RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 TBL2Q9Y4P3 447 aaKnown RBP9.37□□□□□ -0.91
SLC6A4-201ENST00000261707 C19orf67A6NJJ6 358 aa9.37□□□□□ -0.91
SLC6A4-201ENST00000261707 UBE2CO00762 179 aa9.37□□□□□ -0.91
SLC6A4-201ENST00000261707 RBFOX2O43251 390 aaKnown RBP eCLIP9.37□□□□□ -0.91
SLC6A4-201ENST00000261707 FGF5P12034 268 aa9.37□□□□□ -0.91
SLC6A4-201ENST00000261707 GZMMP51124 257 aa9.37□□□□□ -0.91
SLC6A4-201ENST00000261707 MGAT2Q10469 447 aa9.37□□□□□ -0.91
SLC6A4-201ENST00000261707 FLRT3Q9NZU0 649 aa9.37□□□□□ -0.91
SLC6A4-201ENST00000261707 A6NNC1 897 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 CCL2P13500 99 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 GABRG2P18507 467 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 FHITP49789 147 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 MRPS11P82912 194 aaKnown RBP9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 VSTM2AQ8TAG5 236 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 TMEM30AQ9NV96 361 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 ECSCRQ19T08 205 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 ZBTB34Q8NCN2 500 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 BEX4Q9NWD9 120 aaPredicted RBP9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 GDF9O60383 454 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 EML2O95834 649 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 NANOS3P60323 173 aaKnown RBP9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 MAP1LC3AQ9H492 121 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 NPDC1Q9NQX5 325 aaPredicted RBP9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 LOC390937A0A1W2PQ73 354 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 LDLRAD2Q5SZI1 272 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 GALNT14Q96FL9 552 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 GABRG3Q99928 467 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 LRRC61Q9BV99 259 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 OR2A4O95047 310 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 CBLN1P23435 193 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 TFPI2P48307 235 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 C1orf185Q5T7R7 199 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 MMD2Q8IY49 270 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 TAF15Q92804 592 aaKnown RBP eCLIP9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 OR2A7Q96R45 310 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 TMUB1Q9BVT8 246 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 C16orf97H3BN30 126 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 LOXL3P58215 753 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 GAB4Q2WGN9 574 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 WDYHV1Q96HA8 205 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 SPSB2Q99619 263 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 NPVFQ9HCQ7 196 aa9.36□□□□□ -0.91
SLC6A4-201ENST00000261707 C3orf80F5H4A9 247 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 SLC17A3O00476 420 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 TMPRSS2O15393 492 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 CEACAM5P06731 702 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 LIPFP07098 398 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 ASCL5Q7RTU5 278 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 KCNS1Q96KK3 526 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 PGLYRP3Q96LB9 341 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 A0A1W2PPC1 479 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 SNAI2O43623 268 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 FCGR3AP08637 254 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 ZP1P60852 638 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 MEF2CQ06413 473 aaPredicted RBP9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 RFLNBQ8N5W9 214 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 ITGBL1O95965 494 aaPredicted RBP9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 OR52M1Q8NGK5 317 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 FAM222BQ8WU58 562 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 NEU1Q99519 415 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 HIGD1AQ9Y241 93 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 KIR3DL2P43630 455 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 SPINK14Q6IE38 97 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 CXXC4Q9H2H0 198 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 MPC1Q9Y5U8 109 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 TOPAZ1Q8N9V7 1692 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 PRRT4C9JH25 899 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 H3BUT2 72 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 ISG15P05161 165 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 RNASE1P07998 156 aaKnown RBP9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 TMEM222Q9H0R3 208 aa9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 FNDC4Q9H6D8 234 aaPredicted RBP9.35□□□□□ -0.91
SLC6A4-201ENST00000261707 H0Y980 276 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 IGFBP6P24592 240 aaPredicted RBP9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 C1QL3Q5VWW1 255 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 OR6X1Q8NH79 312 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 ABHD14BQ96IU4 210 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 ELOVL5Q9NYP7 299 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 OR51B2Q9Y5P1 312 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 LINC00869P0C866 280 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 PATE4P0C8F1 98 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 GALNSP34059 522 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 YBX1P67809 324 aaKnown RBP9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 KLHDC2Q9Y2U9 406 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 IGLV3-16A0A075B6K0 115 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 PRR19A6NJB7 356 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 Q8WTZ3 238 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 SDHCQ99643 169 aaPredicted RBP9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 A0A087WWC5 75 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 MPDU1O75352 247 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 CD8AP01732 235 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 PRSS8Q16651 343 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 SNAI3Q3KNW1 292 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 ATG4DQ86TL0 474 aaPredicted RBP9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 SLC25A38Q96DW6 304 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 DSPPQ9NZW4 1301 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 ZNF815PA8K554 130 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 CT62P0C5K7 136 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 ARL14EPLP0DKL9 152 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 PNLIPP16233 465 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms