RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 TMEM218A2RU14 115 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 ZIC3O60481 467 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 CA2P00918 260 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 SSC4DQ8WTU2 575 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 COX14Q96I36 57 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 TMEFF2Q9UIK5 374 aaPredicted RBP12.88□□□□□ -0.35
CCDC6-201ENST00000263102 RGPD5Q99666 1765 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 MPC2O95563 127 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 MPV17P39210 176 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 PSG4Q00888 419 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 RIMKLAQ8IXN7 391 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 C17orf47Q8NEP4 570 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 CD99P14209 185 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 SPNP16150 400 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 ZNF25P17030 456 aaPredicted RBP12.88□□□□□ -0.35
CCDC6-201ENST00000263102 AANATQ16613 207 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 PGPA6NDG6 321 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 MMD2Q8IY49 270 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 ZNF721Q8TF20 911 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 RALYQ9UKM9 306 aaKnown RBP12.87□□□□□ -0.35
CCDC6-201ENST00000263102 FUT9Q9Y231 359 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 HMX2A2RU54 273 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 DNAL4O96015 105 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 EFNB2P52799 333 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 LYZL2Q7Z4W2 148 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 ABHD17AQ96GS6 310 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 SFXN3Q9BWM7 321 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 PILRBQ9UKJ0 227 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 HSF4Q9ULV5 492 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 MYH15Q9Y2K3 1946 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 MYH4Q9Y623 1939 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 NPIPB11E5RHQ5 1161 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 IFNL4K9M1U5 179 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 GDF9O60383 454 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 FUCA1P04066 466 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 CADM3Q8N126 398 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 PDE6DO43924 150 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 MZB1Q8WU39 189 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 OPN4Q9UHM6 478 aa12.87□□□□□ -0.35
CCDC6-201ENST00000263102 CDC42EP2O14613 210 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 MBPP02686 304 aaPredicted RBP12.86□□□□□ -0.35
CCDC6-201ENST00000263102 COL5A1-AS1Q5SY13 56 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 PXMP4Q9Y6I8 212 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 B9A039 149 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 ZIC1Q15915 447 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 MBNL2Q5VZF2 373 aaKnown RBP12.86□□□□□ -0.35
CCDC6-201ENST00000263102 OR5AU1Q8NGC0 362 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 MARS2Q96GW9 593 aaKnown RBP12.86□□□□□ -0.35
CCDC6-201ENST00000263102 C12orf57Q99622 126 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 IGHV3OR16-8A0A075B7F1 116 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 TCRBV16S1A1N1A0A5B0 115 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 NDUFA2O43678 99 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 PEMTQ9UBM1 199 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 LMX1BO60663 402 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 APOBEC3AP31941 199 aaPredicted RBP12.86□□□□□ -0.35
CCDC6-201ENST00000263102 FDCSPQ8NFU4 85 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 C8orf46Q8TAG6 207 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 ANKRD36CQ5JPF3 1778 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 MMP9P14780 707 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 PRB3Q04118 309 aaPredicted RBP12.86□□□□□ -0.35
CCDC6-201ENST00000263102 COPS9Q8WXC6 57 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 MTFP1Q9UDX5 166 aa12.86□□□□□ -0.35
CCDC6-201ENST00000263102 EXOGQ9Y2C4 368 aaKnown RBP12.86□□□□□ -0.35
CCDC6-201ENST00000263102 AMY1AP04745 511 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 TMEM177Q53S58 311 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 WNT5BQ9H1J7 359 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 FRRS1LQ9P0K9 344 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 DLG5Q8TDM6 1919 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 SYNGR3O43761 229 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 EWSR1Q01844 656 aaKnown RBP eCLIP12.85□□□□□ -0.35
CCDC6-201ENST00000263102 ZBTB34Q8NCN2 500 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 ZNF501Q96CX3 271 aaPredicted RBP12.85□□□□□ -0.35
CCDC6-201ENST00000263102 HIST1H4GQ99525 98 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 DIRC3C9JPN6 131 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 PLPP2O43688 288 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 BGLAPP02818 100 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 CD1AP06126 327 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 RNASE4P34096 147 aaKnown RBP12.85□□□□□ -0.35
CCDC6-201ENST00000263102 FAM27E3Q08E93 113 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 ADAD2Q8NCV1 583 aaKnown RBP12.85□□□□□ -0.35
CCDC6-201ENST00000263102 SELENOKQ9Y6D0 94 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 FER1L6Q2WGJ9 1857 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 GPR61Q9BZJ8 451 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 AKIP1Q9NQ31 210 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 PAPPA2Q9BXP8 1791 aa12.85□□□□□ -0.35
CCDC6-201ENST00000263102 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.84□□□□□ -0.35
CCDC6-201ENST00000263102 C7orf71A4D174 169 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 RBM11P57052 281 aaKnown RBP12.84□□□□□ -0.35
CCDC6-201ENST00000263102 DLK1P80370 383 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 COLCA1Q6ZS62 124 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 FAM131CQ96AQ9 280 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 C10orf35Q96D05 121 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 DTX4Q9Y2E6 619 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 RPL34P49207 117 aaKnown RBP12.84□□□□□ -0.35
CCDC6-201ENST00000263102 PLPPR5Q32ZL2 321 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 ELOVL5Q9NYP7 299 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 F11RQ9Y624 299 aaKnown RBP12.84□□□□□ -0.35
CCDC6-201ENST00000263102 TSPAN2O60636 221 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 CEACAM21Q3KPI0 293 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 REC114Q7Z4M0 266 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms