RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 LY6G6DO95868 133 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 IGHV4-39P01824 125 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 HKR1P10072 659 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 APOBEC3AP31941 199 aaPredicted RBP7.25□□□□□ -1.25
VPS4B-201ENST00000238497 PPP1CCP36873 323 aaKnown RBP7.25□□□□□ -1.25
VPS4B-201ENST00000238497 NAAAQ02083 359 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 DHODHQ02127 395 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 Q6ZRG5 221 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 BVESQ8NE79 360 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 MOB3AQ96BX8 217 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 SH3BGRL3Q9H299 93 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 POLDIP2Q9Y2S7 368 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 OR5B21A6NL26 309 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 DBX1A6NMT0 343 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 PSPNO60542 156 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 HAND1O96004 215 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 CST4P01036 141 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 GLAP06280 429 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 OR4A8P0C604 315 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 PVALBP20472 110 aaPredicted RBP7.24□□□□□ -1.25
VPS4B-201ENST00000238497 NFYBP25208 207 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 PMELP40967 661 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 GLIPR1P48060 266 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 RIPPLY3P57055 190 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 TMEM267Q0VDI3 215 aaPredicted RBP7.24□□□□□ -1.25
VPS4B-201ENST00000238497 FIP1L1Q6UN15 594 aaKnown RBP7.24□□□□□ -1.25
VPS4B-201ENST00000238497 DHRS11Q6UWP2 260 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 ARL11Q969Q4 196 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 ABHD14BQ96IU4 210 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 GNG12Q9UBI6 72 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 ZMAT5Q9UDW3 170 aaKnown RBP7.24□□□□□ -1.25
VPS4B-201ENST00000238497 CHST1O43916 411 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 ZNF14P17017 642 aaPredicted RBP7.24□□□□□ -1.25
VPS4B-201ENST00000238497 SSTR5P35346 364 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 FAM76BQ5HYJ3 339 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 OR8G2PQ6IF36 304 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 MOGAT3Q86VF5 341 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 KRTAP1-3Q8IUG1 177 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 ZNF525Q8N782 197 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 ZNRF1Q8ND25 227 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 TECTBQ96PL2 329 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 HINT2Q9BX68 163 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 OR51I2Q9H344 312 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 SPACA1Q9HBV2 294 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 PURGQ9UJV8 347 aaKnown RBP7.24□□□□□ -1.25
VPS4B-201ENST00000238497 FBXO7Q9Y3I1 522 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 MFSD2BA6NFX1 497 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 TSPAN15O95858 294 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 CCL8P80075 99 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 RUNX1Q01196 453 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 SURF2Q15527 256 aaPredicted RBP7.24□□□□□ -1.25
VPS4B-201ENST00000238497 SPANXN5Q5MJ07 72 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 CCDC36Q8IYA8 594 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 STOML3Q8TAV4 291 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 CD300LFQ8TDQ1 290 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 BARX1Q9HBU1 254 aaPredicted RBP7.24□□□□□ -1.25
VPS4B-201ENST00000238497 TAAR3PQ9P1P4 343 aa7.24□□□□□ -1.25
VPS4B-201ENST00000238497 COL6A5A8TX70 2615 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 BORCS7-ASMTA0A0B4J1R7 106 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 SELLP14151 372 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 FOSL1P15407 271 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 CBR1P16152 277 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 EIF5AL1Q6IS14 154 aaKnown RBP7.23□□□□□ -1.25
VPS4B-201ENST00000238497 PRSS57Q6UWY2 283 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 MRPL30Q8TCC3 161 aaKnown RBP7.23□□□□□ -1.25
VPS4B-201ENST00000238497 REG4Q9BYZ8 158 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 OR2D2Q9H210 308 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 CACNG5Q9UF02 275 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 PSG11Q9UQ72 335 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 TOR1AO14656 332 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 HMGB3O15347 200 aaKnown RBP7.23□□□□□ -1.25
VPS4B-201ENST00000238497 GPR37O15354 613 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 MLNRO43193 412 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 TXNL1O43396 289 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 PGLYRP1O75594 196 aaPredicted RBP7.23□□□□□ -1.25
VPS4B-201ENST00000238497 HEXAP06865 529 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 COX5BP10606 129 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 MPV17LQ2QL34 196 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 KRBOX4Q5JUW0 171 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 OR5C1Q8NGR4 320 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 TCTEX1D2Q8WW35 142 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 SHARPINQ9H0F6 387 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 PLK3Q9H4B4 646 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 YAE1D1Q9NRH1 226 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 GLS2Q9UI32 602 aa7.23□□□□□ -1.25
VPS4B-201ENST00000238497 E5RGE8 158 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 M0R036 132 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 ST8SIA5O15466 376 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 DEDDO75618 318 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 PTBP3O95758 552 aaKnown RBP7.22□□□□□ -1.25
VPS4B-201ENST00000238497 METTL15P1P0C7V9 234 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 RAC2P15153 192 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 MPZP25189 248 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 ECI1P42126 302 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 LPAR6P43657 344 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 COL10A1Q03692 680 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 GUCA2BQ16661 112 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 NRN1LQ496H8 165 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 FAM168AQ92567 244 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 OR2W1Q9Y3N9 320 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms