RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ZNF718Q3SXZ3 478 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 DPPA3Q6W0C5 159 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 SEM1Q6ZVN7 128 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 VSIRQ9H7M9 311 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 MMP24Q9Y5R2 645 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 SSTR5P35346 364 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 RPL35P42766 123 aaKnown RBP16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 BRWD1-AS2P59051 145 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 SPANXN5Q5MJ07 72 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 CLDND2Q8NHS1 167 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 A0A1W2PPE2 198 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 AHRRA9YTQ3 701 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 SCAF4O95104 1147 aaKnown RBP16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 MT-ND4LP03901 98 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 GCH1P30793 250 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 G6PCP35575 357 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 UBE2KP61086 200 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 ZNF816Q0VGE8 651 aaPredicted RBP16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 KRBOX4Q5JUW0 171 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 MBNL2Q5VZF2 373 aaKnown RBP16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 ZBTB34Q8NCN2 500 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 OR13A1Q8NGR1 328 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 TOLLIPQ9H0E2 274 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 RPRMQ9NS64 109 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 COA4Q9NYJ1 87 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 PROCRQ9UNN8 238 aa16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 CNOT1A5YKK6 2376 aaKnown RBP16.36■□□□□ 0.21
CDC42EP1-201ENST00000249014 KRASP01116 189 aa16.35■□□□□ 0.21
CDC42EP1-201ENST00000249014 P0C879 139 aa16.35■□□□□ 0.21
CDC42EP1-201ENST00000249014 PTAFRP25105 342 aa16.35■□□□□ 0.21
CDC42EP1-201ENST00000249014 HOXA1P49639 335 aaPredicted RBP16.35■□□□□ 0.21
CDC42EP1-201ENST00000249014 AKR1D1P51857 326 aa16.35■□□□□ 0.21
CDC42EP1-201ENST00000249014 ZNF506Q5JVG8 444 aa16.35■□□□□ 0.21
CDC42EP1-201ENST00000249014 BTNL3Q6UXE8 466 aa16.35■□□□□ 0.21
CDC42EP1-201ENST00000249014 SCGB1C1Q8TD33 95 aa16.35■□□□□ 0.21
CDC42EP1-201ENST00000249014 NBEAQ8NFP9 2946 aa16.35■□□□□ 0.21
CDC42EP1-201ENST00000249014 TUBG1P23258 451 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 CEBPGP53567 150 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 MSMPQ1L6U9 139 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 BHLHA15Q7RTS1 189 aaPredicted RBP16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 CD177Q8N6Q3 437 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 RBMXL1Q96E39 390 aaKnown RBP16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 RBKSQ9H477 322 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 TUBG2Q9NRH3 451 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 IGHV3-43A0A0B4J1X8 118 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 OR5H1A6NKK0 313 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 C17orf98A8MV24 154 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 CEACAM4O75871 244 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 S1PR2O95136 353 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 IGHV3-43DP0DP04 118 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 LINC00205P59089 165 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 TNFRSF9Q07011 255 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 LRRC75BQ2VPJ9 315 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 SMIM21Q3B7S5 101 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 RNF212Q495C1 297 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 LILRB2Q8N423 598 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 FAM24BQ8N5W8 94 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 CYB561D1Q8N8Q1 229 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 DCTN5Q9BTE1 182 aa16.34■□□□□ 0.21
CDC42EP1-201ENST00000249014 LAMA5O15230 3695 aa16.33■□□□□ 0.21
CDC42EP1-201ENST00000249014 FAM90A26D6RGX4 464 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 H3BQ15 152 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 IFNL4K9M1U5 179 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 PPIHO43447 177 aaKnown RBP16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 HBE1P02100 147 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 HBG1P69891 147 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 HBG2P69892 147 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 ZNF726P1Q15940 193 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 RFESDQ8TAC1 157 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 LRRC29Q8WV35 223 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 NINJ1Q92982 152 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 SLC25A15Q9Y619 301 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 ZNF318Q5VUA4 2279 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 TRAV1-1A0A0B4J248 108 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 A0A1B0GWJ7 208 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 hCG_1809904A0A1W2PP81 198 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 A0A1W2PR64 198 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 A0A1W2PRV1 198 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 HSPB1P04792 205 aaKnown RBP16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 RAB5BP61020 215 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 P2RY6Q15077 328 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 SSX7Q7RTT5 188 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 OR4C12Q96R67 309 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 HSPB7Q9UBY9 170 aa16.33■□□□□ 0.2
CDC42EP1-201ENST00000249014 EGR1P18146 543 aa16.32■□□□□ 0.2
CDC42EP1-201ENST00000249014 RPS23P62266 143 aaKnown RBP16.32■□□□□ 0.2
CDC42EP1-201ENST00000249014 LRP11Q86VZ4 500 aa16.32■□□□□ 0.2
CDC42EP1-201ENST00000249014 OR2Z1Q8NG97 314 aa16.32■□□□□ 0.2
CDC42EP1-201ENST00000249014 TCTEX1D2Q8WW35 142 aa16.32■□□□□ 0.2
CDC42EP1-201ENST00000249014 PSMG3Q9BT73 122 aaPredicted RBP16.32■□□□□ 0.2
CDC42EP1-201ENST00000249014 DOCK11Q5JSL3 2073 aa16.32■□□□□ 0.2
CDC42EP1-201ENST00000249014 ODAMA1E959 279 aa16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 MBD3L4A6NDZ8 208 aaPredicted RBP16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 MBD3L3A6NE82 208 aaPredicted RBP16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 MBD3L5A6NJ08 208 aaPredicted RBP16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 DEFB108AA8MXU0 73 aa16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 C1orf196B1AJZ1 125 aa16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 ATXN7O15265 892 aaPredicted RBP16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 CLDN1O95832 211 aa16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 RAB2AP61019 212 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms