RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 MMP24Q9Y5R2 645 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 IGHV1-3A0A0C4DH29 117 aa9.06□□□□□ -0.96
SF3B6-201ENST00000233468 CCDC160A6NGH7 325 aa9.06□□□□□ -0.96
SF3B6-201ENST00000233468 TIMM23O14925 209 aa9.06□□□□□ -0.96
SF3B6-201ENST00000233468 BET1O15155 118 aa9.06□□□□□ -0.96
SF3B6-201ENST00000233468 LANCL1O43813 399 aa9.06□□□□□ -0.96
SF3B6-201ENST00000233468 TSPAN9O75954 239 aa9.06□□□□□ -0.96
SF3B6-201ENST00000233468 PAX6P26367 422 aa9.06□□□□□ -0.96
SF3B6-201ENST00000233468 ZNF134P52741 427 aa9.06□□□□□ -0.96
SF3B6-201ENST00000233468 HES1Q14469 280 aa9.06□□□□□ -0.96
SF3B6-201ENST00000233468 GNMTQ14749 295 aa9.06□□□□□ -0.96
SF3B6-201ENST00000233468 DRAM1Q8N682 238 aa9.06□□□□□ -0.96
SF3B6-201ENST00000233468 RTN4IP1Q8WWV3 396 aaPredicted RBP9.06□□□□□ -0.96
SF3B6-201ENST00000233468 CABLES2Q9BTV7 478 aa9.06□□□□□ -0.96
SF3B6-201ENST00000233468 C16orf95Q9H693 158 aa9.06□□□□□ -0.96
SF3B6-201ENST00000233468 ZNF221Q9UK13 617 aa9.06□□□□□ -0.96
SF3B6-201ENST00000233468 RBM7Q9Y580 266 aaKnown RBP9.06□□□□□ -0.96
SF3B6-201ENST00000233468 TRBV6-7A0A0A0MS04 114 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 A0A1W2PPI3 338 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 CLPSL1A2RUU4 121 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 FAM90A9PA6NNJ1 464 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 FAM25AB3EWG3 89 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 FAM25CB3EWG5 89 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 FAM25GB3EWG6 89 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 SLC31A2O15432 143 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 TPPPO94811 219 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 OR2F2O95006 317 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 GSTT2P0CG29 244 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 GSTT2BP0CG30 244 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 CD1BP29016 333 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 ARPC4P59998 168 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 HABP2Q14520 560 aaPredicted RBP9.05□□□□□ -0.96
SF3B6-201ENST00000233468 UTF1Q5T230 341 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 CNIH2Q6PI25 160 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 IZUMO1Q8IYV9 350 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 OR2T10Q8NGZ9 312 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 OR56B4Q8NH76 319 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 OR2T6Q8NHC8 308 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 NUDCD2Q8WVJ2 157 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 ST6GALNAC6Q969X2 333 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 ISOC1Q96CN7 298 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 RBM14Q96PK6 669 aaKnown RBP9.05□□□□□ -0.96
SF3B6-201ENST00000233468 PRSS22Q9GZN4 317 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 TOLLIPQ9H0E2 274 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 IFT46Q9NQC8 304 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 RDH8Q9NYR8 311 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 CCDC59Q9P031 241 aaKnown RBP9.05□□□□□ -0.96
SF3B6-201ENST00000233468 RABL2AQ9UBK7 228 aaPredicted RBP9.05□□□□□ -0.96
SF3B6-201ENST00000233468 ZNF230Q9UIE0 474 aaPredicted RBP9.05□□□□□ -0.96
SF3B6-201ENST00000233468 RABL2BQ9UNT1 228 aa9.05□□□□□ -0.96
SF3B6-201ENST00000233468 ADARB2-AS1A8MUL3 147 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 RGS5O15539 181 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 SLC22A5O76082 557 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 SNRNP70P08621 437 aaKnown RBP9.04□□□□□ -0.96
SF3B6-201ENST00000233468 TMEM11P17152 192 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 PRSS3P35030 304 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 GPR12P47775 334 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 REG1BP48304 166 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 TAS2R20P59543 309 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 Q6ZPA2 131 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 ZNF833PQ6ZTB9 187 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 HOGA1Q86XE5 327 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 TMEM219Q86XT9 240 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.04□□□□□ -0.96
SF3B6-201ENST00000233468 OR8H1Q8NGG4 311 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 MAFIPQ8WZ33 124 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 CYYR1Q96J86 154 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 SLC25A33Q9BSK2 321 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 ZNF747Q9BV97 191 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 C11orf54Q9H0W9 315 aaPredicted RBP9.04□□□□□ -0.96
SF3B6-201ENST00000233468 IFI27L2Q9H2X8 130 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 SCPEP1Q9HB40 452 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 OR1A1Q9P1Q5 309 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 ANXA10Q9UJ72 324 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 MRPS7Q9Y2R9 242 aaKnown RBP9.04□□□□□ -0.96
SF3B6-201ENST00000233468 MOB4Q9Y3A3 225 aa9.04□□□□□ -0.96
SF3B6-201ENST00000233468 SAA2-SAA4A0A096LPE2 208 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 H3BMQ9 156 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 ZNF701M0R085 212 aaPredicted RBP9.03□□□□□ -0.96
SF3B6-201ENST00000233468 SULT1C2O00338 296 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 HPGDSO60760 199 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 PEX14O75381 377 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 MOSP00540 346 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 IGKV1D-33P01593 117 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 IGKV1-33P01594 117 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 SAA2P0DJI9 122 aaPredicted RBP9.03□□□□□ -0.96
SF3B6-201ENST00000233468 MC5RP33032 325 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 TAGLNQ01995 201 aaKnown RBP9.03□□□□□ -0.96
SF3B6-201ENST00000233468 DIAPH2-AS1Q14236 149 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 SPCS2Q15005 226 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 IGSF11Q5DX21 431 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 PRR31Q5SQ13 230 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 FAM53AQ6NSI3 398 aaPredicted RBP9.03□□□□□ -0.96
SF3B6-201ENST00000233468 Q6ZSV7 163 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 BEST4Q8NFU0 473 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 CFHR4Q92496 578 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 NECAP2Q9NVZ3 263 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 NDUFA13Q9P0J0 144 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 RSL24D1Q9UHA3 163 aaKnown RBP9.03□□□□□ -0.96
SF3B6-201ENST00000233468 ELF5Q9UKW6 265 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms