RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 ZNF596Q8TC21 504 aa12.46□□□□□ -0.41
PRDM4-201ENST00000228437 APH1AQ96BI3 265 aa12.46□□□□□ -0.41
PRDM4-201ENST00000228437 OR2J1Q9GZK6 312 aa12.46□□□□□ -0.41
PRDM4-201ENST00000228437 RPL36A-HNRNPH2H7BZ11 118 aa12.46□□□□□ -0.41
PRDM4-201ENST00000228437 CFIP05156 583 aa12.46□□□□□ -0.41
PRDM4-201ENST00000228437 ARL2-SNX15V9GYD0 113 aa12.46□□□□□ -0.41
PRDM4-201ENST00000228437 EP300Q09472 2414 aaPredicted RBP12.46□□□□□ -0.41
PRDM4-201ENST00000228437 EML5Q05BV3 1969 aa12.46□□□□□ -0.42
PRDM4-201ENST00000228437 CTXND1A0A1B0GTU2 59 aa12.46□□□□□ -0.42
PRDM4-201ENST00000228437 ATP5G3P48201 142 aa12.46□□□□□ -0.42
PRDM4-201ENST00000228437 OR2M3Q8NG83 312 aa12.46□□□□□ -0.42
PRDM4-201ENST00000228437 OR6C3Q9NZP0 311 aa12.46□□□□□ -0.42
PRDM4-201ENST00000228437 VAMP5O95183 116 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 TDGF1P3P51864 188 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 TRA2AQ13595 282 aaKnown RBP eCLIP12.45□□□□□ -0.42
PRDM4-201ENST00000228437 SPATA45Q537H7 98 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 POC1BQ8TC44 478 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 LIN7CQ9NUP9 197 aaKnown RBP12.45□□□□□ -0.42
PRDM4-201ENST00000228437 OR2W1Q9Y3N9 320 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 MARCH11A6NNE9 402 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 NAPSAO96009 420 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 SFTPCP11686 197 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 PSG4Q00888 419 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 AP1S3Q96PC3 154 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 CBR3O75828 277 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 CCL3P10147 92 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 PLGLB1Q02325 96 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 TMEM170AQ8WVE7 144 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 DERL1Q9BUN8 251 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 A0A0J9YW62 118 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 LILRA5A6NI73 299 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 HSBP1O75506 76 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 OR5G3P0C626 314 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 ARL16Q0P5N6 197 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 CATR1Q13166 79 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 RPS19BP1Q86WX3 136 aaKnown RBP12.45□□□□□ -0.42
PRDM4-201ENST00000228437 LYPD6Q86Y78 171 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 CISD2Q8N5K1 135 aaKnown RBP12.45□□□□□ -0.42
PRDM4-201ENST00000228437 OR2D2Q9H210 308 aa12.45□□□□□ -0.42
PRDM4-201ENST00000228437 AKIRIN1Q9H9L7 192 aaPredicted RBP12.45□□□□□ -0.42
PRDM4-201ENST00000228437 CER1O95813 267 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 RANP62826 216 aaKnown RBP12.44□□□□□ -0.42
PRDM4-201ENST00000228437 GCSAMLQ5JQS6 135 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 PRAMEF5Q5TYX0 476 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 PRAMEF6Q5VXH4 476 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 ZCCHC14Q8WYQ9 949 aaKnown RBP12.44□□□□□ -0.42
PRDM4-201ENST00000228437 POLR3KQ9Y2Y1 108 aaPredicted RBP12.44□□□□□ -0.42
PRDM4-201ENST00000228437 SERF1AO75920 110 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 OTX1P32242 354 aaPredicted RBP12.44□□□□□ -0.42
PRDM4-201ENST00000228437 SSR4P51571 173 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 CLDN15P56746 228 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 SERF2P84101 59 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 TFF3Q07654 80 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 Q56UQ5 140 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 TPRX1Q8N7U7 411 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 ABHD3Q8WU67 409 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 GNG12Q9UBI6 72 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 GTF3C1Q12789 2109 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 OR7C2O60412 319 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 IFI6P09912 130 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 ID3Q02535 119 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 ACSM6Q6P461 480 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 Q6ZVH6 145 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 FAM19A2Q8N3H0 131 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 RPP25LQ8N5L8 163 aaKnown RBP12.44□□□□□ -0.42
PRDM4-201ENST00000228437 SCRT1Q9BWW7 348 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 OBP2BQ9NPH6 170 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 USF3Q68DE3 2245 aa12.44□□□□□ -0.42
PRDM4-201ENST00000228437 APOA2P02652 100 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 FXYD3Q14802 87 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 HLA-DRB5Q30154 266 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 OR8I2Q8N0Y5 310 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 ZNF525Q8N782 197 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 WDR61Q9GZS3 305 aaKnown RBP12.43□□□□□ -0.42
PRDM4-201ENST00000228437 MRPL18Q9H0U6 180 aaKnown RBP12.43□□□□□ -0.42
PRDM4-201ENST00000228437 SLC35D1Q9NTN3 355 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 OR4A16Q8NH70 328 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 ZDHHC16Q969W1 377 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 P2RX4Q99571 388 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 GJE1A6NN92 205 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 MKRN2OSH3BPM6 223 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 ZG16O60844 167 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 ADMP35318 185 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 TCTAP57738 103 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 TDRG1Q3Y452 100 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 BEND2Q8NDZ0 799 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 ST6GALNAC6Q969X2 333 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 TMEM147Q9BVK8 224 aa12.43□□□□□ -0.42
PRDM4-201ENST00000228437 CNOT1A5YKK6 2376 aaKnown RBP12.42□□□□□ -0.42
PRDM4-201ENST00000228437 IGKV3D-11A0A0A0MRZ8 115 aa12.42□□□□□ -0.42
PRDM4-201ENST00000228437 CAMPP49913 170 aa12.42□□□□□ -0.42
PRDM4-201ENST00000228437 EXT1Q16394 746 aa12.42□□□□□ -0.42
PRDM4-201ENST00000228437 Q6ZRM9 215 aa12.42□□□□□ -0.42
PRDM4-201ENST00000228437 PNRC2Q9NPJ4 139 aaKnown RBP12.42□□□□□ -0.42
PRDM4-201ENST00000228437 RIF1Q5UIP0 2472 aaKnown RBP12.42□□□□□ -0.42
PRDM4-201ENST00000228437 LMO7DNF2Z398 122 aa12.42□□□□□ -0.42
PRDM4-201ENST00000228437 FGFRL1Q8N441 504 aa12.42□□□□□ -0.42
PRDM4-201ENST00000228437 HS3ST6Q96QI5 342 aa12.42□□□□□ -0.42
PRDM4-201ENST00000228437 NEU1Q99519 415 aa12.42□□□□□ -0.42
PRDM4-201ENST00000228437 ZNF331Q9NQX6 463 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms