RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 LYNX1P0DP58 116 aa15.7■□□□□ 0.1
TRIM47-201ENST00000254816 HKR1P10072 659 aa15.7■□□□□ 0.1
TRIM47-201ENST00000254816 RPL7L1Q6DKI1 246 aaKnown RBP15.7■□□□□ 0.1
TRIM47-201ENST00000254816 LHFPL5Q8TAF8 219 aa15.7■□□□□ 0.1
TRIM47-201ENST00000254816 PPIAL4AQ9Y536 164 aa15.7■□□□□ 0.1
TRIM47-201ENST00000254816 IGLV2-14P01704 120 aa15.69■□□□□ 0.1
TRIM47-201ENST00000254816 PPP1CCP36873 323 aaKnown RBP15.69■□□□□ 0.1
TRIM47-201ENST00000254816 DEFA5Q01523 94 aa15.69■□□□□ 0.1
TRIM47-201ENST00000254816 MEX3BQ6ZN04 569 aaKnown RBP15.69■□□□□ 0.1
TRIM47-201ENST00000254816 LYZL2Q7Z4W2 148 aa15.69■□□□□ 0.1
TRIM47-201ENST00000254816 MARC2Q969Z3 335 aa15.69■□□□□ 0.1
TRIM47-201ENST00000254816 MSI2Q96DH6 328 aaKnown RBP15.69■□□□□ 0.1
TRIM47-201ENST00000254816 KCNS2Q9ULS6 477 aa15.69■□□□□ 0.1
TRIM47-201ENST00000254816 AGAP20933 346 aa15.69■□□□□ 0.1
TRIM47-201ENST00000254816 LIAT1Q6ZQX7 453 aa15.69■□□□□ 0.1
TRIM47-201ENST00000254816 C1orf87Q8N0U7 546 aa15.69■□□□□ 0.1
TRIM47-201ENST00000254816 SUCNR1Q9BXA5 334 aa15.69■□□□□ 0.1
TRIM47-201ENST00000254816 RNF150Q9ULK6 438 aa15.69■□□□□ 0.1
TRIM47-201ENST00000254816 TRAV38-1A0A0B4J264 116 aa15.68■□□□□ 0.1
TRIM47-201ENST00000254816 IGHV1-69-2A0A0G2JMI3 117 aa15.68■□□□□ 0.1
TRIM47-201ENST00000254816 PGLYRP1O75594 196 aaPredicted RBP15.68■□□□□ 0.1
TRIM47-201ENST00000254816 OMGP23515 440 aa15.68■□□□□ 0.1
TRIM47-201ENST00000254816 RND3P61587 244 aa15.68■□□□□ 0.1
TRIM47-201ENST00000254816 CMTM1Q8IZ96 169 aa15.68■□□□□ 0.1
TRIM47-201ENST00000254816 FAM185AQ8N0U4 392 aa15.68■□□□□ 0.1
TRIM47-201ENST00000254816 OR5D13Q8NGL4 314 aa15.68■□□□□ 0.1
TRIM47-201ENST00000254816 RNF141Q8WVD5 230 aa15.68■□□□□ 0.1
TRIM47-201ENST00000254816 A0A1W2PPR1 153 aa15.68■□□□□ 0.1
TRIM47-201ENST00000254816 DEDDO75618 318 aa15.68■□□□□ 0.1
TRIM47-201ENST00000254816 RPL12P30050 165 aaKnown RBP15.68■□□□□ 0.1
TRIM47-201ENST00000254816 CLEC9AQ6UXN8 241 aa15.68■□□□□ 0.1
TRIM47-201ENST00000254816 SMIM3Q9BZL3 60 aa15.68■□□□□ 0.1
TRIM47-201ENST00000254816 ZNF705EA8MWA4 302 aaPredicted RBP15.67■□□□□ 0.1
TRIM47-201ENST00000254816 K7EPK0 472 aa15.67■□□□□ 0.1
TRIM47-201ENST00000254816 SPINT2O43291 252 aa15.67■□□□□ 0.1
TRIM47-201ENST00000254816 FAM157CP0CG43 387 aa15.67■□□□□ 0.1
TRIM47-201ENST00000254816 COL8A2P25067 703 aa15.67■□□□□ 0.1
TRIM47-201ENST00000254816 SRSF3P84103 164 aaKnown RBP15.67■□□□□ 0.1
TRIM47-201ENST00000254816 SMCO1Q147U7 214 aa15.67■□□□□ 0.1
TRIM47-201ENST00000254816 LYPD2Q6UXB3 125 aa15.67■□□□□ 0.1
TRIM47-201ENST00000254816 FAM71E2Q8N5Q1 922 aa15.67■□□□□ 0.1
TRIM47-201ENST00000254816 NINJ1Q92982 152 aa15.67■□□□□ 0.1
TRIM47-201ENST00000254816 UBE2J1Q9Y385 318 aaPredicted RBP15.67■□□□□ 0.1
TRIM47-201ENST00000254816 MBPP02686 304 aaPredicted RBP15.66■□□□□ 0.1
TRIM47-201ENST00000254816 OR51H1Q8NH63 302 aa15.66■□□□□ 0.1
TRIM47-201ENST00000254816 C14orf79Q96F83 325 aa15.66■□□□□ 0.1
TRIM47-201ENST00000254816 C18orf12Q96KH6 178 aa15.66■□□□□ 0.1
TRIM47-201ENST00000254816 ZFYVE26Q68DK2 2539 aa15.66■□□□□ 0.1
TRIM47-201ENST00000254816 NKX6-3A6NJ46 265 aa15.66■□□□□ 0.1
TRIM47-201ENST00000254816 FCN3O75636 299 aa15.66■□□□□ 0.1
TRIM47-201ENST00000254816 NDUFB7P17568 137 aa15.66■□□□□ 0.1
TRIM47-201ENST00000254816 ATF4P18848 351 aaPredicted RBP15.66■□□□□ 0.1
TRIM47-201ENST00000254816 GZMHP20718 246 aa15.66■□□□□ 0.1
TRIM47-201ENST00000254816 TRAT1Q6PIZ9 186 aa15.66■□□□□ 0.1
TRIM47-201ENST00000254816 LGI3Q8N145 548 aa15.66■□□□□ 0.1
TRIM47-201ENST00000254816 TMEM222Q9H0R3 208 aa15.66■□□□□ 0.1
TRIM47-201ENST00000254816 FBXL17Q9UF56 701 aa15.66■□□□□ 0.1
TRIM47-201ENST00000254816 IGHV3-7P01780 117 aa15.65■□□□□ 0.1
TRIM47-201ENST00000254816 SOD3P08294 240 aa15.65■□□□□ 0.1
TRIM47-201ENST00000254816 TAGLNQ01995 201 aaKnown RBP15.65■□□□□ 0.1
TRIM47-201ENST00000254816 CR1LQ2VPA4 569 aa15.65■□□□□ 0.1
TRIM47-201ENST00000254816 TMEM268Q5VZI3 342 aa15.65■□□□□ 0.1
TRIM47-201ENST00000254816 SLC35G3Q8N808 338 aa15.65■□□□□ 0.1
TRIM47-201ENST00000254816 OR2D2Q9H210 308 aa15.65■□□□□ 0.1
TRIM47-201ENST00000254816 LY6HO94772 140 aa15.65■□□□□ 0.1
TRIM47-201ENST00000254816 HFEQ30201 348 aa15.65■□□□□ 0.1
TRIM47-201ENST00000254816 TCF23Q7RTU1 214 aa15.65■□□□□ 0.1
TRIM47-201ENST00000254816 DRAM1Q8N682 238 aa15.65■□□□□ 0.1
TRIM47-201ENST00000254816 LRTM2Q8N967 370 aa15.65■□□□□ 0.1
TRIM47-201ENST00000254816 OR52M1Q8NGK5 317 aa15.65■□□□□ 0.1
TRIM47-201ENST00000254816 BSCL2Q96G97 398 aaPredicted RBP15.65■□□□□ 0.1
TRIM47-201ENST00000254816 FAM234AQ9H0X4 552 aa15.65■□□□□ 0.1
TRIM47-201ENST00000254816 TMEM231Q9H6L2 316 aa15.65■□□□□ 0.1
TRIM47-201ENST00000254816 CALYQ9NYX4 217 aa15.65■□□□□ 0.1
TRIM47-201ENST00000254816 OR6C3Q9NZP0 311 aa15.65■□□□□ 0.1
TRIM47-201ENST00000254816 PPOXP50336 477 aa15.64■□□□□ 0.09
TRIM47-201ENST00000254816 ZNF273Q14593 569 aa15.64■□□□□ 0.09
TRIM47-201ENST00000254816 C17orf58Q2M2W7 97 aa15.64■□□□□ 0.09
TRIM47-201ENST00000254816 SMUG1Q53HV7 270 aa15.64■□□□□ 0.09
TRIM47-201ENST00000254816 UTF1Q5T230 341 aa15.64■□□□□ 0.09
TRIM47-201ENST00000254816 CBLN4Q9NTU7 201 aa15.64■□□□□ 0.09
TRIM47-201ENST00000254816 SLC25A10Q9UBX3 287 aaPredicted RBP15.64■□□□□ 0.09
TRIM47-201ENST00000254816 LPAR3Q9UBY5 353 aa15.64■□□□□ 0.09
TRIM47-201ENST00000254816 RAB19A4D1S5 217 aa15.64■□□□□ 0.09
TRIM47-201ENST00000254816 ADAM20O43506 726 aa15.64■□□□□ 0.09
TRIM47-201ENST00000254816 FBXO24O75426 580 aa15.64■□□□□ 0.09
TRIM47-201ENST00000254816 F2RP25116 425 aa15.64■□□□□ 0.09
TRIM47-201ENST00000254816 TMEM33P57088 247 aa15.64■□□□□ 0.09
TRIM47-201ENST00000254816 HTD2P86397 168 aa15.64■□□□□ 0.09
TRIM47-201ENST00000254816 C5orf30Q96GV9 206 aa15.64■□□□□ 0.09
TRIM47-201ENST00000254816 HRH4Q9H3N8 390 aa15.64■□□□□ 0.09
TRIM47-201ENST00000254816 TNFRSF13BO14836 293 aaPredicted RBP15.63■□□□□ 0.09
TRIM47-201ENST00000254816 ST8SIA5O15466 376 aa15.63■□□□□ 0.09
TRIM47-201ENST00000254816 CGB3P0DN86 165 aa15.63■□□□□ 0.09
TRIM47-201ENST00000254816 CGB7P0DN87 165 aa15.63■□□□□ 0.09
TRIM47-201ENST00000254816 ZNF16P17020 682 aaPredicted RBP15.63■□□□□ 0.09
TRIM47-201ENST00000254816 C11orf71Q6IPW1 123 aa15.63■□□□□ 0.09
TRIM47-201ENST00000254816 UQCC3Q6UW78 93 aa15.63■□□□□ 0.09
TRIM47-201ENST00000254816 SELENOHQ8IZQ5 122 aaKnown RBP15.63■□□□□ 0.09
TRIM47-201ENST00000254816 ABHD14BQ96IU4 210 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms