RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 C6orf15Q6UXA7 325 aaPredicted RBP7.26□□□□□ -1.25
LDB3-201ENST00000263066 ZNF841Q6ZN19 808 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 Q6ZWC4 215 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 VN1R4Q7Z5H5 301 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 HOGA1Q86XE5 327 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 APOBEC4Q8WW27 367 aaKnown RBP7.26□□□□□ -1.25
LDB3-201ENST00000263066 ANAPC16Q96DE5 110 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 PLEKHF2Q9H8W4 249 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 WFDC1Q9HC57 220 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 GPR132Q9UNW8 380 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 MYO9AB2RTY4 2548 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.26□□□□□ -1.25
LDB3-201ENST00000263066 HRKO00198 91 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 SH2D1BO14796 132 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 TNFSF14O43557 240 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 CELA2AP08217 269 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 SLC35B1P78383 322 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 ZNF260Q3ZCT1 412 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 ASCL5Q7RTU5 278 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 C1orf174Q8IYL3 243 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 MRPL30Q8TCC3 161 aaKnown RBP7.26□□□□□ -1.25
LDB3-201ENST00000263066 RNF133Q8WVZ7 376 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 SLC25A22Q9H936 323 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 NRN1Q9NPD7 142 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 GPR84Q9NQS5 396 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 KCNIP1Q9NZI2 227 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 CDC42EP3Q9UKI2 254 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 LOC107986453A0A1B0GWG9 222 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 SHISA8B8ZZ34 492 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 H3BUT2 72 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 RAD51DO75771 328 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 P04436 131 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 HLA-DOBP13765 273 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 MAS1LP35410 378 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 SRP14P37108 136 aaKnown RBP7.26□□□□□ -1.25
LDB3-201ENST00000263066 RSPO4Q2I0M5 234 aaPredicted RBP7.26□□□□□ -1.25
LDB3-201ENST00000263066 SLC22A24Q8N4F4 322 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 TMEM251Q8N6I4 163 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 WDR61Q9GZS3 305 aaKnown RBP7.26□□□□□ -1.25
LDB3-201ENST00000263066 CDH20Q9HBT6 801 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 IGHV1-69-2A0A0G2JMI3 117 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 LOC102723971A0A1B0GUV8 181 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 M0R2Z0 102 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 TSPAN2O60636 221 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 IGHV3-9P01782 118 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 IGLC2P0DOY2 106 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 IGLC3P0DOY3 106 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 PEBP1P30086 187 aaKnown RBP7.25□□□□□ -1.25
LDB3-201ENST00000263066 THBS3P49746 956 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 HERV-K104P63124 156 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 LCN12Q6JVE5 192 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 OR5D14Q8NGL3 314 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 CLDND2Q8NHS1 167 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 LINC00615Q96LM1 132 aaPredicted RBP7.25□□□□□ -1.25
LDB3-201ENST00000263066 C4orf45Q96LM5 186 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 SRSF8Q9BRL6 282 aaKnown RBP7.25□□□□□ -1.25
LDB3-201ENST00000263066 MRPL18Q9H0U6 180 aaKnown RBP7.25□□□□□ -1.25
LDB3-201ENST00000263066 PLA2G2EQ9NZK7 142 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 B9D1Q9UPM9 204 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 DCHS1Q96JQ0 3298 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 K7N7A8 449 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 SYNGR4O95473 234 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 PSG9Q00887 426 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.25□□□□□ -1.25
LDB3-201ENST00000263066 FCRL6Q6DN72 434 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 CCDC71LQ8N9Z2 235 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 RPS4Y2Q8TD47 263 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 DNASE2BQ8WZ79 361 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 NINJ1Q92982 152 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 CNRIP1Q96F85 164 aaPredicted RBP7.25□□□□□ -1.25
LDB3-201ENST00000263066 SLC35A4Q96G79 324 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 POM121L2Q96KW2 1035 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 TIMP4Q99727 224 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 RSG1Q9BU20 258 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 OR51B2Q9Y5P1 312 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 FRYQ5TBA9 3013 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 MUC21A0A0G2JKD1 596 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 MUC21A0A140T8X8 626 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 NKX2-8O15522 239 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 PF4V1P10720 104 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 EGR1P18146 543 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 IL3RAP26951 378 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 ADMP35318 185 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 IL13RA2Q14627 380 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 MUC21Q5SSG8 566 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 OR51G1Q8NGK1 321 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 ARHGAP5-AS1Q96IT6 56 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 OR2A5Q96R48 311 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 SCNM1Q9BWG6 230 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 DEFB127Q9H1M4 99 aa7.25□□□□□ -1.25
LDB3-201ENST00000263066 TECRQ9NZ01 308 aaKnown RBP7.25□□□□□ -1.25
LDB3-201ENST00000263066 PRR33A8MZF0 331 aa7.24□□□□□ -1.25
LDB3-201ENST00000263066 NPY1RP25929 384 aa7.24□□□□□ -1.25
LDB3-201ENST00000263066 TCL1AP56279 114 aa7.24□□□□□ -1.25
LDB3-201ENST00000263066 SRSF4Q08170 494 aaKnown RBP7.24□□□□□ -1.25
LDB3-201ENST00000263066 SLC25A34Q6PIV7 304 aa7.24□□□□□ -1.25
LDB3-201ENST00000263066 MRGPRGQ86SM5 289 aa7.24□□□□□ -1.25
LDB3-201ENST00000263066 MTURNQ8N3F0 131 aa7.24□□□□□ -1.25
LDB3-201ENST00000263066 KCNG3Q8TAE7 436 aa7.24□□□□□ -1.25
LDB3-201ENST00000263066 ZPLD1Q8TCW7 415 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms