RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 BTNL3Q6UXE8 466 aa15.26■□□□□ 0.03
SNX17-201ENST00000233575 HEPN1Q6WQI6 88 aa15.26■□□□□ 0.03
SNX17-201ENST00000233575 OR5M8Q8NGP6 311 aa15.26■□□□□ 0.03
SNX17-201ENST00000233575 CT45A3Q8NHU0 189 aa15.26■□□□□ 0.03
SNX17-201ENST00000233575 COQ8AQ8NI60 647 aa15.26■□□□□ 0.03
SNX17-201ENST00000233575 EDARADDQ8WWZ3 215 aa15.26■□□□□ 0.03
SNX17-201ENST00000233575 MSI2Q96DH6 328 aaKnown RBP15.26■□□□□ 0.03
SNX17-201ENST00000233575 PSMG3-AS1Q96PY0 264 aa15.26■□□□□ 0.03
SNX17-201ENST00000233575 IFI27L2Q9H2X8 130 aa15.26■□□□□ 0.03
SNX17-201ENST00000233575 RAB9BQ9NP90 201 aa15.26■□□□□ 0.03
SNX17-201ENST00000233575 PTPN13Q12923 2485 aa15.26■□□□□ 0.03
SNX17-201ENST00000233575 POLQO75417 2590 aa15.26■□□□□ 0.03
SNX17-201ENST00000233575 PROP1O75360 226 aa15.26■□□□□ 0.03
SNX17-201ENST00000233575 ZNF439Q8NDP4 499 aa15.26■□□□□ 0.03
SNX17-201ENST00000233575 AKR1E2Q96JD6 320 aa15.26■□□□□ 0.03
SNX17-201ENST00000233575 SDHAF2Q9NX18 166 aa15.26■□□□□ 0.03
SNX17-201ENST00000233575 A0A0B4J2A0 478 aa15.25■□□□□ 0.03
SNX17-201ENST00000233575 FAM25EA8MYX2 175 aa15.25■□□□□ 0.03
SNX17-201ENST00000233575 G3V3Q6 166 aa15.25■□□□□ 0.03
SNX17-201ENST00000233575 OR2A4O95047 310 aa15.25■□□□□ 0.03
SNX17-201ENST00000233575 HOXB5P09067 269 aa15.25■□□□□ 0.03
SNX17-201ENST00000233575 PRB3Q04118 309 aaPredicted RBP15.25■□□□□ 0.03
SNX17-201ENST00000233575 C1orf229Q6ZS94 237 aaPredicted RBP15.25■□□□□ 0.03
SNX17-201ENST00000233575 SEC22AQ96IW7 307 aa15.25■□□□□ 0.03
SNX17-201ENST00000233575 OR2A7Q96R45 310 aa15.25■□□□□ 0.03
SNX17-201ENST00000233575 ABHD14AQ9BUJ0 271 aa15.25■□□□□ 0.03
SNX17-201ENST00000233575 SSBP3Q9BWW4 388 aaPredicted RBP15.25■□□□□ 0.03
SNX17-201ENST00000233575 SHPKQ9UHJ6 478 aa15.25■□□□□ 0.03
SNX17-201ENST00000233575 F2RP25116 425 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 PDLIM4P50479 330 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 RPL30P62888 115 aaKnown RBP15.24■□□□□ 0.03
SNX17-201ENST00000233575 EIF4EBP1Q13541 118 aaPredicted RBP15.24■□□□□ 0.03
SNX17-201ENST00000233575 Q3ZCU0 254 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 ZFP69Q49AA0 526 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 LIAT1Q6ZQX7 453 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 OR52M1Q8NGK5 317 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 SUCNR1Q9BXA5 334 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 ITGB1BP2Q9UKP3 347 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 GCN1Q92616 2671 aaKnown RBP15.24■□□□□ 0.03
SNX17-201ENST00000233575 PPIAL4CA0A0B4J2A2 164 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 GPR37O15354 613 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 RGS11O94810 467 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 IGHV2-5P01817 119 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 GIPP09681 153 aaPredicted RBP15.24■□□□□ 0.03
SNX17-201ENST00000233575 PPIAL4GP0DN37 164 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 ZNF16P17020 682 aaPredicted RBP15.24■□□□□ 0.03
SNX17-201ENST00000233575 HLA-GP17693 338 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 RPL39P5Q59GN2 51 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 OR2T35Q8NGX2 323 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 CLDND2Q8NHS1 167 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 TMEM222Q9H0R3 208 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 MED13LQ71F56 2210 aa15.24■□□□□ 0.03
SNX17-201ENST00000233575 ZFP36P26651 326 aaKnown RBP15.23■□□□□ 0.03
SNX17-201ENST00000233575 GPR12P47775 334 aa15.23■□□□□ 0.03
SNX17-201ENST00000233575 LYZL2Q7Z4W2 148 aa15.23■□□□□ 0.03
SNX17-201ENST00000233575 C8orf46Q8TAG6 207 aa15.23■□□□□ 0.03
SNX17-201ENST00000233575 ABCA12Q86UK0 2595 aa15.23■□□□□ 0.03
SNX17-201ENST00000233575 C13orf42A0A1B0GVH6 325 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 C17orf98A8MV24 154 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 H0Y980 276 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 IGHV1-8P0DP01 117 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 ESCO2Q56NI9 601 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 ODF3L1Q8IXM7 274 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 LY6G5BQ8NDX9 201 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 OR10A7Q8NGE5 316 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 MARVELD3Q96A59 401 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 OR10C1Q96KK4 312 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 METTL8Q9H825 291 aaKnown RBP15.22■□□□□ 0.03
SNX17-201ENST00000233575 RAB18Q9NP72 206 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 LINC00473A8K010 186 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 UCP1P25874 307 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 S100GP29377 79 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 LMO4P61968 165 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 TMEM268Q5VZI3 342 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 FAM219AQ8IW50 185 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 OR11H4Q8NGC9 324 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 FAM168AQ92567 244 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 C18orf12Q96KH6 178 aa15.22■□□□□ 0.03
SNX17-201ENST00000233575 MAP1AP78559 2803 aaPredicted RBP15.21■□□□□ 0.03
SNX17-201ENST00000233575 SAA2-SAA4A0A096LPE2 208 aa15.21■□□□□ 0.03
SNX17-201ENST00000233575 C5orf51A6NDU8 294 aa15.21■□□□□ 0.03
SNX17-201ENST00000233575 KIAA1324LA8MWY0 1029 aaPredicted RBP15.21■□□□□ 0.03
SNX17-201ENST00000233575 SAA2P0DJI9 122 aaPredicted RBP15.21■□□□□ 0.03
SNX17-201ENST00000233575 TMEM30BQ3MIR4 351 aa15.21■□□□□ 0.03
SNX17-201ENST00000233575 OR2B11Q5JQS5 317 aa15.21■□□□□ 0.03
SNX17-201ENST00000233575 SLC25A48Q6ZT89 311 aaKnown RBP15.21■□□□□ 0.03
SNX17-201ENST00000233575 LYG1Q8N1E2 194 aa15.21■□□□□ 0.03
SNX17-201ENST00000233575 SLC35G3Q8N808 338 aa15.21■□□□□ 0.03
SNX17-201ENST00000233575 LRTM2Q8N967 370 aa15.21■□□□□ 0.03
SNX17-201ENST00000233575 ZBTB34Q8NCN2 500 aa15.21■□□□□ 0.03
SNX17-201ENST00000233575 C10orf105Q8TEF2 133 aa15.21■□□□□ 0.03
SNX17-201ENST00000233575 PDCD10Q9BUL8 212 aa15.21■□□□□ 0.03
SNX17-201ENST00000233575 LOC105371242A0A075B767 164 aa15.21■□□□□ 0.02
SNX17-201ENST00000233575 ITGB1BP1O14713 200 aa15.21■□□□□ 0.02
SNX17-201ENST00000233575 C1QBP02746 253 aa15.21■□□□□ 0.02
SNX17-201ENST00000233575 BRWD1-AS2P59051 145 aa15.21■□□□□ 0.02
SNX17-201ENST00000233575 GGNBP1Q5YKI7 109 aa15.21■□□□□ 0.02
SNX17-201ENST00000233575 NOXA1Q86UR1 476 aa15.21■□□□□ 0.02
SNX17-201ENST00000233575 LGI3Q8N145 548 aa15.21■□□□□ 0.02
SNX17-201ENST00000233575 ONECUT1Q9UBC0 465 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms