RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 SP5Q6BEB4 398 aaPredicted RBP15.96■□□□□ 0.15
YBX3-201ENST00000228251 ALKBH2Q6NS38 261 aa15.96■□□□□ 0.15
YBX3-201ENST00000228251 MOGAT3Q86VF5 341 aa15.96■□□□□ 0.15
YBX3-201ENST00000228251 ITLN1Q8WWA0 313 aa15.96■□□□□ 0.15
YBX3-201ENST00000228251 RNF150Q9ULK6 438 aa15.96■□□□□ 0.15
YBX3-201ENST00000228251 TANC2Q9HCD6 1990 aa15.96■□□□□ 0.14
YBX3-201ENST00000228251 RP1L1Q8IWN7 2480 aaPredicted RBP15.96■□□□□ 0.14
YBX3-201ENST00000228251 TRIM77I1YAP6 450 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 WRBO00258 174 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 PRRG2O14669 202 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 MGST3O14880 152 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 CISD2Q8N5K1 135 aaKnown RBP15.95■□□□□ 0.14
YBX3-201ENST00000228251 COMMD1Q8N668 190 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 NUP37Q8NFH4 326 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 SCNM1Q9BWG6 230 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 TREM1Q9NP99 234 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 MMP24Q9Y5R2 645 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 SPTBN2O15020 2390 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 RAI1Q7Z5J4 1906 aaPredicted RBP15.95■□□□□ 0.14
YBX3-201ENST00000228251 ODAMA1E959 279 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 FAM90A26D6RGX4 464 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 SYNGR2O43760 224 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 RAMP3O60896 148 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 C1QL1O75973 258 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 ADH4P08319 380 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 SNCAP37840 140 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 DVL1P1P54792 670 aaPredicted RBP15.95■□□□□ 0.14
YBX3-201ENST00000228251 TAGLNQ01995 201 aaKnown RBP15.95■□□□□ 0.14
YBX3-201ENST00000228251 MIDNQ504T8 468 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 SVBPQ8N300 66 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 FGFRL1Q8N441 504 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 TCTEX1D1Q8N7M0 179 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 NCOR1P1Q9H4R4 102 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 C19orf12Q9NSK7 152 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 RFNGQ9Y644 331 aa15.95■□□□□ 0.14
YBX3-201ENST00000228251 DIDO1Q9BTC0 2240 aaKnown RBP15.94■□□□□ 0.14
YBX3-201ENST00000228251 FAM74A7A6NL05 159 aa15.94■□□□□ 0.14
YBX3-201ENST00000228251 CGB3P0DN86 165 aa15.94■□□□□ 0.14
YBX3-201ENST00000228251 CGB7P0DN87 165 aa15.94■□□□□ 0.14
YBX3-201ENST00000228251 ZNF16P17020 682 aaPredicted RBP15.94■□□□□ 0.14
YBX3-201ENST00000228251 SULT1A1P50225 295 aa15.94■□□□□ 0.14
YBX3-201ENST00000228251 FAM74A3Q4VXF1 159 aa15.94■□□□□ 0.14
YBX3-201ENST00000228251 VHLLQ6RSH7 139 aa15.94■□□□□ 0.14
YBX3-201ENST00000228251 FAM216AQ8WUB2 273 aa15.94■□□□□ 0.14
YBX3-201ENST00000228251 ESRP2Q9H6T0 727 aaKnown RBP15.94■□□□□ 0.14
YBX3-201ENST00000228251 ELOVL5Q9NYP7 299 aa15.94■□□□□ 0.14
YBX3-201ENST00000228251 CEP295Q9C0D2 2601 aa15.94■□□□□ 0.14
YBX3-201ENST00000228251 IGHV3OR15-7A0A075B7D8 119 aa15.93■□□□□ 0.14
YBX3-201ENST00000228251 F8W036 122 aa15.93■□□□□ 0.14
YBX3-201ENST00000228251 TOR1AO14656 332 aa15.93■□□□□ 0.14
YBX3-201ENST00000228251 SPRY3O43610 288 aa15.93■□□□□ 0.14
YBX3-201ENST00000228251 IGHV1-46P01743 117 aa15.93■□□□□ 0.14
YBX3-201ENST00000228251 TAS2R30P59541 319 aa15.93■□□□□ 0.14
YBX3-201ENST00000228251 RPL23AP62750 156 aaKnown RBP15.93■□□□□ 0.14
YBX3-201ENST00000228251 RNASE11Q8TAA1 199 aaKnown RBP15.93■□□□□ 0.14
YBX3-201ENST00000228251 NINJ1Q92982 152 aa15.93■□□□□ 0.14
YBX3-201ENST00000228251 ATP5SQ99766 215 aa15.93■□□□□ 0.14
YBX3-201ENST00000228251 C17orf98A8MV24 154 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 F2RL2O00254 374 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 SPINT2O43291 252 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 PROP1O75360 226 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 GZMHP20718 246 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 CAMLGP49069 296 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 ZNF66Q6ZN08 573 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 TMEM182Q6ZP80 229 aaPredicted RBP15.92■□□□□ 0.14
YBX3-201ENST00000228251 HAPLN4Q86UW8 402 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 ZNF808Q8N4W9 903 aaPredicted RBP15.92■□□□□ 0.14
YBX3-201ENST00000228251 Q8TCH9 128 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 HIPK2Q9H2X6 1198 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 GCM1Q9NP62 436 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 IL19Q9UHD0 177 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 NBEAQ8NFP9 2946 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 IGHV3-43A0A0B4J1X8 118 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 UMAD1C9J7I0 102 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 AGPAT2O15120 278 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 TSPAN15O95858 294 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 THBDP07204 575 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 IGHV3-43DP0DP04 118 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 CD80P33681 288 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 LOXL3P58215 753 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 CATR1Q13166 79 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 EDDM3AQ14507 147 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 TMEM217Q8N7C4 229 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 RFESDQ8TAC1 157 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 PPP1R35Q8TAP8 253 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 HSPB7Q9UBY9 170 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 JPT1Q9UK76 154 aa15.92■□□□□ 0.14
YBX3-201ENST00000228251 DYSFO75923 2080 aa15.91■□□□□ 0.14
YBX3-201ENST00000228251 LINC00473A8K010 186 aa15.91■□□□□ 0.14
YBX3-201ENST00000228251 C16orf97H3BN30 126 aa15.91■□□□□ 0.14
YBX3-201ENST00000228251 SFTA3P0C7M3 94 aa15.91■□□□□ 0.14
YBX3-201ENST00000228251 ARL16Q0P5N6 197 aa15.91■□□□□ 0.14
YBX3-201ENST00000228251 STUMQ69YW2 141 aa15.91■□□□□ 0.14
YBX3-201ENST00000228251 GFRALQ6UXV0 394 aa15.91■□□□□ 0.14
YBX3-201ENST00000228251 STX12Q86Y82 276 aa15.91■□□□□ 0.14
YBX3-201ENST00000228251 OR2G3Q8NGZ4 309 aa15.91■□□□□ 0.14
YBX3-201ENST00000228251 GNPNAT1Q96EK6 184 aaPredicted RBP15.91■□□□□ 0.14
YBX3-201ENST00000228251 SDSLQ96GA7 329 aa15.91■□□□□ 0.14
YBX3-201ENST00000228251 KCNJ16Q9NPI9 418 aa15.91■□□□□ 0.14
YBX3-201ENST00000228251 PIEZO2Q9H5I5 2752 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms