RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 RBKSQ9H477 322 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 APELAP0DMC3 54 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 OR8A1Q8NGG7 326 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 PARD6GQ9BYG4 376 aaPredicted RBP17.16■□□□□ 0.34
SOX4-201ENST00000244745 PDCD11Q14690 1871 aaKnown RBP17.15■□□□□ 0.34
SOX4-201ENST00000244745 K7ERU9 68 aa17.15■□□□□ 0.34
SOX4-201ENST00000244745 PGLYRP1O75594 196 aaPredicted RBP17.15■□□□□ 0.34
SOX4-201ENST00000244745 NPY1RP25929 384 aa17.15■□□□□ 0.34
SOX4-201ENST00000244745 OR4X1Q8NH49 305 aa17.15■□□□□ 0.34
SOX4-201ENST00000244745 PRNDQ9UKY0 176 aa17.15■□□□□ 0.34
SOX4-201ENST00000244745 LNP1A1A4G5 178 aa17.15■□□□□ 0.34
SOX4-201ENST00000244745 OR51B2Q9Y5P1 312 aa17.15■□□□□ 0.34
SOX4-201ENST00000244745 NDUFB4O95168 129 aa17.15■□□□□ 0.34
SOX4-201ENST00000244745 PRSS1P07477 247 aa17.15■□□□□ 0.34
SOX4-201ENST00000244745 CD1BP29016 333 aa17.15■□□□□ 0.34
SOX4-201ENST00000244745 APOBEC4Q8WW27 367 aaKnown RBP17.15■□□□□ 0.34
SOX4-201ENST00000244745 AMMECR1Q9Y4X0 333 aaPredicted RBP17.15■□□□□ 0.34
SOX4-201ENST00000244745 TRAV38-1A0A0B4J264 116 aa17.15■□□□□ 0.34
SOX4-201ENST00000244745 ISLRO14498 428 aa17.15■□□□□ 0.34
SOX4-201ENST00000244745 CA11O75493 328 aa17.15■□□□□ 0.34
SOX4-201ENST00000244745 IER2Q9BTL4 223 aa17.15■□□□□ 0.34
SOX4-201ENST00000244745 CLEC5AQ9NY25 188 aa17.15■□□□□ 0.34
SOX4-201ENST00000244745 RNF224P0DH78 156 aa17.14■□□□□ 0.34
SOX4-201ENST00000244745 FDX2Q6P4F2 183 aa17.14■□□□□ 0.34
SOX4-201ENST00000244745 POC1AQ8NBT0 407 aa17.14■□□□□ 0.34
SOX4-201ENST00000244745 SLC35B1P78383 322 aa17.14■□□□□ 0.33
SOX4-201ENST00000244745 RNF7Q9UBF6 113 aa17.14■□□□□ 0.33
SOX4-201ENST00000244745 FAM90A27PA6NNH2 459 aa17.14■□□□□ 0.33
SOX4-201ENST00000244745 VSTM2AQ8TAG5 236 aa17.14■□□□□ 0.33
SOX4-201ENST00000244745 GPR146Q96CH1 333 aa17.14■□□□□ 0.33
SOX4-201ENST00000244745 IL36RNQ9UBH0 155 aa17.14■□□□□ 0.33
SOX4-201ENST00000244745 ZNF137PP52743 207 aa17.14■□□□□ 0.33
SOX4-201ENST00000244745 TRIP6Q15654 476 aaKnown RBP17.14■□□□□ 0.33
SOX4-201ENST00000244745 SSX8Q7RTT4 187 aa17.14■□□□□ 0.33
SOX4-201ENST00000244745 APCDD1LQ8NCL9 501 aa17.14■□□□□ 0.33
SOX4-201ENST00000244745 AICDAQ9GZX7 198 aa17.14■□□□□ 0.33
SOX4-201ENST00000244745 A0A1W2PRD5 423 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 A0A1W2PRF3 423 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 A0A1W2PRM7 423 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 IGSF23A1L1A6 192 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 OR2H2O95918 312 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 TCTAP57738 103 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 MEF2BQ02080 365 aaPredicted RBP17.13■□□□□ 0.33
SOX4-201ENST00000244745 PIPOXQ9P0Z9 390 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 CKAP5Q14008 2032 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 CD82P27701 267 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 LYRM7Q5U5X0 104 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 ASCL3Q9NQ33 180 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 BTCP35070 178 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 P2RX4Q99571 388 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 MRPL18Q9H0U6 180 aaKnown RBP17.13■□□□□ 0.33
SOX4-201ENST00000244745 KIAA0100Q14667 2235 aaKnown RBP17.13■□□□□ 0.33
SOX4-201ENST00000244745 TMEM187Q14656 261 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 ABHD14BQ96IU4 210 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 TMEM14DPA8MWL7 114 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 PRF1P14222 555 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 ZNF645Q8N7E2 425 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 HARBI1Q96MB7 349 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 UQCR10Q9UDW1 63 aa17.13■□□□□ 0.33
SOX4-201ENST00000244745 HBZP02008 142 aa17.12■□□□□ 0.33
SOX4-201ENST00000244745 Q96M66 194 aa17.12■□□□□ 0.33
SOX4-201ENST00000244745 SOSTQ9BQB4 213 aa17.12■□□□□ 0.33
SOX4-201ENST00000244745 ACP1P24666 158 aa17.12■□□□□ 0.33
SOX4-201ENST00000244745 INO80CQ6PI98 192 aaPredicted RBP17.12■□□□□ 0.33
SOX4-201ENST00000244745 PXMP4Q9Y6I8 212 aa17.12■□□□□ 0.33
SOX4-201ENST00000244745 FAM157AC9JC47 383 aa17.12■□□□□ 0.33
SOX4-201ENST00000244745 CEBPDP49716 269 aaPredicted RBP17.12■□□□□ 0.33
SOX4-201ENST00000244745 IGLV3-21P80748 117 aaPredicted RBP17.12■□□□□ 0.33
SOX4-201ENST00000244745 FOXC1Q12948 553 aa17.12■□□□□ 0.33
SOX4-201ENST00000244745 RIGQ13278 110 aa17.12■□□□□ 0.33
SOX4-201ENST00000244745 SCARF2Q96GP6 870 aaPredicted RBP17.12■□□□□ 0.33
SOX4-201ENST00000244745 UQCRFS1P47985 274 aa17.12■□□□□ 0.33
SOX4-201ENST00000244745 NR2C2APQ86WQ0 139 aa17.12■□□□□ 0.33
SOX4-201ENST00000244745 GMPPAQ96IJ6 420 aaPredicted RBP17.12■□□□□ 0.33
SOX4-201ENST00000244745 C21orf140B9A014 251 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 SOD3P08294 240 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 RND1Q92730 232 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 TMEM183AQ8IXX5 376 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 TMEM116Q8NCL8 245 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 NUDT16L1Q9BRJ7 211 aaKnown RBP17.11■□□□□ 0.33
SOX4-201ENST00000244745 SRXN1Q9BYN0 137 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 WIPI2Q9Y4P8 454 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 DHRS7CA6NNS2 312 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 DCAF10Q5QP82 559 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 CFHR5Q9BXR6 569 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 IGHV3-21A0A0B4J1V1 117 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 J3QR06 171 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 LEMD1Q68G75 181 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 GLRX5Q86SX6 157 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 FAM216AQ8WUB2 273 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 TMEM229AB2RXF0 380 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 PRDX2P32119 198 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 OR8I2Q8N0Y5 310 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 LCTP09848 1927 aa17.11■□□□□ 0.33
SOX4-201ENST00000244745 HPRT1P00492 218 aa17.1■□□□□ 0.33
SOX4-201ENST00000244745 CA2P00918 260 aa17.1■□□□□ 0.33
SOX4-201ENST00000244745 COL8A1P27658 744 aa17.1■□□□□ 0.33
SOX4-201ENST00000244745 PERPQ96FX8 193 aa17.1■□□□□ 0.33
SOX4-201ENST00000244745 ZDHHC8Q9ULC8 765 aa17.1■□□□□ 0.33
SOX4-201ENST00000244745 CORTO00230 105 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms