RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 GPR157Q5UAW9 335 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 ZNF497Q6ZNH5 498 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 Q6ZRM9 215 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 RFESDQ8TAC1 157 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 SPIN2AQ99865 258 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 SPIN2BQ9BPZ2 258 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 TAAR3PQ9P1P4 343 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 TM4SF5O14894 197 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 ZNF83P51522 516 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 BPIFB3P59826 476 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 GUSBP1Q15486 140 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 SRSF7Q16629 238 aaKnown RBP eCLIP13.29□□□□□ -0.28
LRFN1-201ENST00000248668 IGFL2Q6UWQ7 119 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 ZADH2Q8N4Q0 377 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 TMEM252Q8N6L7 170 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 GPR146Q96CH1 333 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 PROCRQ9UNN8 238 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 IGHV3-43A0A0B4J1X8 118 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 H0Y980 276 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 TNFSF13O75888 250 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 IGKV3-15P01624 115 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 IGHV3-43DP0DP04 118 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 IAPPP10997 89 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 AGAP20933 346 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 S100GP29377 79 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 GABRA2P47869 451 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 TMEM267Q0VDI3 215 aaPredicted RBP13.28□□□□□ -0.28
LRFN1-201ENST00000248668 ZGRF1Q86YA3 2104 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 OR10D4PQ8NGN7 298 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 STARD4Q96DR4 205 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 CHD3Q12873 2000 aaKnown RBP13.28□□□□□ -0.28
LRFN1-201ENST00000248668 PKDREJQ9NTG1 2253 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 IGHV2-5P01817 119 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 DYNLT3P51808 116 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 TAS2R60P59551 318 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 ZNF880Q6PDB4 577 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 SEM1Q6ZVN7 128 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 LRP11Q86VZ4 500 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 OR8G5Q8NG78 346 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 MRGPRDQ8TDS7 321 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 TMPRSS5Q9H3S3 457 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 MAP1AP78559 2803 aaPredicted RBP13.28□□□□□ -0.28
LRFN1-201ENST00000248668 IGLV2-14P01704 120 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 FOLR2P14207 255 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 TCF15Q12870 199 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 OR52L2PQ8NGH6 319 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 DCTN5Q9BTE1 182 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 EIF5A2Q9GZV4 153 aaKnown RBP13.28□□□□□ -0.28
LRFN1-201ENST00000248668 CACNG5Q9UF02 275 aa13.28□□□□□ -0.28
LRFN1-201ENST00000248668 IGHV1-18A0A0C4DH31 117 aa13.27□□□□□ -0.28
LRFN1-201ENST00000248668 DEFB108AA8MXU0 73 aa13.27□□□□□ -0.28
LRFN1-201ENST00000248668 AP4M1O00189 453 aa13.27□□□□□ -0.28
LRFN1-201ENST00000248668 PPIHO43447 177 aaKnown RBP13.27□□□□□ -0.28
LRFN1-201ENST00000248668 PTBP3O95758 552 aaKnown RBP13.27□□□□□ -0.28
LRFN1-201ENST00000248668 IGKV1-39P01597 117 aa13.27□□□□□ -0.28
LRFN1-201ENST00000248668 IGKV1D-39P04432 117 aa13.27□□□□□ -0.28
LRFN1-201ENST00000248668 COX5AP20674 150 aa13.27□□□□□ -0.28
LRFN1-201ENST00000248668 GCH1P30793 250 aa13.27□□□□□ -0.28
LRFN1-201ENST00000248668 EDDM3AQ14507 147 aa13.27□□□□□ -0.28
LRFN1-201ENST00000248668 HNF4GQ14541 408 aa13.27□□□□□ -0.28
LRFN1-201ENST00000248668 C11orf53Q8IXP5 236 aa13.27□□□□□ -0.28
LRFN1-201ENST00000248668 Q8IYB0 196 aa13.27□□□□□ -0.28
LRFN1-201ENST00000248668 C15orf54Q8N8G6 183 aa13.27□□□□□ -0.28
LRFN1-201ENST00000248668 OR5D13Q8NGL4 314 aa13.27□□□□□ -0.28
LRFN1-201ENST00000248668 PARP11Q9NR21 331 aa13.27□□□□□ -0.28
LRFN1-201ENST00000248668 CBY1Q9Y3M2 126 aa13.27□□□□□ -0.28
LRFN1-201ENST00000248668 LINC00205P59089 165 aa13.27□□□□□ -0.29
LRFN1-201ENST00000248668 OR2Z1Q8NG97 314 aa13.27□□□□□ -0.29
LRFN1-201ENST00000248668 CABLES2Q9BTV7 478 aa13.27□□□□□ -0.29
LRFN1-201ENST00000248668 BSNQ9UPA5 3926 aa13.27□□□□□ -0.29
LRFN1-201ENST00000248668 PTPRBP23467 1997 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 ZNF891A8MT65 544 aaPredicted RBP13.26□□□□□ -0.29
LRFN1-201ENST00000248668 KLK10O43240 276 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 SNRPCP09234 159 aaKnown RBP13.26□□□□□ -0.29
LRFN1-201ENST00000248668 ATP6V0CP27449 155 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 PPP1CCP36873 323 aaKnown RBP13.26□□□□□ -0.29
LRFN1-201ENST00000248668 OR2G3Q8NGZ4 309 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 TRBV6-6A0A0A6YYG2 114 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 IGHV2OR16-5A0A0B4J2B6 119 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 IGHV3-13P01766 116 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 IGHV3-7P01780 117 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 DANCRP0C864 163 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 SPCS3P61009 180 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 GAMTQ14353 236 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 ZNF146Q15072 292 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 BTNL3Q6UXE8 466 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 ODF3L1Q8IXM7 274 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 GINS3Q9BRX5 216 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 PLEKHF2Q9H8W4 249 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 C19orf12Q9NSK7 152 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 LYRM2Q9NU23 88 aaPredicted RBP13.26□□□□□ -0.29
LRFN1-201ENST00000248668 FBXO7Q9Y3I1 522 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 RAB5AP20339 215 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 SSTR5P35346 364 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 MSMPQ1L6U9 139 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 AWAT1Q58HT5 328 aa13.26□□□□□ -0.29
LRFN1-201ENST00000248668 BHLHA15Q7RTS1 189 aaPredicted RBP13.26□□□□□ -0.29
LRFN1-201ENST00000248668 ZNF71Q9NQZ8 489 aaPredicted RBP13.26□□□□□ -0.29
LRFN1-201ENST00000248668 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.25□□□□□ -0.29
LRFN1-201ENST00000248668 A0A1W2PPE2 198 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms