RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 SIRPB1O00241 398 aa10.79□□□□□ -0.68
FOXN3-201ENST00000261302 IGKV1D-33P01593 117 aa10.79□□□□□ -0.68
FOXN3-201ENST00000261302 IGKV1-33P01594 117 aa10.79□□□□□ -0.68
FOXN3-201ENST00000261302 DUSP3P51452 185 aaPredicted RBP10.79□□□□□ -0.68
FOXN3-201ENST00000261302 GFRA1P56159 465 aa10.79□□□□□ -0.68
FOXN3-201ENST00000261302 HERV-K104P61576 105 aa10.79□□□□□ -0.68
FOXN3-201ENST00000261302 OR10J3Q5JRS4 329 aa10.79□□□□□ -0.68
FOXN3-201ENST00000261302 STUMQ69YW2 141 aa10.79□□□□□ -0.68
FOXN3-201ENST00000261302 PET117Q6UWS5 81 aa10.79□□□□□ -0.68
FOXN3-201ENST00000261302 DOK3Q7L591 496 aa10.79□□□□□ -0.68
FOXN3-201ENST00000261302 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.79□□□□□ -0.68
FOXN3-201ENST00000261302 FER1L6-AS1Q8NA97 138 aa10.79□□□□□ -0.68
FOXN3-201ENST00000261302 OR8B12Q8NGG6 310 aa10.79□□□□□ -0.68
FOXN3-201ENST00000261302 TIMM29Q9BSF4 260 aa10.79□□□□□ -0.68
FOXN3-201ENST00000261302 RTN4RQ9BZR6 473 aa10.79□□□□□ -0.68
FOXN3-201ENST00000261302 WDR61Q9GZS3 305 aaKnown RBP10.79□□□□□ -0.68
FOXN3-201ENST00000261302 CTXND1A0A1B0GTU2 59 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 A0A1W2PS18 150 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 GJE1A6NN92 205 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 C1QTNF9P0C862 333 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 P2RY2P41231 377 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 PSG4Q00888 419 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 WDR73Q6P4I2 378 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 GATAD1Q8WUU5 269 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 C11orf40Q8WZ69 217 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 TIMM9Q9Y5J7 89 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 TRBV9A0A0B4J1U6 114 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 IGKV1D-43A0A0B4J1Z2 117 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 PRR19A6NJB7 356 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 H3BP45 60 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 CDIPTO14735 213 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 IGLV3-19P01714 112 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 IGLC1P0CG04 106 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 MLF1P58340 268 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 RHOBP62745 196 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 PSG9Q00887 426 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 HLA-DRB5Q30154 266 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 TBC1D26Q86UD7 250 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 HAPLN4Q86UW8 402 aa10.78□□□□□ -0.68
FOXN3-201ENST00000261302 A0A1B0GV72 72 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 ZNF324O75467 553 aaPredicted RBP10.77□□□□□ -0.69
FOXN3-201ENST00000261302 PPIAL4GP0DN37 164 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 ANOS1P23352 680 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 PLA2G5P39877 138 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 C16orf52Q8NHV5 167 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 KCNK17Q96T54 332 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 LHFPL6Q9Y693 200 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 MDFIC2A0A1B0GVS7 189 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 KIAA1324LA8MWY0 1029 aaPredicted RBP10.77□□□□□ -0.69
FOXN3-201ENST00000261302 TNFSF14O43557 240 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 PAGE4O60829 102 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 NXPH3O95157 252 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 PPYP01298 95 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 ZNF83P51522 516 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 ARL16Q0P5N6 197 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 HIST3H3Q16695 136 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 MPV17L2Q567V2 206 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 ZNF776Q68DI1 518 aaPredicted RBP10.77□□□□□ -0.69
FOXN3-201ENST00000261302 FAM180AQ6UWF9 173 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 ADIPOR1Q96A54 375 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 CCDC3Q9BQI4 270 aa10.77□□□□□ -0.69
FOXN3-201ENST00000261302 H0YJW9 148 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 FCN1O00602 326 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 CA2P00918 260 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 ZNF121P58317 390 aaPredicted RBP10.76□□□□□ -0.69
FOXN3-201ENST00000261302 SCGB2A2Q13296 93 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 BVES-AS1Q5T3Y7 98 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 FLVCR1-AS1Q8TAF5 88 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 SFXN3Q9BWM7 321 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 IGHV1OR15-9A0A0B4J2B8 117 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 C22orf46C9J442 243 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 DEGS1O15121 323 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 PDE6DO43924 150 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 HLA-DOBP13765 273 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 IGLL1P15814 213 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 OTX1P32242 354 aaPredicted RBP10.76□□□□□ -0.69
FOXN3-201ENST00000261302 OR1D5P58170 312 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 HBG1P69891 147 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 HBG2P69892 147 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 ZNF90Q03938 601 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 KRTCAP3Q53RY4 240 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 ATOH7Q8N100 152 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 TAF15Q92804 592 aaKnown RBP eCLIP10.76□□□□□ -0.692e-6■■□□□ 11.9
FOXN3-201ENST00000261302 NAT6Q93015 286 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 ZNF501Q96CX3 271 aaPredicted RBP10.76□□□□□ -0.69
FOXN3-201ENST00000261302 PSG11Q9UQ72 335 aa10.76□□□□□ -0.69
FOXN3-201ENST00000261302 SHANK1Q9Y566 2161 aa10.75□□□□□ -0.69
FOXN3-201ENST00000261302 C11orf94C9JXX5 98 aa10.75□□□□□ -0.69
FOXN3-201ENST00000261302 G3V3Y1 287 aa10.75□□□□□ -0.69
FOXN3-201ENST00000261302 SLC25A6P12236 298 aa10.75□□□□□ -0.69
FOXN3-201ENST00000261302 PMCHP20382 165 aa10.75□□□□□ -0.69
FOXN3-201ENST00000261302 SRD5A2P31213 254 aa10.75□□□□□ -0.69
FOXN3-201ENST00000261302 GNB1P62873 340 aa10.75□□□□□ -0.69
FOXN3-201ENST00000261302 OR10P1Q8NGE3 313 aa10.75□□□□□ -0.69
FOXN3-201ENST00000261302 RLN3Q8WXF3 142 aa10.75□□□□□ -0.69
FOXN3-201ENST00000261302 GNB1LQ9BYB4 327 aa10.75□□□□□ -0.69
FOXN3-201ENST00000261302 SLC25A22Q9H936 323 aa10.75□□□□□ -0.69
FOXN3-201ENST00000261302 CLEC5AQ9NY25 188 aa10.75□□□□□ -0.69
FOXN3-201ENST00000261302 IL36BQ9NZH7 164 aa10.75□□□□□ -0.69
FOXN3-201ENST00000261302 TMEM131Q92545 1883 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms