RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 FAM90A15PP0C7V4 464 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 FAM90A13PP0C7W8 464 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 FAM90A14PP0C7W9 464 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 FAM90A24PP0C7X0 464 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 AMTP48728 403 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 DLK1P80370 383 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 VAMP3Q15836 100 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 RPEL1Q2QD12 228 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 ANKRD55Q3KP44 614 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 FDX2Q6P4F2 183 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 ABHD14BQ96IU4 210 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 KCNAB3O43448 404 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 HPRT1P00492 218 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 SP9P0CG40 484 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 RCC1P18754 421 aaPredicted RBP9.93□□□□□ -0.82
NOD1-201ENST00000222823 PMS2P11Q13670 270 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 MRPL30Q8TCC3 161 aaKnown RBP9.93□□□□□ -0.82
NOD1-201ENST00000222823 Q8WTZ3 238 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 ITLN1Q8WWA0 313 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 DPF1Q92782 380 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 PRR19A6NJB7 356 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 B4DEV8 164 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 F5H697 171 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 ADAM11O75078 769 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 APELAP0DMC3 54 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 LTBRP36941 435 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 HNRNPA3P51991 378 aaKnown RBP9.93□□□□□ -0.82
NOD1-201ENST00000222823 RPS11P62280 158 aaKnown RBP eCLIP9.93□□□□□ -0.82
NOD1-201ENST00000222823 SERF2P84101 59 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 RUNX1Q01196 453 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 ZNF880Q6PDB4 577 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 STXBP6Q8NFX7 210 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 OR11H4Q8NGC9 324 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 NPDC1Q9NQX5 325 aaPredicted RBP9.93□□□□□ -0.82
NOD1-201ENST00000222823 OR5AC2Q9NZP5 309 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 PLXNB3Q9ULL4 1909 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 H3BQ15 152 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 TGFBR3LH3BV60 316 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 K7N7A8 449 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 DNASE2O00115 360 aaPredicted RBP9.92□□□□□ -0.82
NOD1-201ENST00000222823 ZNF253O75346 499 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 CRISP2P16562 243 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 ACP1P24666 158 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 P2RY4P51582 365 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 RSPO3Q9BXY4 272 aaPredicted RBP9.92□□□□□ -0.82
NOD1-201ENST00000222823 TMEM222Q9H0R3 208 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 PARD6AQ9NPB6 346 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 G6PC2Q9NQR9 355 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 AP4M1O00189 453 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 NEURL1O76050 574 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 Q5BKY6 102 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 DOLPP1Q86YN1 238 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 NUDT16L1Q9BRJ7 211 aaKnown RBP9.92□□□□□ -0.82
NOD1-201ENST00000222823 HSF4Q9ULV5 492 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 GAPDHP04406 335 aaKnown RBP9.92□□□□□ -0.82
NOD1-201ENST00000222823 COL8A1P27658 744 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 SRP14P37108 136 aaKnown RBP9.92□□□□□ -0.82
NOD1-201ENST00000222823 UBE2V2Q15819 145 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 TUSC1Q2TAM9 212 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 TMEM171Q8WVE6 324 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 AQP3Q92482 292 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 DLL3Q9NYJ7 618 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 CADP27708 2225 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 H0Y980 276 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 NMBP08949 121 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 PGA5P0DJD9 388 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 GPR6P46095 362 aaPredicted RBP9.92□□□□□ -0.82
NOD1-201ENST00000222823 COX19Q49B96 90 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 PPP1R32Q7Z5V6 425 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 ANAPC16Q96DE5 110 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 NPAS1Q99742 590 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 TMEM208Q9BTX3 173 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 RSRP1Q9BUV0 290 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 PKIBQ9C010 78 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 NPVFQ9HCQ7 196 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 ASCL3Q9NQ33 180 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 NAGKQ9UJ70 344 aa9.92□□□□□ -0.82
NOD1-201ENST00000222823 HELTA6NFD8 242 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 CD1BP29016 333 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 KHDC3LQ587J8 217 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 NSUN5P2Q63ZY6 315 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 OR8G5Q8NG78 346 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 DIRC2Q96SL1 478 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 SRXN1Q9BYN0 137 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 MS4A7Q9GZW8 240 aaPredicted RBP9.91□□□□□ -0.82
NOD1-201ENST00000222823 LPAR2Q9HBW0 351 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 COX5BP10606 129 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 NHLH1Q02575 133 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 FAM74A3Q4VXF1 159 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 TMEM255AQ5JRV8 349 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 C10orf113Q5VZT2 155 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 CCDC144NLQ6NUI1 221 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 ZNF788Q6ZQV5 615 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 PRDM14Q9GZV8 571 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 AKIRIN1Q9H9L7 192 aaPredicted RBP9.91□□□□□ -0.82
NOD1-201ENST00000222823 TCAPO15273 167 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 OR5AL1P0C617 328 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 CXorf66Q5JRM2 361 aaPredicted RBP9.91□□□□□ -0.82
NOD1-201ENST00000222823 ATP1A1-AS1Q5TC04 95 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 LAMTOR1Q6IAA8 161 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms