RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 LRRC3CA6NJW4 275 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 C17orf112F2Z3M2 114 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 ST8SIA5O15466 376 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 SPINT2O43291 252 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 AGFG2O95081 481 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 TNFSF15O95150 251 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 OPN1MWP04001 364 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 CD55P08174 381 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 OPN1MW2P0DN77 364 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 OPN1MW3P0DN78 364 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 GPR12P47775 334 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 GLIPR1P48060 266 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 ID3Q02535 119 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 PNRC1Q12796 327 aaPredicted RBP4.04□□□□□ -1.76
USP44-201ENST00000258499 HERPUD1Q15011 391 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 ELOBQ15370 118 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 ZNF506Q5JVG8 444 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 FAM78BQ5VT40 261 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 C20orf204Q6ZNR8 217 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 C16orf82Q7Z2V1 217 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 SLC25A40Q8TBP6 338 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 DTD1Q8TEA8 209 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 TAF15Q92804 592 aaKnown RBP eCLIP4.04□□□□□ -1.76
USP44-201ENST00000258499 TMEM56Q96MV1 263 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 C1QTNF5Q9BXJ0 243 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 GPR87Q9BY21 358 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 SAMD10Q9BYL1 202 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 PLEKHA3Q9HB20 300 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 SIRT7Q9NRC8 400 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 SERTAD4Q9NUC0 356 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 CRIM1Q9NZV1 1036 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 KLF13Q9Y2Y9 288 aaPredicted RBP4.04□□□□□ -1.76
USP44-201ENST00000258499 TMEM56-RWDD3S4R434 201 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 USF3Q68DE3 2245 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 DENND4AQ7Z401 1863 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 FOXI3A8MTJ6 420 aaPredicted RBP4.04□□□□□ -1.76
USP44-201ENST00000258499 M0R1X1 148 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 DVL1O14640 695 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 SPINK4O60575 86 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 HIST1H2BKO60814 126 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 HAND1O96004 215 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 CYB5R3P00387 301 aaPredicted RBP4.04□□□□□ -1.76
USP44-201ENST00000258499 HIST1H2BJP06899 126 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 FOLR2P14207 255 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 HIST1H2BOP23527 126 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 HIST1H2BBP33778 126 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 FAM3BP58499 235 aaPredicted RBP4.04□□□□□ -1.76
USP44-201ENST00000258499 HIST1H2BDP58876 126 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 HIST1H2BCP62807 126 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 MEF2BQ02080 365 aaPredicted RBP4.04□□□□□ -1.76
USP44-201ENST00000258499 HIST2H2BEQ16778 126 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 PYY3Q5JQD4 70 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.04□□□□□ -1.76
USP44-201ENST00000258499 TIPARPQ7Z3E1 657 aaKnown RBP4.04□□□□□ -1.76
USP44-201ENST00000258499 DRAM1Q8N682 238 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 SSC4DQ8WTU2 575 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 HIST1H2BHQ93079 126 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 LURAP1Q96LR2 239 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 TAAR9Q96RI9 348 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 HIST1H2BNQ99877 126 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 HIST1H2BMQ99879 126 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 PCGF1Q9BSM1 259 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 NAT8Q9UHE5 227 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 CFAP54Q96N23 3096 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 TRAV24A0A0B4J272 114 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 LOC102723971A0A1B0GUV8 181 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 DUXBA0A1W2PPF3 345 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 C11orf94C9JXX5 98 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 WNT9BO14905 357 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 ACTL6BO94805 426 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 PTBP3O95758 552 aaKnown RBP4.03□□□□□ -1.76
USP44-201ENST00000258499 HOXA5P20719 270 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 CDC34P49427 236 aaPredicted RBP4.03□□□□□ -1.76
USP44-201ENST00000258499 HIST1H3AP68431 136 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 DCAF10Q5QP82 559 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 ATP1A1-AS1Q5TC04 95 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 SPSB3Q6PJ21 355 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 Q6ZRM9 215 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 SSMEM1Q8WWF3 244 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 FER1L6-AS2Q96M78 137 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 HIPK2Q9H2X6 1198 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 IL36GQ9NZH8 169 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 IL17BQ9UHF5 180 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 ZNF318Q5VUA4 2279 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 IGKV1-6A0A0C4DH72 117 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 ZG16O60844 167 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 IGLV3-1P01715 115 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 CELA3BP08861 270 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 KITLGP21583 273 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 HOXA4Q00056 320 aaPredicted RBP4.03□□□□□ -1.76
USP44-201ENST00000258499 Q0VFX4 171 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 RNPS1Q15287 305 aaKnown RBP4.03□□□□□ -1.76
USP44-201ENST00000258499 ACOT6Q3I5F7 207 aaPredicted RBP4.03□□□□□ -1.76
USP44-201ENST00000258499 NMSQ5H8A3 153 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 TMEM42Q69YG0 159 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 ZNF705AQ6ZN79 300 aaPredicted RBP4.03□□□□□ -1.76
USP44-201ENST00000258499 MOB1BQ7L9L4 216 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 TMEM105Q8N8V8 129 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 SCCPDHQ8NBX0 429 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 ZDHHC16Q969W1 377 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms