48□□□□□ -0.73
CHMP3-201ENST00000263856 FZR1Q9UM11 496 aa10.48□□□□□ -0.73
CHMP3-201ENST00000263856 RAC2P15153 192 aa10.47□□□□□ -0.73
CHMP3-201ENST00000263856 GFRA1P56159 465 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms