RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 ASCL1P50553 236 aa9.68□□□□□ -0.86
PDE6B-201ENST00000255622 ERVS71-1P61550 626 aa9.68□□□□□ -0.86
PDE6B-201ENST00000255622 MIDNQ504T8 468 aa9.68□□□□□ -0.86
PDE6B-201ENST00000255622 CALHM1Q8IU99 346 aa9.68□□□□□ -0.86
PDE6B-201ENST00000255622 SAXO1Q8IYX7 474 aa9.68□□□□□ -0.86
PDE6B-201ENST00000255622 PIGCQ92535 297 aa9.68□□□□□ -0.86
PDE6B-201ENST00000255622 VAMP8Q9BV40 100 aa9.68□□□□□ -0.86
PDE6B-201ENST00000255622 ST3GAL6Q9Y274 331 aa9.68□□□□□ -0.86
PDE6B-201ENST00000255622 PCSK5Q92824 1860 aa9.68□□□□□ -0.86
PDE6B-201ENST00000255622 OR6C6A6NF89 314 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 LRRC3CA6NJW4 275 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 NTN3O00634 580 aaPredicted RBP9.67□□□□□ -0.86
PDE6B-201ENST00000255622 P04436 131 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 ZNF728P0DKX0 622 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 CCNOP22674 350 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 FAM3AP98173 230 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 ZFP36L1Q07352 338 aaKnown RBP9.67□□□□□ -0.86
PDE6B-201ENST00000255622 CLEC12BQ2HXU8 276 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 Q6ZN92 141 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 BHLHA15Q7RTS1 189 aaPredicted RBP9.67□□□□□ -0.86
PDE6B-201ENST00000255622 MRPL52Q86TS9 123 aaKnown RBP9.67□□□□□ -0.86
PDE6B-201ENST00000255622 NIT1Q86X76 327 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 RTN4IP1Q8WWV3 396 aaPredicted RBP9.67□□□□□ -0.86
PDE6B-201ENST00000255622 C10orf35Q96D05 121 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 MS4A10Q96PG2 267 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 FOXB1Q99853 325 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 NECAP2Q9NVZ3 263 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 P4HTMQ9NXG6 502 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 TRAV30A0A087WSZ9 112 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 IGHV2OR16-5A0A0B4J2B6 119 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 KLRC4-KLRK1H3BQV0 150 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 CCL2P13500 99 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 NPBWR2P48146 333 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 ABCA11PQ4W5N1 156 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 OR2H1Q9GZK4 316 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 MTCH1Q9NZJ7 389 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 TUBD1Q9UJT1 453 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 SLC45A2Q9UMX9 530 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 FREM1Q5H8C1 2179 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 CFAP47Q6ZTR5 3102 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 FAM157AC9JC47 383 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 RAMP3O60896 148 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 AZU1P20160 251 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 HNRNPA3P51991 378 aaKnown RBP9.67□□□□□ -0.86
PDE6B-201ENST00000255622 COL10A1Q03692 680 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 DAZAP2Q15038 168 aaPredicted RBP9.67□□□□□ -0.86
PDE6B-201ENST00000255622 P2RY6Q15077 328 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 LPAL2Q16609 132 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 PLCXD3Q63HM9 321 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 ZNF66Q6ZN08 573 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 PPP1R32Q7Z5V6 425 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 OSR2Q8N2R0 312 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 GPHA2Q96T91 129 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 DECR2Q9NUI1 292 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 CRIM1Q9NZV1 1036 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 LAMTOR2Q9Y2Q5 125 aa9.67□□□□□ -0.86
PDE6B-201ENST00000255622 RNF212BA8MTL3 300 aa9.66□□□□□ -0.86
PDE6B-201ENST00000255622 SRD5A2P31213 254 aa9.66□□□□□ -0.86
PDE6B-201ENST00000255622 TMEM187Q14656 261 aa9.66□□□□□ -0.86
PDE6B-201ENST00000255622 TUSC5Q8IXB3 177 aa9.66□□□□□ -0.86
PDE6B-201ENST00000255622 H1FOOQ8IZA3 346 aaPredicted RBP9.66□□□□□ -0.86
PDE6B-201ENST00000255622 C5orf30Q96GV9 206 aa9.66□□□□□ -0.86
PDE6B-201ENST00000255622 NAA60Q9H7X0 242 aa9.66□□□□□ -0.86
PDE6B-201ENST00000255622 hCG_38984A0A1B0GV85 526 aa9.66□□□□□ -0.86
PDE6B-201ENST00000255622 GAGE12BA1L429 117 aa9.66□□□□□ -0.86
PDE6B-201ENST00000255622 GNRHRP30968 328 aa9.66□□□□□ -0.86
PDE6B-201ENST00000255622 A0A096LPE4 126 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 TRAV39A0A0B4J263 110 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 A0A1W2PPZ6 126 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 CLEC18AA5D8T8 446 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 C3orf80F5H4A9 247 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 TOMM40O96008 361 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 PRH1P02810 166 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 CRYGCP07315 174 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 GDF1P27539 372 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 SULT1A2P50226 295 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 SRYQ05066 204 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 SPINK14Q6IE38 97 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 CLEC18CQ8NCF0 446 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 OR4X1Q8NH49 305 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 HS3ST6Q96QI5 342 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 SLC35B3Q9H1N7 401 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 PROB1E7EW31 1015 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 TAAR5O14804 337 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 MMP23AO75900 390 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 C1QL1O75973 258 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 OR7C1O76099 320 aaPredicted RBP9.65□□□□□ -0.86
PDE6B-201ENST00000255622 SERPINA7P05543 415 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 TCN2P20062 427 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 MAS1LP35410 378 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 DLK1P80370 383 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 TMEM183BQ1AE95 376 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 TMEM42Q69YG0 159 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 ZNF880Q6PDB4 577 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 BTNL8Q6UX41 500 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 OR4S2Q8NH73 311 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 VN1R17PQ8TDU5 208 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 DPF1Q92782 380 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 SH3BGRL3Q9H299 93 aa9.65□□□□□ -0.86
PDE6B-201ENST00000255622 GPR35Q9HC97 309 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms