RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 OR2V2Q96R30 315 aa12.42□□□□□ -0.42
CUX2-201ENST00000261726 SF3B6Q9Y3B4 125 aaKnown RBP12.42□□□□□ -0.42
CUX2-201ENST00000261726 FABP2P12104 132 aa12.42□□□□□ -0.42
CUX2-201ENST00000261726 RUNX1Q01196 453 aa12.42□□□□□ -0.42
CUX2-201ENST00000261726 ABLIM2Q6H8Q1 611 aa12.42□□□□□ -0.42
CUX2-201ENST00000261726 SGK494Q96LW2 274 aa12.42□□□□□ -0.42
CUX2-201ENST00000261726 DUX5Q96PT3 197 aa12.42□□□□□ -0.42
CUX2-201ENST00000261726 PRSS27Q9BQR3 290 aa12.42□□□□□ -0.42
CUX2-201ENST00000261726 TTTY12Q9BZ98 90 aa12.42□□□□□ -0.42
CUX2-201ENST00000261726 LTBP1Q14766 1721 aa12.42□□□□□ -0.42
CUX2-201ENST00000261726 LMX1BO60663 402 aa12.42□□□□□ -0.42
CUX2-201ENST00000261726 FAM74A4Q5TZK3 123 aa12.42□□□□□ -0.42
CUX2-201ENST00000261726 ZBTB34Q8NCN2 500 aa12.41□□□□□ -0.42
CUX2-201ENST00000261726 TMEM56-RWDD3S4R434 201 aa12.41□□□□□ -0.42
CUX2-201ENST00000261726 LIFP15018 202 aa12.41□□□□□ -0.42
CUX2-201ENST00000261726 IBA57Q5T440 356 aaKnown RBP12.41□□□□□ -0.42
CUX2-201ENST00000261726 NEU1Q99519 415 aa12.41□□□□□ -0.42
CUX2-201ENST00000261726 FCGR2BP31994 310 aaPredicted RBP12.41□□□□□ -0.42
CUX2-201ENST00000261726 EFNB2P52799 333 aa12.41□□□□□ -0.42
CUX2-201ENST00000261726 UBE2V2Q15819 145 aa12.41□□□□□ -0.42
CUX2-201ENST00000261726 UNQ5815/PRO19632Q6UWF5 114 aa12.41□□□□□ -0.42
CUX2-201ENST00000261726 A0A1W2PS18 150 aa12.41□□□□□ -0.42
CUX2-201ENST00000261726 NDUFB4O95168 129 aa12.41□□□□□ -0.42
CUX2-201ENST00000261726 HPRT1P00492 218 aa12.41□□□□□ -0.42
CUX2-201ENST00000261726 VSIG8P0DPA2 414 aa12.41□□□□□ -0.42
CUX2-201ENST00000261726 ZDHHC8Q9ULC8 765 aa12.41□□□□□ -0.42
CUX2-201ENST00000261726 GAPDHP04406 335 aaKnown RBP12.41□□□□□ -0.42
CUX2-201ENST00000261726 CACNG7P62955 275 aa12.41□□□□□ -0.42
CUX2-201ENST00000261726 WDR34Q96EX3 536 aa12.41□□□□□ -0.42
CUX2-201ENST00000261726 KLK13Q9UKR3 277 aa12.41□□□□□ -0.42
CUX2-201ENST00000261726 A0A0B4J293 547 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 WNT9BO14905 357 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 RBFOX2O43251 390 aaKnown RBP eCLIP12.4□□□□□ -0.42
CUX2-201ENST00000261726 SCNM1Q9BWG6 230 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 V9GYH0 126 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 LINC00869P0C866 280 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 ZFP36L2P47974 494 aaKnown RBP12.4□□□□□ -0.42
CUX2-201ENST00000261726 HMGA2P52926 109 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 FOXL2P58012 376 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 CX3CL1P78423 397 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 ALG14Q96F25 216 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 RAX2Q96IS3 184 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 IGKV3-20P01619 116 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 ZAR1Q86SH2 424 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 LSM10Q969L4 123 aaKnown RBP12.4□□□□□ -0.42
CUX2-201ENST00000261726 COX14Q96I36 57 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 ZNF385AQ96PM9 386 aaKnown RBP12.4□□□□□ -0.42
CUX2-201ENST00000261726 NPVFQ9HCQ7 196 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 A8MWL6 223 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 ZNF658BQ4V348 819 aaPredicted RBP12.4□□□□□ -0.42
CUX2-201ENST00000261726 CYB561D1Q8N8Q1 229 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 CDX2Q99626 313 aaPredicted RBP12.4□□□□□ -0.42
CUX2-201ENST00000261726 PAPPA2Q9BXP8 1791 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 BGLAPP02818 100 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 RBM11P57052 281 aaKnown RBP12.4□□□□□ -0.42
CUX2-201ENST00000261726 CHST5Q9GZS9 411 aa12.4□□□□□ -0.42
CUX2-201ENST00000261726 RGPD3A6NKT7 1758 aaPredicted RBP12.4□□□□□ -0.43
CUX2-201ENST00000261726 RGPD4Q7Z3J3 1758 aa12.4□□□□□ -0.43
CUX2-201ENST00000261726 hCG_38984A0A1B0GV85 526 aa12.4□□□□□ -0.43
CUX2-201ENST00000261726 TTC32Q5I0X7 151 aa12.4□□□□□ -0.43
CUX2-201ENST00000261726 DCAF10Q5QP82 559 aa12.4□□□□□ -0.43
CUX2-201ENST00000261726 FOXC2Q99958 501 aa12.4□□□□□ -0.43
CUX2-201ENST00000261726 C7orf71A4D174 169 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 TSPAN13O95857 204 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 ANOS1P23352 680 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 ZNF56Q15929 161 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 C9orf62Q8N4C0 152 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 MRPS18BQ9Y676 258 aaKnown RBP12.39□□□□□ -0.43
CUX2-201ENST00000261726 PGPA6NDG6 321 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 CDS2O95674 445 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 FAM3BP58499 235 aaPredicted RBP12.39□□□□□ -0.43
CUX2-201ENST00000261726 CIRBPQ14011 172 aaKnown RBP12.39□□□□□ -0.43
CUX2-201ENST00000261726 OPN4Q9UHM6 478 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 MCM3APO60318 1980 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 IGHV4-34P06331 123 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 SMIM6P0DI80 62 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 CXorf51AA0A1B0GTR3 108 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 REG1AP05451 166 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 FCGR3AP08637 254 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 IGHV3OR16-10A0A075B7F0 116 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 ZNF250P15622 560 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 FXYD3Q14802 87 aa12.39□□□□□ -0.43
CUX2-201ENST00000261726 RBBP6Q7Z6E9 1792 aaKnown RBP12.39□□□□□ -0.43
CUX2-201ENST00000261726 COL25A1Q9BXS0 654 aaPredicted RBP12.39□□□□□ -0.43
CUX2-201ENST00000261726 CDC42EP3Q9UKI2 254 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 PMS2CLQ68D20 193 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 MAP1LC3AQ9H492 121 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 PSMB11A5LHX3 300 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 C9orf40Q8IXQ3 194 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 OR4C13Q8NGP0 309 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 EID2BQ96D98 161 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 DMRTA2Q96SC8 542 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 K7ERU9 68 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 OR52M1Q8NGK5 317 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 GPR82Q96P67 336 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 NUDT16L1Q9BRJ7 211 aaKnown RBP12.38□□□□□ -0.43
CUX2-201ENST00000261726 H3BTX0 84 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 TSPAN2O60636 221 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 NAT2P11245 290 aa12.38□□□□□ -0.43
CUX2-201ENST00000261726 IL11P20809 199 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms