RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 CLEC18AA5D8T8 446 aa13.1□□□□□ -0.31
VPS26A-201ENST00000263559 RAB14P61106 215 aa13.1□□□□□ -0.31
VPS26A-201ENST00000263559 CLEC18CQ8NCF0 446 aa13.1□□□□□ -0.31
VPS26A-201ENST00000263559 TMEM204Q9BSN7 226 aa13.1□□□□□ -0.31
VPS26A-201ENST00000263559 CYTL1Q9NRR1 136 aa13.1□□□□□ -0.31
VPS26A-201ENST00000263559 ZFP57Q9NU63 452 aa13.1□□□□□ -0.31
VPS26A-201ENST00000263559 USF3Q68DE3 2245 aa13.1□□□□□ -0.31
VPS26A-201ENST00000263559 ABCA4P78363 2273 aa13.09□□□□□ -0.31
VPS26A-201ENST00000263559 E5RGE8 158 aa13.09□□□□□ -0.31
VPS26A-201ENST00000263559 ZG16O60844 167 aa13.09□□□□□ -0.31
VPS26A-201ENST00000263559 RPL12P30050 165 aaKnown RBP13.09□□□□□ -0.31
VPS26A-201ENST00000263559 RPL30P62888 115 aaKnown RBP13.09□□□□□ -0.31
VPS26A-201ENST00000263559 BTNL3Q6UXE8 466 aa13.09□□□□□ -0.31
VPS26A-201ENST00000263559 TCF23Q7RTU1 214 aa13.09□□□□□ -0.31
VPS26A-201ENST00000263559 NSG2Q9Y328 171 aa13.09□□□□□ -0.31
VPS26A-201ENST00000263559 POMT1Q9Y6A1 747 aa13.09□□□□□ -0.31
VPS26A-201ENST00000263559 TRGV10A0A0A0MS01 117 aa13.09□□□□□ -0.31
VPS26A-201ENST00000263559 NKX6-3A6NJ46 265 aa13.09□□□□□ -0.31
VPS26A-201ENST00000263559 RNF212BA8MTL3 300 aa13.09□□□□□ -0.31
VPS26A-201ENST00000263559 YPEL1O60688 119 aa13.09□□□□□ -0.31
VPS26A-201ENST00000263559 IGHV3-7P01780 117 aa13.09□□□□□ -0.31
VPS26A-201ENST00000263559 C4orf17Q53FE4 359 aa13.09□□□□□ -0.31
VPS26A-201ENST00000263559 GPR146Q96CH1 333 aa13.09□□□□□ -0.31
VPS26A-201ENST00000263559 YPEL2Q96QA6 119 aa13.09□□□□□ -0.31
VPS26A-201ENST00000263559 SDHAF2Q9NX18 166 aa13.09□□□□□ -0.31
VPS26A-201ENST00000263559 RCL1Q9Y2P8 373 aaKnown RBP13.09□□□□□ -0.31
VPS26A-201ENST00000263559 KBTBD11-OT1A0A1B0GTJ5 212 aa13.08□□□□□ -0.31
VPS26A-201ENST00000263559 S100A1P23297 94 aa13.08□□□□□ -0.31
VPS26A-201ENST00000263559 NKX2-1P43699 371 aaPredicted RBP13.08□□□□□ -0.31
VPS26A-201ENST00000263559 CXorf66Q5JRM2 361 aaPredicted RBP13.08□□□□□ -0.31
VPS26A-201ENST00000263559 UTF1Q5T230 341 aa13.08□□□□□ -0.31
VPS26A-201ENST00000263559 THOC7Q6I9Y2 204 aaKnown RBP13.08□□□□□ -0.31
VPS26A-201ENST00000263559 DMBX1Q8NFW5 382 aa13.08□□□□□ -0.31
VPS26A-201ENST00000263559 EDARADDQ8WWZ3 215 aa13.08□□□□□ -0.31
VPS26A-201ENST00000263559 ZC4H2Q9NQZ6 224 aa13.08□□□□□ -0.31
VPS26A-201ENST00000263559 CLN8Q9UBY8 286 aa13.08□□□□□ -0.31
VPS26A-201ENST00000263559 YLPM1P49750 1951 aaKnown RBP13.08□□□□□ -0.31
VPS26A-201ENST00000263559 IGHV1-69-2A0A0G2JMI3 117 aa13.08□□□□□ -0.32
VPS26A-201ENST00000263559 LINC00862A6NCI5 91 aa13.08□□□□□ -0.32
VPS26A-201ENST00000263559 TNFRSF13BO14836 293 aaPredicted RBP13.08□□□□□ -0.32
VPS26A-201ENST00000263559 CLDN14O95500 239 aa13.08□□□□□ -0.32
VPS26A-201ENST00000263559 NDUFB7P17568 137 aa13.08□□□□□ -0.32
VPS26A-201ENST00000263559 ZNF134P52741 427 aa13.08□□□□□ -0.32
VPS26A-201ENST00000263559 MSMO1Q15800 293 aa13.08□□□□□ -0.32
VPS26A-201ENST00000263559 SLC25A10Q9UBX3 287 aaPredicted RBP13.08□□□□□ -0.32
VPS26A-201ENST00000263559 FCN3O75636 299 aa13.07□□□□□ -0.32
VPS26A-201ENST00000263559 EPHA1P21709 976 aa13.07□□□□□ -0.32
VPS26A-201ENST00000263559 POLR2GP62487 172 aaKnown RBP eCLIP13.07□□□□□ -0.32
VPS26A-201ENST00000263559 IZUMO4Q1ZYL8 232 aa13.07□□□□□ -0.32
VPS26A-201ENST00000263559 LYPD2Q6UXB3 125 aa13.07□□□□□ -0.32
VPS26A-201ENST00000263559 PLEKHA2Q9HB19 425 aa13.07□□□□□ -0.32
VPS26A-201ENST00000263559 SPTBN1Q01082 2364 aaKnown RBP13.07□□□□□ -0.32
VPS26A-201ENST00000263559 ACACBO00763 2458 aa13.07□□□□□ -0.32
VPS26A-201ENST00000263559 PIGBOS1A0A0B4J2F0 54 aa13.07□□□□□ -0.32
VPS26A-201ENST00000263559 RAMP3O60896 148 aa13.07□□□□□ -0.32
VPS26A-201ENST00000263559 IGKV1-5P01602 117 aa13.07□□□□□ -0.32
VPS26A-201ENST00000263559 LPAR6P43657 344 aa13.07□□□□□ -0.32
VPS26A-201ENST00000263559 LINC00205P59089 165 aa13.07□□□□□ -0.32
VPS26A-201ENST00000263559 Q3ZCU0 254 aa13.07□□□□□ -0.32
VPS26A-201ENST00000263559 OR2B11Q5JQS5 317 aa13.07□□□□□ -0.32
VPS26A-201ENST00000263559 Q6ZRM9 215 aa13.07□□□□□ -0.32
VPS26A-201ENST00000263559 MAGT1Q9H0U3 335 aa13.07□□□□□ -0.32
VPS26A-201ENST00000263559 NXPH3O95157 252 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 CLDN1O95832 211 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 BRWD1-AS2P59051 145 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 ID3Q02535 119 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 RNASE11Q8TAA1 199 aaKnown RBP13.06□□□□□ -0.32
VPS26A-201ENST00000263559 ITLN2Q8WWU7 325 aaPredicted RBP13.06□□□□□ -0.32
VPS26A-201ENST00000263559 CORO2AQ92828 525 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 LEAP2Q969E1 77 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 LSM10Q969L4 123 aaKnown RBP13.06□□□□□ -0.32
VPS26A-201ENST00000263559 CITED4Q96RK1 184 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 C11orf1Q9H5F2 150 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 LINC00473A8K010 186 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 C17orf98A8MV24 154 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 PROP1O75360 226 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 PITX3O75364 302 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 NMBP08949 121 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 GPR12P47775 334 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 AKR1C2P52895 323 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 CATR1Q13166 79 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 CLEC9AQ6UXN8 241 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 STOML3Q8TAV4 291 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 TCTEX1D2Q8WW35 142 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 RAB9BQ9NP90 201 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 GFOD1Q9NXC2 390 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 A0A1B0GU03 582 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 ZNF729A6NN14 1252 aaPredicted RBP13.06□□□□□ -0.32
VPS26A-201ENST00000263559 LYNX1G3V0Z9 82 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 LYNX1P0DP58 116 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 P2RY1P47900 373 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 HFEQ30201 348 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 FAM74A1Q5RGS3 127 aa13.06□□□□□ -0.32
VPS26A-201ENST00000263559 LRBAP50851 2863 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 LEUTXA8MZ59 168 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 SLC31A2O15432 143 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 MMP23AO75900 390 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 SLC25A6P12236 298 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 TPT1P13693 172 aaKnown RBP13.05□□□□□ -0.32
VPS26A-201ENST00000263559 COL8A2P25067 703 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms